Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g02990.t01
CDS Infomation

cds chromosome:12X:11:2391718:2406810:1 gene:VIT_11s0016g02990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTGCAACATTTGCCCTCCTACACCCGCCGGCATCTCCTCTTCCTCCGTTCCTCTCC
TTCAGTCGAGTCTCTCATTTCCACTCTCCTCCGCCGCTCTCCACCGCCGATTTTTGGAGG
CTGACATCTAGAAGATCTGTTCCGATATCTAAGACTTCAATATCAACAATGACAAATGAT
GAAGAAAATGCAGGCACTGTAAAGAAACAGTTATCTAAATTATTTGAGCAATCACTTAGA
ATAACCGTCCCTTCTGAGTCAGATGTGGAGCCTTTGATTGCTGCTTGCGCTCCAAAGTTT
GGGGATTACCAATGTAATAATGCCATGGGTCTATGGTCAAGAATCAAAAATAAAAAGGAC
AATGGATTTAAGGGTCCCCCAACTATAGGAAAGGTCATCATGGAAAATCTCCCTCCAACT
GAAATGATTGAAAAATGCACCCTTGCAGGGCCTGGTTGGATAGCTAAGAACATTCAAAAA
ATGCTAATTATTGGCATTGAAACATGGGCACCAAGGCTTCCGATCAAAAGGGCAGTGGTT
GACTTTTCCTCACCCAATATAGCAAAAGAAATGCATGTTGGCCACTTAAGATCTACTATT
ATTGGAGATACTTTAGCTCGTATGCTTGAGTTTTCAAATGTTGATGTGCTGCGGCGAAAC
CATGTCGGCGATTGGGGTACACAGTTTGGTATGCTGATTGAATTCCTCTTTGACAAGTTC
CCAAACTGGGAACATGCAAGTGCACAAGCCATTGGAGATCTACAGGAATTCTACAAGGCA
TCAAAAAAGAGATTTGACGAGGATCCTGCTTTTAAGGGGAGAGCACAACAGGCAGTGGTC
CGTCTGCAGGGTGGGGAAACCAGCTATCGTAGGGCATGGGCACAAATCTGTGAAATAAGT
CGAAATGAATTCAATAAAGTTTATCAACGCCTTGGAGTTCAGTTAGAGGAAAAGGGAGAA
AGCTTTTACAATCCATATATCCCTGGAGTTATAGAGCAATTGAGTAATCAAGGGTTAGTT
GAAGAAAGTCAGGGTGCCCGTGTGATCCACATTGAAGGGGTGAATATACCTCTTATTGTT
GTGAAAAGTGATGGCGGTTACAACTATGCTTCAACTGATATGGCAGCTCTTTGGTATCGC
CTTAATGAAGAAAAAGCTGAATGGATTATATATGTTACTGATGTTGGCCAACAACAGCAC
TTTGAAATGGTATTCAGTGCTGCCAAACTTGCAGGTTGGCTTCCAGCCAATGATAATATG
TACCCCAAAGCTAGCCATGTTGGTTTTGGTCTTGTTCTTGGAGAAGATGGCAAGCGCTTT
CGAACTCGCAATACTGAAGTAGTTCGATTAGTTGATTTACTTGATGAAGCCAAGAATCGC
AGTAAATCTGTACTTATTGAACGTGGTAAGGCTGCCGAATGGACTGAGCAGGAGCTTGAG
CACACAGCAGAGGCAGTTGGTTATGGGGCTGTTAAATATGCGGACTTGAAGAACAACAGA
TTGACTAATTACACATTTAATTTTGATCAGATGCTTAATGATAAAGGAAATACTGCTGTT
TATTTGTTGTATGCACATGCTCGAATCTGTTCAATCATTAGGAAATCTGGTAAAGACATT
GATGAGTTAAAAAAGACGGGAGTGCTAACATTGGACCATGATGATGAACGTGGATTGGGC
CTTCACTTACTCCAATTTTCGGAGGTTGTCGAAGAGGCTTGCACCAATCTCTTGCCAAAT
GTTTTGTGTGAATATCTTTACAATTTATCAGAAAATTTCACAAAATTCTATTCCAACTGT
CAGGTTGTTGGATCAGCAGAGGAAACAAGCAGACTTTTGCTATGTGAAGCAACGGCTGTG
GTCATGAGGAAGTGCTTCCATCTCCTTGGCATCACACCTGTCTACAAAATATGA

Peptide Sequence

PEP ID

VIT_11s0016g02990.t01
PEP Infomation

pep chromosome:12X:11:2391718:2406810:1 gene:VIT_11s0016g02990 transcript:VIT_11s0016g02990.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSATFALLHPPASPLPPFLSFSRVSHFHSPPPLSTADFWRLTSRRSVPISKTSISTMTND
EENAGTVKKQLSKLFEQSLRITVPSESDVEPLIAACAPKFGDYQCNNAMGLWSRIKNKKD
NGFKGPPTIGKVIMENLPPTEMIEKCTLAGPGWIAKNIQKMLIIGIETWAPRLPIKRAVV
DFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVDVLRRNHVGDWGTQFGMLIEFLFDKF
PNWEHASAQAIGDLQEFYKASKKRFDEDPAFKGRAQQAVVRLQGGETSYRRAWAQICEIS
RNEFNKVYQRLGVQLEEKGESFYNPYIPGVIEQLSNQGLVEESQGARVIHIEGVNIPLIV
VKSDGGYNYASTDMAALWYRLNEEKAEWIIYVTDVGQQQHFEMVFSAAKLAGWLPANDNM
YPKASHVGFGLVLGEDGKRFRTRNTEVVRLVDLLDEAKNRSKSVLIERGKAAEWTEQELE
HTAEAVGYGAVKYADLKNNRLTNYTFNFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDI
DELKKTGVLTLDHDDERGLGLHLLQFSEVVEEACTNLLPNVLCEYLYNLSENFTKFYSNC
QVVGSAEETSRLLLCEATAVVMRKCFHLLGITPVYKI

Transcript Sequence

Transcript ID

VIT_11s0016g02990.t01
Transcript Infomation

cdna chromosome:12X:11:2391718:2406810:1 gene:VIT_11s0016g02990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGGGGCGGAATCACAGACAAAAAAAGAAACGGTAGGGCATTATTGGGTAGAATAGCAAA
AATATATATAAAGGTAATGTCTGCAACATTTGCCCTCCTACACCCGCCGGCATCTCCTCT
TCCTCCGTTCCTCTCCTTCAGTCGAGTCTCTCATTTCCACTCTCCTCCGCCGCTCTCCAC
CGCCGATTTTTGGAGGCTGACATCTAGAAGATCTGTTCCGATATCTAAGACTTCAATATC
AACAATGACAAATGATGAAGAAAATGCAGGCACTGTAAAGAAACAGTTATCTAAATTATT
TGAGCAATCACTTAGAATAACCGTCCCTTCTGAGTCAGATGTGGAGCCTTTGATTGCTGC
TTGCGCTCCAAAGTTTGGGGATTACCAATGTAATAATGCCATGGGTCTATGGTCAAGAAT
CAAAAATAAAAAGGACAATGGATTTAAGGGTCCCCCAACTATAGGAAAGGTCATCATGGA
AAATCTCCCTCCAACTGAAATGATTGAAAAATGCACCCTTGCAGGGCCTGGTTGGATAGC
TAAGAACATTCAAAAAATGCTAATTATTGGCATTGAAACATGGGCACCAAGGCTTCCGAT
CAAAAGGGCAGTGGTTGACTTTTCCTCACCCAATATAGCAAAAGAAATGCATGTTGGCCA
CTTAAGATCTACTATTATTGGAGATACTTTAGCTCGTATGCTTGAGTTTTCAAATGTTGA
TGTGCTGCGGCGAAACCATGTCGGCGATTGGGGTACACAGTTTGGTATGCTGATTGAATT
CCTCTTTGACAAGTTCCCAAACTGGGAACATGCAAGTGCACAAGCCATTGGAGATCTACA
GGAATTCTACAAGGCATCAAAAAAGAGATTTGACGAGGATCCTGCTTTTAAGGGGAGAGC
ACAACAGGCAGTGGTCCGTCTGCAGGGTGGGGAAACCAGCTATCGTAGGGCATGGGCACA
AATCTGTGAAATAAGTCGAAATGAATTCAATAAAGTTTATCAACGCCTTGGAGTTCAGTT
AGAGGAAAAGGGAGAAAGCTTTTACAATCCATATATCCCTGGAGTTATAGAGCAATTGAG
TAATCAAGGGTTAGTTGAAGAAAGTCAGGGTGCCCGTGTGATCCACATTGAAGGGGTGAA
TATACCTCTTATTGTTGTGAAAAGTGATGGCGGTTACAACTATGCTTCAACTGATATGGC
AGCTCTTTGGTATCGCCTTAATGAAGAAAAAGCTGAATGGATTATATATGTTACTGATGT
TGGCCAACAACAGCACTTTGAAATGGTATTCAGTGCTGCCAAACTTGCAGGTTGGCTTCC
AGCCAATGATAATATGTACCCCAAAGCTAGCCATGTTGGTTTTGGTCTTGTTCTTGGAGA
AGATGGCAAGCGCTTTCGAACTCGCAATACTGAAGTAGTTCGATTAGTTGATTTACTTGA
TGAAGCCAAGAATCGCAGTAAATCTGTACTTATTGAACGTGGTAAGGCTGCCGAATGGAC
TGAGCAGGAGCTTGAGCACACAGCAGAGGCAGTTGGTTATGGGGCTGTTAAATATGCGGA
CTTGAAGAACAACAGATTGACTAATTACACATTTAATTTTGATCAGATGCTTAATGATAA
AGGAAATACTGCTGTTTATTTGTTGTATGCACATGCTCGAATCTGTTCAATCATTAGGAA
ATCTGGTAAAGACATTGATGAGTTAAAAAAGACGGGAGTGCTAACATTGGACCATGATGA
TGAACGTGGATTGGGCCTTCACTTACTCCAATTTTCGGAGGTTGTCGAAGAGGCTTGCAC
CAATCTCTTGCCAAATGTTTTGTGTGAATATCTTTACAATTTATCAGAAAATTTCACAAA
ATTCTATTCCAACTGTCAGGTTGTTGGATCAGCAGAGGAAACAAGCAGACTTTTGCTATG
TGAAGCAACGGCTGTGGTCATGAGGAAGTGCTTCCATCTCCTTGGCATCACACCTGTCTA
CAAAATATGACATGCTTATTATATAATTTTTGAGCCCATTATTAGAAGTTTTCAATGCTT
GGCTTGAGTAATCCACTAAATTGTATACACACTGCAGTTAGAGCAATTTTAGAGG