Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03040.t01
CDS Infomation

cds chromosome:12X:11:2446664:2449892:1 gene:VIT_11s0016g03040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAATGTGAAAGTGAGAGCGAAACAATTTGGCTTGACAAAGCCAATTTCTTATGTG
AAACCTACAGATTTCCATATAAGAAGAAGTTTCGAATTAGAGAAAGTGTTGTGGGATGGT
GGGGTGTACCAAGTTGAGGAAGAAGCAAGGAAGAGGGAAGAGATTATTGAAAAGCTACGT
GTGGTTGTGAAGAGCTGGGTGAAGCAAGTAACTCGGTGGAAAGGATATACAGATAAAATG
GTCGAGAATGCCAATGCTTTGATTGTAACTTTTGGGTCATATCGGCTTGGGGTACATGGC
CCTGGATCAGACATTGATACGCTGTGTATTGGGCCATCCTATGTGAATCGGGAGGAAGAC
TTCTTCATTAGGTTGCATAATATCTTGATTGGTATGGAAGGAGTGTCGGAACTGCTACCA
ATCCCCCATGCCCATGTCCCAGTAATGAAGTTCAAGTTCGAGGGAGTATCAATTGATCTT
CTGTATGCAAGTGTCTCCCATTTGGTTGTTCCTGATGACTTAGATATCTCCAATGAATCT
ATACTATATGAAGCTGATGAGCCAACAGTTCGGAGTCTCAGCGGCTGCAGGGTTGCAGAC
CAAATTCTTCGACTTGTTCCAAATGTTGAACATTTTCGCACAACGCTCAGATGTTTGAAG
TTTTGGGCTAAAAGGCGCGGTGTTTATTCAAATGTTACCGGATTTCTTGGTGGGGTGAAT
TTGGCTCTTCTAGTTGCTCGTGTTTGCCAGCTTTATCCTAATGCAAATCCCAGTATGTTG
GTTTCGCGTTTCTTCAGAGTTTATACTCAGTGGCATTGGCCCAACCCTGTAATGCTGTGT
CCCATAGAAGACAAAGAGCTTGGTTTTCCAGTATGGGATCCTCGCAGAAACCCCTTGGAC
AGGAATCATCATATGCCAATCATCACACCAGCATACCCTAACATGAATTCCAGCTACAGT
GTTTCAACAAGTACTCTTGAGGCTATGATGAAGCAGTTCCACACCGCCAATAAAATCTGC
AATGACATTGAGCTCAATAAATCCAGCTGGGGTGCCCTGTTTGAGCCTTTCCTCTTCTTT
AGATCATACCAAAACTACCTCCAGGTTGACATAACTGCGACAGATGCTGATGATTTACGT
GCTTGGAAAGGTTGGGTGGAGTCCAGGTTGAGGCAGCTGACTCTAAAGGTAGAGCGATGT
ACAATTGGAAAGCTGCTATGCGTTCCATGTCCGCGTGAATACGTCGATACATCCAGGCAG
TGTTGCCATTGCACTTATTTCATGGGGTTGAGGAAGAAACCGGGAGTGGAGGTAGGAGAA
GTGATTGACATACGTGTGGCAACTCAGGAGTTCAAGGAAGAAATAGTAAACATGTTCTCG
TTCTGGACACCAGGAATGGAAATCCATGTATCTCATGTTCTCAAGAATCAGCTCCCATCT
TATGTTTTTCCAGATGAGTATAGAAAAAGGTCTCAGTCATCAAAGTCCATAAACCAGCAA
CATCAAAACAAGAGGAAAATAAATTCTGAGATGGTTGATGGGAAGCCCAGTGCTTCTGGG
TGTATGTCTGGTGGAATGTCAAACAGCTCCAGTCAGCTGAAGGCAGATATGGGATCATGC
AAGACTGGGTATAAGAGGAGAAGATTAACACCTGAAGAGGGTTCTTGTGAGGAGAGTAAA
GGGTTATCGGTATCAGAATCAGAATCAGAATCAGATGGGCTAGCAAAGGAAAAAGGCTCA
AGCTTATTGCAAAATGCCTTGCTGAAGGAGGTAGAGGTCTCTGAAAATTTTCTCTGA

Peptide Sequence

PEP ID

VIT_11s0016g03040.t01
PEP Infomation

pep chromosome:12X:11:2446664:2449892:1 gene:VIT_11s0016g03040 transcript:VIT_11s0016g03040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MENVKVRAKQFGLTKPISYVKPTDFHIRRSFELEKVLWDGGVYQVEEEARKREEIIEKLR
VVVKSWVKQVTRWKGYTDKMVENANALIVTFGSYRLGVHGPGSDIDTLCIGPSYVNREED
FFIRLHNILIGMEGVSELLPIPHAHVPVMKFKFEGVSIDLLYASVSHLVVPDDLDISNES
ILYEADEPTVRSLSGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVN
LALLVARVCQLYPNANPSMLVSRFFRVYTQWHWPNPVMLCPIEDKELGFPVWDPRRNPLD
RNHHMPIITPAYPNMNSSYSVSTSTLEAMMKQFHTANKICNDIELNKSSWGALFEPFLFF
RSYQNYLQVDITATDADDLRAWKGWVESRLRQLTLKVERCTIGKLLCVPCPREYVDTSRQ
CCHCTYFMGLRKKPGVEVGEVIDIRVATQEFKEEIVNMFSFWTPGMEIHVSHVLKNQLPS
YVFPDEYRKRSQSSKSINQQHQNKRKINSEMVDGKPSASGCMSGGMSNSSSQLKADMGSC
KTGYKRRRLTPEEGSCEESKGLSVSESESESDGLAKEKGSSLLQNALLKEVEVSENFL

Transcript Sequence

Transcript ID

VIT_11s0016g03040.t01
Transcript Infomation

cdna chromosome:12X:11:2446664:2449892:1 gene:VIT_11s0016g03040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAATGTGAAAGTGAGAGCGAAACAATTTGGCTTGACAAAGCCAATTTCTTATGTG
AAACCTACAGATTTCCATATAAGAAGAAGTTTCGAATTAGAGAAAGTGTTGTGGGATGGT
GGGGTGTACCAAGTTGAGGAAGAAGCAAGGAAGAGGGAAGAGATTATTGAAAAGCTACGT
GTGGTTGTGAAGAGCTGGGTGAAGCAAGTAACTCGGTGGAAAGGATATACAGATAAAATG
GTCGAGAATGCCAATGCTTTGATTGTAACTTTTGGGTCATATCGGCTTGGGGTACATGGC
CCTGGATCAGACATTGATACGCTGTGTATTGGGCCATCCTATGTGAATCGGGAGGAAGAC
TTCTTCATTAGGTTGCATAATATCTTGATTGGTATGGAAGGAGTGTCGGAACTGCTACCA
ATCCCCCATGCCCATGTCCCAGTAATGAAGTTCAAGTTCGAGGGAGTATCAATTGATCTT
CTGTATGCAAGTGTCTCCCATTTGGTTGTTCCTGATGACTTAGATATCTCCAATGAATCT
ATACTATATGAAGCTGATGAGCCAACAGTTCGGAGTCTCAGCGGCTGCAGGGTTGCAGAC
CAAATTCTTCGACTTGTTCCAAATGTTGAACATTTTCGCACAACGCTCAGATGTTTGAAG
TTTTGGGCTAAAAGGCGCGGTGTTTATTCAAATGTTACCGGATTTCTTGGTGGGGTGAAT
TTGGCTCTTCTAGTTGCTCGTGTTTGCCAGCTTTATCCTAATGCAAATCCCAGTATGTTG
GTTTCGCGTTTCTTCAGAGTTTATACTCAGTGGCATTGGCCCAACCCTGTAATGCTGTGT
CCCATAGAAGACAAAGAGCTTGGTTTTCCAGTATGGGATCCTCGCAGAAACCCCTTGGAC
AGGAATCATCATATGCCAATCATCACACCAGCATACCCTAACATGAATTCCAGCTACAGT
GTTTCAACAAGTACTCTTGAGGCTATGATGAAGCAGTTCCACACCGCCAATAAAATCTGC
AATGACATTGAGCTCAATAAATCCAGCTGGGGTGCCCTGTTTGAGCCTTTCCTCTTCTTT
AGATCATACCAAAACTACCTCCAGGTTGACATAACTGCGACAGATGCTGATGATTTACGT
GCTTGGAAAGGTTGGGTGGAGTCCAGGTTGAGGCAGCTGACTCTAAAGGTAGAGCGATGT
ACAATTGGAAAGCTGCTATGCGTTCCATGTCCGCGTGAATACGTCGATACATCCAGGCAG
TGTTGCCATTGCACTTATTTCATGGGGTTGAGGAAGAAACCGGGAGTGGAGGTAGGAGAA
GTGATTGACATACGTGTGGCAACTCAGGAGTTCAAGGAAGAAATAGTAAACATGTTCTCG
TTCTGGACACCAGGAATGGAAATCCATGTATCTCATGTTCTCAAGAATCAGCTCCCATCT
TATGTTTTTCCAGATGAGTATAGAAAAAGGTCTCAGTCATCAAAGTCCATAAACCAGCAA
CATCAAAACAAGAGGAAAATAAATTCTGAGATGGTTGATGGGAAGCCCAGTGCTTCTGGG
TGTATGTCTGGTGGAATGTCAAACAGCTCCAGTCAGCTGAAGGCAGATATGGGATCATGC
AAGACTGGGTATAAGAGGAGAAGATTAACACCTGAAGAGGGTTCTTGTGAGGAGAGTAAA
GGGTTATCGGTATCAGAATCAGAATCAGAATCAGATGGGCTAGCAAAGGAAAAAGGCTCA
AGCTTATTGCAAAATGCCTTGCTGAAGGAGGTAGAGGTCTCTGAAAATTTTCTCTGA