Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03120.t01
CDS Infomation

cds chromosome:12X:11:2501399:2503513:1 gene:VIT_11s0016g03120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAACTGGGAAAGCACTTCCCTGGTTAACAGCAAAGGGAGCTAAGGAAAGGAAAAGC
TCAGACAAAGTGGTGAATTTGAAAAATAATCAGTCTTATTGGGAGAAATCAGCTAAAAGG
TCAGAGAAAGTGACAACTGCAGAAACTAGTCGCTCTTCCTGGGAGGAATCAGCAGAAAGA
TTTGGGAAAAATCACAGTTCAAGGGAGCTTCTTCCAAAAAATGGTACACTTAGAGCGGGG
ACTGAGGGAAGTAAGAATATAATGGTAGACATGGTAGAGAGTCAGAAAAATGGTTATATG
GAGAGAGATGAAAGTGCTGAAGAAGAAATGGAGGTTATTGACGATCCAAGATGGGATAAG
ATTAAGAATAGGTATACGGAAACTGGGGATGTCAAAGGCAGATATGAGAGACCAGAATTA
CGAAGGTGGAATAAGCAGGAAAATTGGGGTAGAAAGACATGGAAAGAAGCTACTGAATCA
ACAATACCTAAGATTGTTGGTGAAGGAATTTATGGGGTTGGTCCTGTTCTCGCTGCATTG
TCTGCTGGAAGAAGAGAATTTTATGCATTGTATGTTCAAGAAGGATTGGATTTGAGTGGT
AATAATAGGAAGAAGAAGGACAAGAAAGGGTTTGAGAAGGTTTTGAAGCTAGCAGAAAAA
ATTGGTTTAAGCATTAAAGACTTATCAAAGCATGATCTCAATATGGTTGTTGATAACCGA
CCCCATCAGGGACTGGTGCTAGATGCTTCTCCATTGGAGATGGTAAAAATAAAGGAATTG
GACCCTGTTTTAACTGAGGGAGAGAAGGGTCCCTTATGGGTAGCACTGGACGAGGTTACA
GATCCTCAGAATTTGGGGGCAATTATTCGGTCTGCTTACTTTTTTGGAGTTTCAGGGGTG
GTATTATGTGCAAAGAACTCAGCTCCATTGAGTGGCGTTGTGAGCAAAGCAAGTGCAGGC
TCCCTCGAGTTGATGGAGCTCAGGTTTTGCAAGAATATGATGCAGTTCTTAACATCATCT
GCTGAAAATGGTTGGCAGGTTCTTGGAGGCTCAGTATCTCCAAGAGCAATTCCTTTGAAT
GAGATTTCACCTGGTGCACCCACAATTCTTGTTTTGGGCAGTGAGGGCACTGGGTTGAGA
CCTTTGGTGGAGAGGTCATGTACTCAGTTAATTAGGATCCCTGGAAACATTCCAGTGCAT
GTAACTGCAGGAGAAGTTGAAGATGTGGATACCTCAGAGATGGATCGTAGGTGCTTGACT
GAAGACTTCCAGTCCTTTTTGGCAGTTGAGAGTTTGAATGTCAGTGTTGCTGCTGGAGTG
CTTCTTCACCATTTGGTTGGGAATAGCTATGAAAACAATTGCCTCTTAGGCGATAAGCAA
GTCGATGCACTTCAATGA

Peptide Sequence

PEP ID

VIT_11s0016g03120.t01
PEP Infomation

pep chromosome:12X:11:2501399:2503513:1 gene:VIT_11s0016g03120 transcript:VIT_11s0016g03120.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRTGKALPWLTAKGAKERKSSDKVVNLKNNQSYWEKSAKRSEKVTTAETSRSSWEESAER
FGKNHSSRELLPKNGTLRAGTEGSKNIMVDMVESQKNGYMERDESAEEEMEVIDDPRWDK
IKNRYTETGDVKGRYERPELRRWNKQENWGRKTWKEATESTIPKIVGEGIYGVGPVLAAL
SAGRREFYALYVQEGLDLSGNNRKKKDKKGFEKVLKLAEKIGLSIKDLSKHDLNMVVDNR
PHQGLVLDASPLEMVKIKELDPVLTEGEKGPLWVALDEVTDPQNLGAIIRSAYFFGVSGV
VLCAKNSAPLSGVVSKASAGSLELMELRFCKNMMQFLTSSAENGWQVLGGSVSPRAIPLN
EISPGAPTILVLGSEGTGLRPLVERSCTQLIRIPGNIPVHVTAGEVEDVDTSEMDRRCLT
EDFQSFLAVESLNVSVAAGVLLHHLVGNSYENNCLLGDKQVDALQ

Transcript Sequence

Transcript ID

VIT_11s0016g03120.t01
Transcript Infomation

cdna chromosome:12X:11:2501399:2503513:1 gene:VIT_11s0016g03120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACGACGTCGTAAGTTACCTGAGCACGGGTTCACAGAGGAGGAGACGGCGCAGACTCGAGT
CATGGTTCTGGTTCAAATATGCAATCGAGAACTTTCTCAGTATTCCTCTTAACTTGTAAT
CAAGGTTAGATTTTTCTGTTTCTGAACTCCTTTACTTCAAGTTTTCAGATTCATCTTCTG
GAAAGTTTCTCCTTTTAATTCATACCATGTACTGTAATTTCACAAAGTGCCAGGCATTTC
CCTTGGCTATTAGGGTTTCATCACAGCCCATATGCTTCCGAAAATTCCACACATTGAAAA
CCCAGTTCTTGCCAATTGGATTTCATCCAAAACCCTCACAAAACCCCATTTTGGTGAAAT
GCGCAACCCTCTCATGTGGGTTTGGTTGCAAACCCCATGAGAACTCCCATTCGTTGAAAT
CCACTGGGATTTTGATTGAGTTGCATCATAAAGCCCTTGAAAAGGGCACAACAAGAAGAC
CCAGAAGCGTCTCCTGTGGATTTCGTCTCAAAAATGTTGTGCAAAGTTACAATTTTTTAA
GAGGTAGAAGTTTTTCGAGTTCATATTCTGTGAGAGTTGTTGGAGGCAGTGGTGCAATGA
GAACTGGGAAAGCACTTCCCTGGTTAACAGCAAAGGGAGCTAAGGAAAGGAAAAGCTCAG
ACAAAGTGGTGAATTTGAAAAATAATCAGTCTTATTGGGAGAAATCAGCTAAAAGGTCAG
AGAAAGTGACAACTGCAGAAACTAGTCGCTCTTCCTGGGAGGAATCAGCAGAAAGATTTG
GGAAAAATCACAGTTCAAGGGAGCTTCTTCCAAAAAATGGTACACTTAGAGCGGGGACTG
AGGGAAGTAAGAATATAATGGTAGACATGGTAGAGAGTCAGAAAAATGGTTATATGGAGA
GAGATGAAAGTGCTGAAGAAGAAATGGAGGTTATTGACGATCCAAGATGGGATAAGATTA
AGAATAGGTATACGGAAACTGGGGATGTCAAAGGCAGATATGAGAGACCAGAATTACGAA
GGTGGAATAAGCAGGAAAATTGGGGTAGAAAGACATGGAAAGAAGCTACTGAATCAACAA
TACCTAAGATTGTTGGTGAAGGAATTTATGGGGTTGGTCCTGTTCTCGCTGCATTGTCTG
CTGGAAGAAGAGAATTTTATGCATTGTATGTTCAAGAAGGATTGGATTTGAGTGGTAATA
ATAGGAAGAAGAAGGACAAGAAAGGGTTTGAGAAGGTTTTGAAGCTAGCAGAAAAAATTG
GTTTAAGCATTAAAGACTTATCAAAGCATGATCTCAATATGGTTGTTGATAACCGACCCC
ATCAGGGACTGGTGCTAGATGCTTCTCCATTGGAGATGGTAAAAATAAAGGAATTGGACC
CTGTTTTAACTGAGGGAGAGAAGGGTCCCTTATGGGTAGCACTGGACGAGGTTACAGATC
CTCAGAATTTGGGGGCAATTATTCGGTCTGCTTACTTTTTTGGAGTTTCAGGGGTGGTAT
TATGTGCAAAGAACTCAGCTCCATTGAGTGGCGTTGTGAGCAAAGCAAGTGCAGGCTCCC
TCGAGTTGATGGAGCTCAGGTTTTGCAAGAATATGATGCAGTTCTTAACATCATCTGCTG
AAAATGGTTGGCAGGTTCTTGGAGGCTCAGTATCTCCAAGAGCAATTCCTTTGAATGAGA
TTTCACCTGGTGCACCCACAATTCTTGTTTTGGGCAGTGAGGGCACTGGGTTGAGACCTT
TGGTGGAGAGGTCATGTACTCAGTTAATTAGGATCCCTGGAAACATTCCAGTGCATGTAA
CTGCAGGAGAAGTTGAAGATGTGGATACCTCAGAGATGGATCGTAGGTGCTTGACTGAAG
ACTTCCAGTCCTTTTTGGCAGTTGAGAGTTTGAATGTCAGTGTTGCTGCTGGAGTGCTTC
TTCACCATTTGGTTGGGAATAGCTATGAAAACAATTGCCTCTTAGGCGATAAGCAAGTCG
ATGCACTTCAATGAGATTCCGAGCCCTTGCATCAAACTATATATATATATGGCATTTGTA
GGGCCCTCCTGTAAGTTTCTGGAAGTAGATTACAAGGTTTATTTTCTTTTCATTACTTGA
TTGATTGGAAAGAAG