Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g03030.t01
CDS Infomation

cds chromosome:12X:11:2439159:2441045:-1 gene:VIT_11s0016g03030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAAGGGCAACAAGGTGGTTCAAGGGCTTGTTTGGGTTGAAGAGAGACAAGGAACAC
AAGGACAATTCAAATCCCGGCGACCGGAAGGACAAGAGTAGGTGGAGTTCTGGCCATTCC
GGGAGGGACTCCGTTGGGTTGTGTCACAATCCAACCACTATTCCGCCGAACATATCGGCG
GCGGAGGCAGCTTGGCTAAGATCTTACTACACCGACACTGAGAACGAGCAGAACAAGCAT
GCAATTGCAGTGGCTGCTGCCACGGCGGCGGCCGCCGACGCTGCCGTGGCTGCCGCTCAA
GCGGCGGTGGCCGTCGTCCGACTCACCAGCCACGGCAGAGGCACCATGTTCGGTGGTGGC
CGTGAGAGGTGGGGTGCTGTGAAGATTCAGACTGTTTTTCGAGGATACTTGGCGAGGAAA
GCCCTGAGAGCTCTGAAAGGACTGGTGAAGTTACAAGCGCTGGTCAGAGGCTATTTGGTG
AGGAAGCAAGCCACAGCCACACTTCACGGTATGCAGGCTCTGATAAGAGCCCAGGCCACA
GTTCGAGCCCAGAAAGCTCGAGAGCTGATCAGCAATGAGAAAAGATTCGAAATCCAAACT
AGAAAATCTATGGAAAGGTTTGATGAGAGTAGGAGTGAGCACACAGCATCAATCCACAGC
AGAAGGCTTTCAGCATCTCTCGACACTACTTTCAACGCCATTGATGGAAGCCCAAAGATT
GTGGAAGTTGATACTGGGAGGCCTAAGTCCAGATCCCGGAGAACCAACACATCGGTTTCA
GATTCAGGCGATGACCAGCATTACCAAACACTCTCCTCCCCCCTCCCATGTCGAACTCCA
ATTCCAGTTCCAGTCCGTTTATCAACACCCGATCACCGCAATTATCAAGACTCCGACTGG
GGTTTAACGGGTGACGAATGCAGGTTCTCTACTGCCCAAAGCACCCCTAGGTTTATGAAT
TCAGAAAGGTCCAATGTGCCGATTACACCGGCCAAGACCGTATGCGCTGACAGCTTCTTC
CGGCAGTACACAAATTTCCCAAATTACATGGCCAATACACAATCGTTTAAGGCTAAATTA
AGGTCTCACAGTGCTCCAAAACAACGGCCGGAGCCAGGGCCTAAGAAGAGGCTTTCACTC
AATGAAATGATGGAGTCAAGGAGCAGCCTAAGTGGGGTTAAGATGCAGAGATCATGCTCA
AGAGTTCAAGAAGCCATTAATTTTAAAAATGCTGTGATGGGGAAGCTTGAGAGACCCTCA
GAGATTGTTAGAGAGGCAGAGAGATGCAACTTGCAGAGGAGATGGTAA

Peptide Sequence

PEP ID

VIT_11s0016g03030.t01
PEP Infomation

pep chromosome:12X:11:2439159:2441045:-1 gene:VIT_11s0016g03030 transcript:VIT_11s0016g03030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGRATRWFKGLFGLKRDKEHKDNSNPGDRKDKSRWSSGHSGRDSVGLCHNPTTIPPNISA
AEAAWLRSYYTDTENEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGGG
RERWGAVKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHGMQALIRAQAT
VRAQKARELISNEKRFEIQTRKSMERFDESRSEHTASIHSRRLSASLDTTFNAIDGSPKI
VEVDTGRPKSRSRRTNTSVSDSGDDQHYQTLSSPLPCRTPIPVPVRLSTPDHRNYQDSDW
GLTGDECRFSTAQSTPRFMNSERSNVPITPAKTVCADSFFRQYTNFPNYMANTQSFKAKL
RSHSAPKQRPEPGPKKRLSLNEMMESRSSLSGVKMQRSCSRVQEAINFKNAVMGKLERPS
EIVREAERCNLQRRW

Transcript Sequence

Transcript ID

VIT_11s0016g03030.t01
Transcript Infomation

cdna chromosome:12X:11:2439159:2441045:-1 gene:VIT_11s0016g03030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGAATGGGAAGGGCAACAAGGTGGTTCAAGGGCTTGTTTGGGTTGAAGAGAGACAAGG
AACACAAGGACAATTCAAATCCCGGCGACCGGAAGGACAAGAGTAGGTGGAGTTCTGGCC
ATTCCGGGAGGGACTCCGTTGGGTTGTGTCACAATCCAACCACTATTCCGCCGAACATAT
CGGCGGCGGAGGCAGCTTGGCTAAGATCTTACTACACCGACACTGAGAACGAGCAGAACA
AGCATGCAATTGCAGTGGCTGCTGCCACGGCGGCGGCCGCCGACGCTGCCGTGGCTGCCG
CTCAAGCGGCGGTGGCCGTCGTCCGACTCACCAGCCACGGCAGAGGCACCATGTTCGGTG
GTGGCCGTGAGAGGTGGGGTGCTGTGAAGATTCAGACTGTTTTTCGAGGATACTTGGCGA
GGAAAGCCCTGAGAGCTCTGAAAGGACTGGTGAAGTTACAAGCGCTGGTCAGAGGCTATT
TGGTGAGGAAGCAAGCCACAGCCACACTTCACGGTATGCAGGCTCTGATAAGAGCCCAGG
CCACAGTTCGAGCCCAGAAAGCTCGAGAGCTGATCAGCAATGAGAAAAGATTCGAAATCC
AAACTAGAAAATCTATGGAAAGGTTTGATGAGAGTAGGAGTGAGCACACAGCATCAATCC
ACAGCAGAAGGCTTTCAGCATCTCTCGACACTACTTTCAACGCCATTGATGGAAGCCCAA
AGATTGTGGAAGTTGATACTGGGAGGCCTAAGTCCAGATCCCGGAGAACCAACACATCGG
TTTCAGATTCAGGCGATGACCAGCATTACCAAACACTCTCCTCCCCCCTCCCATGTCGAA
CTCCAATTCCAGTTCCAGTCCGTTTATCAACACCCGATCACCGCAATTATCAAGACTCCG
ACTGGGGTTTAACGGGTGACGAATGCAGGTTCTCTACTGCCCAAAGCACCCCTAGGTTTA
TGAATTCAGAAAGGTCCAATGTGCCGATTACACCGGCCAAGACCGTATGCGCTGACAGCT
TCTTCCGGCAGTACACAAATTTCCCAAATTACATGGCCAATACACAATCGTTTAAGGCTA
AATTAAGGTCTCACAGTGCTCCAAAACAACGGCCGGAGCCAGGGCCTAAGAAGAGGCTTT
CACTCAATGAAATGATGGAGTCAAGGAGCAGCCTAAGTGGGGTTAAGATGCAGAGATCAT
GCTCAAGAGTTCAAGAAGCCATTAATTTTAAAAATGCTGTGATGGGGAAGCTTGAGAGAC
CCTCAGAGATTGTTAGAGAGGCAGAGAGATGCAACTTGCAGAGGAGATGGTAAATATGTA
TACATATAGAGAAGAAACGATGATGAGAGGTAAACCACTGCTTGTGTGCTATGTTGTTTA
TTGCTCCAGTTGGGTCTCTCAGATGTGCAAGTTTGAAAAGGAATAGGTGACAAAAACAGA
AAACAATGTGTGTAAATTAAGTAATTTACAGGTGATCTT