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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g02840.t01
CDS Infomation

cds chromosome:12X:11:2285448:2288842:-1 gene:VIT_11s0016g02840 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP complex subunit sigma [Source:UniProtKB/TrEMBL;Acc:D7TBD6]
Sequence

ATGGTGAACAAGCAAGGCCAGACCCGTCTCGCTCAGTACTACGAGTACCTCAACCTGGAA
GAACGACGCGCTCTCGAAGGCGAGATCGTTCGCAAGTGCCTTGCCCGTAATGAGCAGCAG
TGTTCATTTGTTGAGCATCGGACCTACAAAATTGTGTACAGGCGCTACGCATCACTCTTT
TTCTTGGTTGGAGTTGACAATGGTGAAAATGAACTTGCGATTCTGGAGTTCATACATCTG
TTAGTCGAAACCATGGACCGCCATTTTGGCAATGTGTGTGAACTAGACATCATGTTCCAT
CTGGAGAAAGCGCATTTCATGCTGGAGGAAATGGTCATGAATGGGTGTATTGTTGAGACA
AGCAAGGCTAACATTCTGGCCCCAATACAGCTGATGGACAAAGCATCATAA

Peptide Sequence

PEP ID

VIT_11s0016g02840.t01
PEP Infomation

pep chromosome:12X:11:2285448:2288842:-1 gene:VIT_11s0016g02840 transcript:VIT_11s0016g02840.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP complex subunit sigma [Source:UniProtKB/TrEMBL;Acc:D7TBD6]
Sequence

MVNKQGQTRLAQYYEYLNLEERRALEGEIVRKCLARNEQQCSFVEHRTYKIVYRRYASLF
FLVGVDNGENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVMNGCIVET
SKANILAPIQLMDKAS

Transcript Sequence

Transcript ID

VIT_11s0016g02840.t01
Transcript Infomation

cdna chromosome:12X:11:2285448:2288842:-1 gene:VIT_11s0016g02840 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP complex subunit sigma [Source:UniProtKB/TrEMBL;Acc:D7TBD6]
Sequence

AGGCCAAAACCCTTTCCCCTAGGTTCTCAGGCAAAATCGAATTGAAGATCAGCAAAAATG
GGGATCAGATTCATATTGATGGTGAACAAGCAAGGCCAGACCCGTCTCGCTCAGTACTAC
GAGTACCTCAACCTGGAAGAACGACGCGCTCTCGAAGGCGAGATCGTTCGCAAGTGCCTT
GCCCGTAATGAGCAGCAGTGTTCATTTGTTGAGCATCGGACCTACAAAATTGTGTACAGG
CGCTACGCATCACTCTTTTTCTTGGTTGGAGTTGACAATGGTGAAAATGAACTTGCGATT
CTGGAGTTCATACATCTGTTAGTCGAAACCATGGACCGCCATTTTGGCAATGTGTGTGAA
CTAGACATCATGTTCCATCTGGAGAAAGCGCATTTCATGCTGGAGGAAATGGTCATGAAT
GGGTGTATTGTTGAGACAAGCAAGGCTAACATTCTGGCCCCAATACAGCTGATGGACAAA
GCATCATAAAATTTCCACTGCCAAGCCAGGAATTTCCCTCTGAATCAAGAGGCTTGGATC
TCATTTGTGTTATTACCTTGTTGTACAACATGCAAAAGACACAGCATGAGTACAGTTTTC
TATAAAAACGTAAAGATCATTTGTTGATTGAATAGATCATGTAGTAAAATATGGGTACTC
AGATTGATTTGGAAGTGCCTAAACTTATTCTTTGGAAATTGATGGCAAGTTTC