Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g02960.t01
CDS Infomation

cds chromosome:12X:11:2371104:2375284:-1 gene:VIT_11s0016g02960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAAGGGGGTTTAGGCTCATTTTTGCCACTTCACTGCTTCTCACGCTTCTGGGTCTG
TGCAGGGGAAGCACGATTGGGGTTTGCTATGGGAGAAATGCAGATGACCTCCCCACACCA
GATAAAGTAGCACAGCTGGTTCAGCTTCACAAGATTAAATATTTGAGGATTTATGACTCT
AATATTCAGGTTCTTAAGGCCTTTGCTAACACTGGGGTTGAACTCATGATTGGGATTTCG
AATTCAGACTTACTCCCATTTTCCCAGTTCCAGTCTAATGCAGACACTTGGCTGAGGAAT
AGTATTCTTCCATACTACCCAGCCACAAGGATCACACACATAACTGTCGGTGCTGAAGTC
ACAGAAAGCCCCAATAATGCCTCTTCTATGGTGGTACCTGCCATGAAAAATGTCCTCACA
GCTCTACGAAAAGCTGGTCTGCATAAGAAGATCAAAGTTTCAAGTACCCATTCCCTAGGG
ATTTTGTCTCGGTCATTCCCACCCTCTGCAGGGGCTTTTAATAGCAGCCATGCATTCTTT
CTCAAACCCATGTTGGAATTTCTTGCTGAGAATCAGTCTCCTTTCATGGTTGATATCTAT
CCTTACTATGCCTACAGAGATTCCCCAAACAACGTGTCTCTAGACTATGCTCTATTTGAG
TCATCCTCAGAAGTTATTGATCCAAACACTGGTTTGCTTTACACTAACATGTTTGATGCT
CAAATTGATGCTCTATATTTTGCATTGATGGCTCTTAATTTCAGAACAATTAAAATTATG
GTCACTGAGACAGGCTGGCCTTCAAAAGGATCTCCCAAGGAGACAGCTGCAACTCCTGAT
AATGCTCAGACTTATAACACCAATCTCATCCGTCACGTCATCAATGACACCGGCACTCCT
GCAAAGCCAGGAGAGGATCTAGATGTGTATATCTTCTCATTGTTCAATGAGAACAGGAAG
TCTGGTTTGGAATCTGAAAGGAACTGGGGGTTATTTTATCCAGATCAAACAAGTGTTTAT
AACTTGGATATGACCGGAAAGGGTGCTGTAACCATGACTACAGAAACAAATGTAACAAGC
TCAAATGGAACATGGTGTATCGCATCGTCTACCGCTTCAGAAATGGACTTGCAGAATGCC
TTAGATTGGGCTTGTGGTCCTGGGAATGTGGACTGCTCTGCTATTCAGCCTAGCCAGCCT
TGTTTTGAACCAGATAATGTAGTTTCCCATGCATCTTTTGCATTCAACAGTTACTACCAG
CAAAATGGAGCTACTGATATTGCTTGCAGTTTTGGAGGGTCAGGAATCAAAGTTAATAAG
AACCCAAGTTATGATAACTGCTTGTATATGACAACAGGGAGCAACAAAACTGCTGCAAGT
AATGCAACAACAGCCCTTGCTTCAACCACCACTTCCTCTGCAGCGAATGCGTTGTTTGCT
TGGACACTGAGTTGCCTGCTTATGGCTCTGCTCTCATTTCTCTAA

Peptide Sequence

PEP ID

VIT_11s0016g02960.t01
PEP Infomation

pep chromosome:12X:11:2371104:2375284:-1 gene:VIT_11s0016g02960 transcript:VIT_11s0016g02960.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MARGFRLIFATSLLLTLLGLCRGSTIGVCYGRNADDLPTPDKVAQLVQLHKIKYLRIYDS
NIQVLKAFANTGVELMIGISNSDLLPFSQFQSNADTWLRNSILPYYPATRITHITVGAEV
TESPNNASSMVVPAMKNVLTALRKAGLHKKIKVSSTHSLGILSRSFPPSAGAFNSSHAFF
LKPMLEFLAENQSPFMVDIYPYYAYRDSPNNVSLDYALFESSSEVIDPNTGLLYTNMFDA
QIDALYFALMALNFRTIKIMVTETGWPSKGSPKETAATPDNAQTYNTNLIRHVINDTGTP
AKPGEDLDVYIFSLFNENRKSGLESERNWGLFYPDQTSVYNLDMTGKGAVTMTTETNVTS
SNGTWCIASSTASEMDLQNALDWACGPGNVDCSAIQPSQPCFEPDNVVSHASFAFNSYYQ
QNGATDIACSFGGSGIKVNKNPSYDNCLYMTTGSNKTAASNATTALASTTTSSAANALFA
WTLSCLLMALLSFL

Transcript Sequence

Transcript ID

VIT_11s0016g02960.t01
Transcript Infomation

cdna chromosome:12X:11:2371104:2375284:-1 gene:VIT_11s0016g02960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTGATGCCAACACAAAGCGCCTCGCCCTCTCTCTCTCTCTCTTCGTACAATCTCGATA
ATCTATGCATCTTTCTCTCCTCTCCAGCTCCCAGAGGTAGAGTGAGAGTAGTGAGAGTAG
GAGAGAGCCGTTGGGGGATGAACGTTGGACTGGGTGGAGAGACGCTACTCAAAAGAGTAA
AGCTCTGATAACGAAAAGGAGGAGGGGGAGAAGGAGAAAGCACTGTGATAGAGGAATGGC
AAGGGGGTTTAGGCTCATTTTTGCCACTTCACTGCTTCTCACGCTTCTGGGTCTGTGCAG
GGGAAGCACGATTGGGGTTTGCTATGGGAGAAATGCAGATGACCTCCCCACACCAGATAA
AGTAGCACAGCTGGTTCAGCTTCACAAGATTAAATATTTGAGGATTTATGACTCTAATAT
TCAGGTTCTTAAGGCCTTTGCTAACACTGGGGTTGAACTCATGATTGGGATTTCGAATTC
AGACTTACTCCCATTTTCCCAGTTCCAGTCTAATGCAGACACTTGGCTGAGGAATAGTAT
TCTTCCATACTACCCAGCCACAAGGATCACACACATAACTGTCGGTGCTGAAGTCACAGA
AAGCCCCAATAATGCCTCTTCTATGGTGGTACCTGCCATGAAAAATGTCCTCACAGCTCT
ACGAAAAGCTGGTCTGCATAAGAAGATCAAAGTTTCAAGTACCCATTCCCTAGGGATTTT
GTCTCGGTCATTCCCACCCTCTGCAGGGGCTTTTAATAGCAGCCATGCATTCTTTCTCAA
ACCCATGTTGGAATTTCTTGCTGAGAATCAGTCTCCTTTCATGGTTGATATCTATCCTTA
CTATGCCTACAGAGATTCCCCAAACAACGTGTCTCTAGACTATGCTCTATTTGAGTCATC
CTCAGAAGTTATTGATCCAAACACTGGTTTGCTTTACACTAACATGTTTGATGCTCAAAT
TGATGCTCTATATTTTGCATTGATGGCTCTTAATTTCAGAACAATTAAAATTATGGTCAC
TGAGACAGGCTGGCCTTCAAAAGGATCTCCCAAGGAGACAGCTGCAACTCCTGATAATGC
TCAGACTTATAACACCAATCTCATCCGTCACGTCATCAATGACACCGGCACTCCTGCAAA
GCCAGGAGAGGATCTAGATGTGTATATCTTCTCATTGTTCAATGAGAACAGGAAGTCTGG
TTTGGAATCTGAAAGGAACTGGGGGTTATTTTATCCAGATCAAACAAGTGTTTATAACTT
GGATATGACCGGAAAGGGTGCTGTAACCATGACTACAGAAACAAATGTAACAAGCTCAAA
TGGAACATGGTGTATCGCATCGTCTACCGCTTCAGAAATGGACTTGCAGAATGCCTTAGA
TTGGGCTTGTGGTCCTGGGAATGTGGACTGCTCTGCTATTCAGCCTAGCCAGCCTTGTTT
TGAACCAGATAATGTAGTTTCCCATGCATCTTTTGCATTCAACAGTTACTACCAGCAAAA
TGGAGCTACTGATATTGCTTGCAGTTTTGGAGGGTCAGGAATCAAAGTTAATAAGAACCC
AAGTTATGATAACTGCTTGTATATGACAACAGGGAGCAACAAAACTGCTGCAAGTAATGC
AACAACAGCCCTTGCTTCAACCACCACTTCCTCTGCAGCGAATGCGTTGTTTGCTTGGAC
ACTGAGTTGCCTGCTTATGGCTCTGCTCTCATTTCTCTAAATCTTGGCAAATGTCTAGGG
AAGCTCGATTTTGGAAGCATGCTGAATAGCCCACCATGGAAATGAGAGTGGTGGCCGCTT
TTGAGATGCTGGAACAGGTACAGGAAAGGAAATTTTCTTAAACTGCATGAGATTGTATCT
GTAGAAGAGCAACCTGCCTTTAGTTTTGCATGATATAAAGAGGTGCTAAGAAGAGGGTAA
TCATTTGAGAAGATTATTTGTAGGTGGTAGATCTGTATTTGGTACATATAAGGTAGTTCA
GGCTTGTGCAATTGCTTTGTAGTTGAAGATTGTTGTGTAACTGATTTAAAGTGGGTGGAA
GTTGCAATTATGCTGTGTGACACAATTTTAAGCAAAATTAAGTTGAATGGATGTAGTTTT
TGTGCA