Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g02870.t01
CDS Infomation

cds chromosome:12X:11:2313394:2319205:1 gene:VIT_11s0016g02870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTACAGAACCGCAGCTTCGCGTGTTAGGGCACTCAAGGGCCGTGCAGGCAGTAGGGCC
CTTATCAGATTTGCAAGTTCAAGTGCTGTTGCCACAAGCTCATCATCTTCTGGAGGTTTA
TTTAGCTGGCTGATCGGAGACAAGTCCAAGACACTGCCTCCTCTTGACTTCCCACTTCCC
AATGTTGCTCTCCCACCTGCACTGCCTGACTATGTTGAGCCCAGTAAGGTTAAGATAACA
ACTATTTCCAATGGTGTCAAAATAGCCTCAGAAACATCAGCTAATCCTGCTGCCTCAATA
GGGTTATATGTTGACTGTGGATCAATATATGAGACACCAATCTCATTTGGAGCCACACAC
CTTCTTGAGCGTATGGCCTTCAAGAGCACAATAAACAGGAGCTACCTACGCGTTATACGA
GAAGTGGAGGCAATTGGTGGCAATGTGACAGCATCAGCCTCTCGGGAACAGATGGGGTAC
ACCTTTGATGCTCTCAAAACTTATGTTCCTGAAATGGTAGAGCTTCTTATTGATTCTGTG
AGGAACCCCGCATTCCTTGACTGGGAGGTCAGTGAACAGCTTGAAAAGGTGAAAGCTGAG
ATTGGAGAAGCTTCCAACAATCCTCAAGGCTTGCTTTTGGAGGCGCTTCACTCAGCTGGA
TATTCTGGGGCTTTGGCAAATCCTCTTTTAGCTCCAGAATCTGCAATAAACAGATTAGAC
AGCACAATTTTGGAGGAGTTTGTTGCTTTAAATTATACTGCTCCTCGGATGGTACTTGCG
GCTTCTGGGGTTGAACATGAGGAACTGTTATCTGTTGCAGAACCACTTCTCTCTGACCTA
CCCAGTGTTCCTCGTCCTGAGGAACCTAAATCTGTGTATGTTGGAGGTGATTATCGCTGT
CAAGCTGACTCAGGGAAAACACATTTTGCTCTGGCCTTTGAAGTTCCCGGTGGTTGGCAT
AAGGAGAAGGAAGCAATGACTTTGACAGTTCTTCAGATGCTAATGGGAGGAGGTGGATCT
TTCTCTGCTGGTGGTCCTGGAAAAGGGATGTACTCACGACTATATCTTCGTGTCTTGAAC
ACATATCCACAAATTCAGTCATTCTCTGCATTCAACAGTATCTACAATAATACCGGCTTA
TTTGGAATTCAAGCTACCACTGGCTCTGATTTTGTATCAAAAGCCATTGATATAGCAGCT
AAAGAACTGGTTGCAGTTGCAACACCTGGACAAGTTGACCAAGTACAGCTAGATCGTGCC
AAACAGACCACGAAGACTGCTGTTCTGATGAACTTGGAATCTAGAATGGTTGCATCAGAA
GATATAGGTAGACAAATCTTGACATATGGAGAGAGGAAACCTGTGGATCATTTCTTGAAG
GCTGTGGATGAGGTTACTTTGAAGGATATTGCTTCCATCACCCAGAAGCTTCTTTCTTCC
CCTCTCACAATGGCATCGTACGGAGATGTTATTTTTGTACCAAGCTACGAAAATGTAAGC
AGCAAGTTCCAATCAAAGTGA

Peptide Sequence

PEP ID

VIT_11s0016g02870.t01
PEP Infomation

pep chromosome:12X:11:2313394:2319205:1 gene:VIT_11s0016g02870 transcript:VIT_11s0016g02870.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MYRTAASRVRALKGRAGSRALIRFASSSAVATSSSSSGGLFSWLIGDKSKTLPPLDFPLP
NVALPPALPDYVEPSKVKITTISNGVKIASETSANPAASIGLYVDCGSIYETPISFGATH
LLERMAFKSTINRSYLRVIREVEAIGGNVTASASREQMGYTFDALKTYVPEMVELLIDSV
RNPAFLDWEVSEQLEKVKAEIGEASNNPQGLLLEALHSAGYSGALANPLLAPESAINRLD
STILEEFVALNYTAPRMVLAASGVEHEELLSVAEPLLSDLPSVPRPEEPKSVYVGGDYRC
QADSGKTHFALAFEVPGGWHKEKEAMTLTVLQMLMGGGGSFSAGGPGKGMYSRLYLRVLN
TYPQIQSFSAFNSIYNNTGLFGIQATTGSDFVSKAIDIAAKELVAVATPGQVDQVQLDRA
KQTTKTAVLMNLESRMVASEDIGRQILTYGERKPVDHFLKAVDEVTLKDIASITQKLLSS
PLTMASYGDVIFVPSYENVSSKFQSK

Transcript Sequence

Transcript ID

VIT_11s0016g02870.t01
Transcript Infomation

cdna chromosome:12X:11:2313394:2319205:1 gene:VIT_11s0016g02870 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCCCAGTGGATTCTTTCTAGGGTTTCACAGTGTTCGATCGACATGTACAGAACCGCAGCT
TCGCGTGTTAGGGCACTCAAGGGCCGTGCAGGCAGTAGGGCCCTTATCAGATTTGCAAGT
TCAAGTGCTGTTGCCACAAGCTCATCATCTTCTGGAGGTTTATTTAGCTGGCTGATCGGA
GACAAGTCCAAGACACTGCCTCCTCTTGACTTCCCACTTCCCAATGTTGCTCTCCCACCT
GCACTGCCTGACTATGTTGAGCCCAGTAAGGTTAAGATAACAACTATTTCCAATGGTGTC
AAAATAGCCTCAGAAACATCAGCTAATCCTGCTGCCTCAATAGGGTTATATGTTGACTGT
GGATCAATATATGAGACACCAATCTCATTTGGAGCCACACACCTTCTTGAGCGTATGGCC
TTCAAGAGCACAATAAACAGGAGCTACCTACGCGTTATACGAGAAGTGGAGGCAATTGGT
GGCAATGTGACAGCATCAGCCTCTCGGGAACAGATGGGGTACACCTTTGATGCTCTCAAA
ACTTATGTTCCTGAAATGGTAGAGCTTCTTATTGATTCTGTGAGGAACCCCGCATTCCTT
GACTGGGAGGTCAGTGAACAGCTTGAAAAGGTGAAAGCTGAGATTGGAGAAGCTTCCAAC
AATCCTCAAGGCTTGCTTTTGGAGGCGCTTCACTCAGCTGGATATTCTGGGGCTTTGGCA
AATCCTCTTTTAGCTCCAGAATCTGCAATAAACAGATTAGACAGCACAATTTTGGAGGAG
TTTGTTGCTTTAAATTATACTGCTCCTCGGATGGTACTTGCGGCTTCTGGGGTTGAACAT
GAGGAACTGTTATCTGTTGCAGAACCACTTCTCTCTGACCTACCCAGTGTTCCTCGTCCT
GAGGAACCTAAATCTGTGTATGTTGGAGGTGATTATCGCTGTCAAGCTGACTCAGGGAAA
ACACATTTTGCTCTGGCCTTTGAAGTTCCCGGTGGTTGGCATAAGGAGAAGGAAGCAATG
ACTTTGACAGTTCTTCAGATGCTAATGGGAGGAGGTGGATCTTTCTCTGCTGGTGGTCCT
GGAAAAGGGATGTACTCACGACTATATCTTCGTGTCTTGAACACATATCCACAAATTCAG
TCATTCTCTGCATTCAACAGTATCTACAATAATACCGGCTTATTTGGAATTCAAGCTACC
ACTGGCTCTGATTTTGTATCAAAAGCCATTGATATAGCAGCTAAAGAACTGGTTGCAGTT
GCAACACCTGGACAAGTTGACCAAGTACAGCTAGATCGTGCCAAACAGACCACGAAGACT
GCTGTTCTGATGAACTTGGAATCTAGAATGGTTGCATCAGAAGATATAGGTAGACAAATC
TTGACATATGGAGAGAGGAAACCTGTGGATCATTTCTTGAAGGCTGTGGATGAGGTTACT
TTGAAGGATATTGCTTCCATCACCCAGAAGCTTCTTTCTTCCCCTCTCACAATGGCATCG
TACGGAGATGTTATTTTTGTACCAAGCTACGAAAATGTAAGCAGCAAGTTCCAATCAAAG
TGACATCACTTATATATGCCAGAAGCTGGGTAGTGGCACCTGTTTATTGTCCTTAATTTG
TTGGACGTATGCTTTTGTTGGATGTATGCTTATCGTCAAGCTCTCTTACAGCCAACACCT
GTTGAGAATAAGAAAGTAATTTTAAACATTCTCCATCTTAATAAAATAATTTGGTGATCC
TGGGCAAGCTACATTTTGATGCACA