Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g02790.t01
CDS Infomation

cds chromosome:12X:11:2199317:2201227:-1 gene:VIT_11s0016g02790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGATCGGAGAATCGCGCCATCCAAATCCGACGGTCCTGGTTCCTCCTTGGCCCCAC
TTTGACGATCCTACGGTTGATATATCTTTCCCGTATCCGGTAAGTGGTGTCTCCGTTAAC
TCTAACGCCAATGCTAACGGTCTTCAGGGCGGTGAACACTCCCCATTTCTTCTTGGGGAG
GCGTTGACAGCGCTGCAACGTTATCTCCCGTCCAATGACGTTGATGTGGATTCGGACTCC
GATATTTCCGGTCGTGAGGCCGACATTCCGGTGGACGCATACTCGTGCGATCATTTTCGG
ATGTTTGAGTTCAAGGTGAGGAGGTGCGCACGTGGGCGGTCGCATGACTGGACTGAGTGT
CCGTACGCTCATCCAGGCGAGAAGGCTCGCCGCAGGGATCCTAGGAAATTTCACTATTCC
GGCACGGCGTGTCCTGACTTCAGGAAGGGGAACTGCAAGAAGGGTGATTCGTGTGAGTTC
GCGCATGGCGTATTTGAGTGTTGGCTCCACCCGGCTCGCTATCGCACCCAGCCATGTAAG
GACGGGCCCAACTGTCGCCGGCGGGTTTGCTTCTTTGCTCACACGGCTGAGCAGCTGAGG
GTTTTGCCTCAGCAGAGTCCGAGGACGCCTGGGTCGGTGGAGTCCTATGACGGGTCGCCG
CTTAGGCAAGCGTTGGAAGCTTCCTGTGCAAAAACTCTGCCGTTTATGTCATCTCCAGGG
TCGGTTTCCCCGCCGGGGTCGCCGCCGCCGGAGTCTCCGCCGATGTCTCCCATTACATCG
AGTCTGAGCCGTTCACTGGGCTCGAACTCCATCAACGAAATGGTTGCGTCTCTACGACAA
CTCCAACTCAGCAAGGTGAAGTCAGCACCATCCTCATGGTGCGTTCATATGGGTTCTCCA
GGTGGGTTCGGGTCTCCCAGAGCCTCCATAATCCGACCGGGCTTCTGCAGCTTGCCGTCG
ACCCCAACCAGAGCCCCGAAACGGCACGGCCTCGGGTTCGTGGACCTCTTCGAAGAAGAG
CCAGCCATGGAGAGGGTGGAGTCAGGCAGAGACTTGCGAGCCAAGATGTTCGAAAAGTTG
AGCAAGGAAAACTCTTTGGATCGACCCGACCCTTCAGCCTCAGGTGCTGGTCCAGATGTT
GGGTGGGTGTCAGAGCTGGTAAAATTAATGAAAATCCCCATTTCCCAACTCCCAACAAGG
ATGCCTCGCCGGTATTTTACTTGTGGCGGATTTTTGGTAGTCTGCTTTATCCACATAAAG
CTCAAAATCTTGCCCATTTATGAGCAAATATGGTAA

Peptide Sequence

PEP ID

VIT_11s0016g02790.t01
PEP Infomation

pep chromosome:12X:11:2199317:2201227:-1 gene:VIT_11s0016g02790 transcript:VIT_11s0016g02790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMIGESRHPNPTVLVPPWPHFDDPTVDISFPYPVSGVSVNSNANANGLQGGEHSPFLLGE
ALTALQRYLPSNDVDVDSDSDISGREADIPVDAYSCDHFRMFEFKVRRCARGRSHDWTEC
PYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDSCEFAHGVFECWLHPARYRTQPCK
DGPNCRRRVCFFAHTAEQLRVLPQQSPRTPGSVESYDGSPLRQALEASCAKTLPFMSSPG
SVSPPGSPPPESPPMSPITSSLSRSLGSNSINEMVASLRQLQLSKVKSAPSSWCVHMGSP
GGFGSPRASIIRPGFCSLPSTPTRAPKRHGLGFVDLFEEEPAMERVESGRDLRAKMFEKL
SKENSLDRPDPSASGAGPDVGWVSELVKLMKIPISQLPTRMPRRYFTCGGFLVVCFIHIK
LKILPIYEQIW

Transcript Sequence

Transcript ID

VIT_11s0016g02790.t01
Transcript Infomation

cdna chromosome:12X:11:2199317:2201227:-1 gene:VIT_11s0016g02790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGAATTCTGGGGACAGCGCATCAAGATGATGATCGGAGAATCGCGCCATCCAAATCCGAC
GGTCCTGGTTCCTCCTTGGCCCCACTTTGACGATCCTACGGTTGATATATCTTTCCCGTA
TCCGGTAAGTGGTGTCTCCGTTAACTCTAACGCCAATGCTAACGGTCTTCAGGGCGGTGA
ACACTCCCCATTTCTTCTTGGGGAGGCGTTGACAGCGCTGCAACGTTATCTCCCGTCCAA
TGACGTTGATGTGGATTCGGACTCCGATATTTCCGGTCGTGAGGCCGACATTCCGGTGGA
CGCATACTCGTGCGATCATTTTCGGATGTTTGAGTTCAAGGTGAGGAGGTGCGCACGTGG
GCGGTCGCATGACTGGACTGAGTGTCCGTACGCTCATCCAGGCGAGAAGGCTCGCCGCAG
GGATCCTAGGAAATTTCACTATTCCGGCACGGCGTGTCCTGACTTCAGGAAGGGGAACTG
CAAGAAGGGTGATTCGTGTGAGTTCGCGCATGGCGTATTTGAGTGTTGGCTCCACCCGGC
TCGCTATCGCACCCAGCCATGTAAGGACGGGCCCAACTGTCGCCGGCGGGTTTGCTTCTT
TGCTCACACGGCTGAGCAGCTGAGGGTTTTGCCTCAGCAGAGTCCGAGGACGCCTGGGTC
GGTGGAGTCCTATGACGGGTCGCCGCTTAGGCAAGCGTTGGAAGCTTCCTGTGCAAAAAC
TCTGCCGTTTATGTCATCTCCAGGGTCGGTTTCCCCGCCGGGGTCGCCGCCGCCGGAGTC
TCCGCCGATGTCTCCCATTACATCGAGTCTGAGCCGTTCACTGGGCTCGAACTCCATCAA
CGAAATGGTTGCGTCTCTACGACAACTCCAACTCAGCAAGGTGAAGTCAGCACCATCCTC
ATGGTGCGTTCATATGGGTTCTCCAGGTGGGTTCGGGTCTCCCAGAGCCTCCATAATCCG
ACCGGGCTTCTGCAGCTTGCCGTCGACCCCAACCAGAGCCCCGAAACGGCACGGCCTCGG
GTTCGTGGACCTCTTCGAAGAAGAGCCAGCCATGGAGAGGGTGGAGTCAGGCAGAGACTT
GCGAGCCAAGATGTTCGAAAAGTTGAGCAAGGAAAACTCTTTGGATCGACCCGACCCTTC
AGCCTCAGGTGCTGGTCCAGATGTTGGGTGGGTGTCAGAGCTGGTAAAATTAATGAAAAT
CCCCATTTCCCAACTCCCAACAAGGATGCCTCGCCGGTATTTTACTTGTGGCGGATTTTT
GGTAGTCTGCTTTATCCACATAAAGCTCAAAATCTTGCCCATTTATGAGCAAATATGGTA
A