Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g02970.t01
CDS Infomation

cds chromosome:12X:11:2377706:2381306:1 gene:VIT_11s0016g02970 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGAGCAAGAAGCCACTGAAGCAACTGAAGCTCTCTGTTCCTGCTCAAGAAACCCCT
ATCACCAGTTTCTTGACTGCAAGTGGCACATTTCAGGATGGTGATCTGCTCTTAAACCAG
AAGGGTTTGCGGCTTATCTCTGAGGAGAAAGAACCTCGTCCTTCAGAGGCTAAGGAGCTT
GATGTACAATTTTCATTGGAAGATCTTGAGACCATCAAAGTCATTGGAAAGGGAAGTGGA
GGTGTTGTTCAACTTGTTCGCCACAAATGGGTTGGAACATTATTTGCCTTGAAGGTCATC
CAGATGAATATACAAGAGAATTTCCGCAAACAAATTGTGCAGGAGCTGAAGATAAATCAA
GCATCACAATGTTCACATATTGTTGTTTGCTACCATTCGTTCTATCACAATGGAGTCATC
TCTCTTGTCCTGGAATACATGGATCGTGGATCTTTGGTTGATGTGATCAGACAGGTCAAA
ACAATCCTTGAACCATATCTTGCTGTTCTTTGTAAGCAGGTTTTACAAGGTCTTGTGTAC
TTGCACCATGAAAGACACGTAATTCATAGGGACATAAAACCATCCAACCTGCTGGTAAAC
CACAAAGGGGAAGTAAAGATTACAGATTTTGGTGTGAGTGCTATGCTAGGTAGCTCTATG
GGTCAGAGGGACACGTTTGTTGGGACTTACAATTACATGTCGCCTGAGAGAATTAAAGGA
AGCACTTATGACTACAGCAGTGATATTTGGAGTCTGGGCATGGTAGCACTTGAATGTGCT
ATTGGACATTTTCCTTATATGCAATCTGAAGACCAGCAAAGCGGGCCAAGCTTTTATGAG
CTCTTAGAGGCAATTGTGGAAAGCCCACCACCATCTGCTCCCCCAGATCAATTCTCTCCA
GAATTTTGTTCTTTTATATCTGCCTGCATACAGAAGAACCCTCAAGACCGATTGTCATCA
TTAGACCTCGTGAGTCACCCTTTCATCAAAAAGTTTGAAGACAAGGACATTGATCTCGAA
ATTCTGGTAGGCAGCTTGGAACCTCCTGTAAATTTCCCAAGATAG

Peptide Sequence

PEP ID

VIT_11s0016g02970.t01
PEP Infomation

pep chromosome:12X:11:2377706:2381306:1 gene:VIT_11s0016g02970 transcript:VIT_11s0016g02970.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKSKKPLKQLKLSVPAQETPITSFLTASGTFQDGDLLLNQKGLRLISEEKEPRPSEAKEL
DVQFSLEDLETIKVIGKGSGGVVQLVRHKWVGTLFALKVIQMNIQENFRKQIVQELKINQ
ASQCSHIVVCYHSFYHNGVISLVLEYMDRGSLVDVIRQVKTILEPYLAVLCKQVLQGLVY
LHHERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLGSSMGQRDTFVGTYNYMSPERIKG
STYDYSSDIWSLGMVALECAIGHFPYMQSEDQQSGPSFYELLEAIVESPPPSAPPDQFSP
EFCSFISACIQKNPQDRLSSLDLVSHPFIKKFEDKDIDLEILVGSLEPPVNFPR

Transcript Sequence

Transcript ID

VIT_11s0016g02970.t01
Transcript Infomation

cdna chromosome:12X:11:2377706:2381306:1 gene:VIT_11s0016g02970 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTCTCTCTCACTCGAAAACCCTAGAGAGAAACCCTAATCACAATGAAGAGCAAGAAGCC
ACTGAAGCAACTGAAGCTCTCTGTTCCTGCTCAAGAAACCCCTATCACCAGTTTCTTGAC
TGCAAGTGGCACATTTCAGGATGGTGATCTGCTCTTAAACCAGAAGGGTTTGCGGCTTAT
CTCTGAGGAGAAAGAACCTCGTCCTTCAGAGGCTAAGGAGCTTGATGTACAATTTTCATT
GGAAGATCTTGAGACCATCAAAGTCATTGGAAAGGGAAGTGGAGGTGTTGTTCAACTTGT
TCGCCACAAATGGGTTGGAACATTATTTGCCTTGAAGGTCATCCAGATGAATATACAAGA
GAATTTCCGCAAACAAATTGTGCAGGAGCTGAAGATAAATCAAGCATCACAATGTTCACA
TATTGTTGTTTGCTACCATTCGTTCTATCACAATGGAGTCATCTCTCTTGTCCTGGAATA
CATGGATCGTGGATCTTTGGTTGATGTGATCAGACAGGTCAAAACAATCCTTGAACCATA
TCTTGCTGTTCTTTGTAAGCAGGTTTTACAAGGTCTTGTGTACTTGCACCATGAAAGACA
CGTAATTCATAGGGACATAAAACCATCCAACCTGCTGGTAAACCACAAAGGGGAAGTAAA
GATTACAGATTTTGGTGTGAGTGCTATGCTAGGTAGCTCTATGGGTCAGAGGGACACGTT
TGTTGGGACTTACAATTACATGTCGCCTGAGAGAATTAAAGGAAGCACTTATGACTACAG
CAGTGATATTTGGAGTCTGGGCATGGTAGCACTTGAATGTGCTATTGGACATTTTCCTTA
TATGCAATCTGAAGACCAGCAAAGCGGGCCAAGCTTTTATGAGCTCTTAGAGGCAATTGT
GGAAAGCCCACCACCATCTGCTCCCCCAGATCAATTCTCTCCAGAATTTTGTTCTTTTAT
ATCTGCCTGCATACAGAAGAACCCTCAAGACCGATTGTCATCATTAGACCTCGTGAGTCA
CCCTTTCATCAAAAAGTTTGAAGACAAGGACATTGATCTCGAAATTCTGGTAGGCAGCTT
GGAACCTCCTGTAAATTTCCCAAGATAGTTTGTCTTGTAATAGTAT