Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03100.t01
CDS Infomation

cds chromosome:12X:11:2487195:2488352:-1 gene:VIT_11s0016g03100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCACCGCTGCTGTCGCCGAGCCCGTTTCACCGTCCAACACCCGCGTCGGCTGGATT
GGAACCGGCGTGATGGGGCGGTCGATGTGCGCTCATCTGATGAAAGCGGGTTATACTGTA
ACTATCTTCAACCGCACCATCTCCAAGGCACAACCCCTCCTCGACATGGGGGCTCACCAC
GCCTCCTCTCCTCTCGCTCTCGCCTCCCAATCCGACGTCGTTTTCTCGATTGTCGGCTTC
CCCTCCGACGTCCGCTCCGTCCTCCTCGACCCCTCCTCCGGCGCCCTCTCCGGACTCCGC
CCCGGTGGAGTCCTCGTCGACATGACCACCTCTGATCCTTCACTCGCAGCCGAAATCGCC
TCCTCTGCTGCCTCCAGGGGCTGCTTCTCCGTTGACGCCCCCGTCTCCGGCGGAGACCGG
GGCGCCAAGAACGCCACCCTTGCTATCTTCGCCGGCGGGGACGAGTCCGTCGTCAGGCGC
CTGAACCCCTTATTTTCCCATCTGGGCAAGGTTAACTACATGGGTGGCCCTGGAAAAGGG
CAATACGCGAAGCTCGCGAACCAAATCATCATAGCTTCGACTATGCTTGGACTGATAGAA
GGGATGATGTATGCTTACAAGTCTGGTCTCGATGTGGCTTTGTTTTTGAACGCAATTTCC
ACCGGCGCTGCCGGCTCAAAGTCGTTGGATTTGTATGGGAGTAGGATTTTGAAGAGGGAT
TTCGAGGCTGGTTTCTTTGTGAATCACTTTGTTAAGGATTTGGGGATATGTTTGATTGAG
TGTCAAAAAATGGGGCTTTCTCTTCCTGGTTTGGCACTCGCTCAGCAGCTCTATCTCTCA
CTCAAGGCTCACGGGGAGGGCAATTTGGGTACCCAAGCTCTTATCTTGACGCTTGAGCGT
CTTAATAACGTTACTCTTCAACCTTCTTCTGCTCCTTCATCTTAG

Peptide Sequence

PEP ID

VIT_11s0016g03100.t01
PEP Infomation

pep chromosome:12X:11:2487195:2488352:-1 gene:VIT_11s0016g03100 transcript:VIT_11s0016g03100.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATAAVAEPVSPSNTRVGWIGTGVMGRSMCAHLMKAGYTVTIFNRTISKAQPLLDMGAHH
ASSPLALASQSDVVFSIVGFPSDVRSVLLDPSSGALSGLRPGGVLVDMTTSDPSLAAEIA
SSAASRGCFSVDAPVSGGDRGAKNATLAIFAGGDESVVRRLNPLFSHLGKVNYMGGPGKG
QYAKLANQIIIASTMLGLIEGMMYAYKSGLDVALFLNAISTGAAGSKSLDLYGSRILKRD
FEAGFFVNHFVKDLGICLIECQKMGLSLPGLALAQQLYLSLKAHGEGNLGTQALILTLER
LNNVTLQPSSAPSS

Transcript Sequence

Transcript ID

VIT_11s0016g03100.t01
Transcript Infomation

cdna chromosome:12X:11:2487195:2488352:-1 gene:VIT_11s0016g03100 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCCCACTCCCCATCCACTACAATACCCCTCACCGCCATTTCAATCGTCGCCCATCTCCGC
CGATCCATGGCCACCGCTGCTGTCGCCGAGCCCGTTTCACCGTCCAACACCCGCGTCGGC
TGGATTGGAACCGGCGTGATGGGGCGGTCGATGTGCGCTCATCTGATGAAAGCGGGTTAT
ACTGTAACTATCTTCAACCGCACCATCTCCAAGGCACAACCCCTCCTCGACATGGGGGCT
CACCACGCCTCCTCTCCTCTCGCTCTCGCCTCCCAATCCGACGTCGTTTTCTCGATTGTC
GGCTTCCCCTCCGACGTCCGCTCCGTCCTCCTCGACCCCTCCTCCGGCGCCCTCTCCGGA
CTCCGCCCCGGTGGAGTCCTCGTCGACATGACCACCTCTGATCCTTCACTCGCAGCCGAA
ATCGCCTCCTCTGCTGCCTCCAGGGGCTGCTTCTCCGTTGACGCCCCCGTCTCCGGCGGA
GACCGGGGCGCCAAGAACGCCACCCTTGCTATCTTCGCCGGCGGGGACGAGTCCGTCGTC
AGGCGCCTGAACCCCTTATTTTCCCATCTGGGCAAGGTTAACTACATGGGTGGCCCTGGA
AAAGGGCAATACGCGAAGCTCGCGAACCAAATCATCATAGCTTCGACTATGCTTGGACTG
ATAGAAGGGATGATGTATGCTTACAAGTCTGGTCTCGATGTGGCTTTGTTTTTGAACGCA
ATTTCCACCGGCGCTGCCGGCTCAAAGTCGTTGGATTTGTATGGGAGTAGGATTTTGAAG
AGGGATTTCGAGGCTGGTTTCTTTGTGAATCACTTTGTTAAGGATTTGGGGATATGTTTG
ATTGAGTGTCAAAAAATGGGGCTTTCTCTTCCTGGTTTGGCACTCGCTCAGCAGCTCTAT
CTCTCACTCAAGGCTCACGGGGAGGGCAATTTGGGTACCCAAGCTCTTATCTTGACGCTT
GAGCGTCTTAATAACGTTACTCTTCAACCTTCTTCTGCTCCTTCATCTTAGATTGGTTAG
TATGAGAATTTGATCTTGCTCTACTATTATTAGTGTAATGGGGTGCTTGCTTGGTTTAAT
TCAAGTTGTATGGATTCTGATAAACAATCTGGTAATTCCTTTGGACATCTTTTAATTGAG
CGTACAATAAATGTTTGC