Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g02780.t01
CDS Infomation

cds chromosome:12X:11:2193249:2194453:-1 gene:VIT_11s0016g02780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTAGAGCTCCTTGTTGTGACAAGGCTAATGTCAAGAGGGGACCATGGTCTCCTGAA
GAGGACAACATTCTCAGGGCCTTTGTTGAGGCCCATGGCACTGGTGGTAACTGGATTGCT
CTTCCTCGTAAAGCAGGGCTTAAGCGCTGCGGCAAGAGTTGCAGGTTGAGATGGCTCAAT
TATCTCAGACCAGACATCAAGCATGGAGGCTTTACTGAGGACGAAGACAACATTATCGTC
ACTCTCTACAACAACATCGGAAGCAGGTGGTCAGTCATAGCCTCACATCTGCCCCGGAGA
ACAGACAATGATGTGAAGAACTACTGGAACACCAAATTGAAGAAGAAGCTCTCAGGAAAA
GCTGACCTTAAGAAAGGCAGCAACAACAATGGCAATGCAACTTCTAACAGCATCATTCAT
CTCAGCTCAGTACAGTTCCCGGGTTCCATCCCTAAAGTTGAGGACTATGATTATGGAATT
TCAGTTGGTTTCGGTACAGATTCGAGCCCGGTGTCGTACCAAACAGGCATGAGTTACCAG
CAAGATTTTCATTCACAGGGCCTGGTTTCAAATCCAGCTGTTCAATTCCCTCTCCCAGGG
CCGATGGAAGTTTCTGAATTCAACACAAGTGGAAACACCAGCTACAGCATTTCATCATCT
CAGGAAGTTTCAAGCCTTTCAGCTGCCTCATCTTCTCTGGCTCTAGACAACACCACTCAT
GCCTCCTGGTCCAGCTACAATGGAGGTAGAGTTCAAGATGATGAGTTCCTTTTCGACTTT
GGATCCCCTTATGGACTCCTCAGTGGCTTTGGTTTTCAAGAACAAGCCCATGAAGCTGGT
CTGGTCAATCAAATTTAG

Peptide Sequence

PEP ID

VIT_11s0016g02780.t01
PEP Infomation

pep chromosome:12X:11:2193249:2194453:-1 gene:VIT_11s0016g02780 transcript:VIT_11s0016g02780.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGRAPCCDKANVKRGPWSPEEDNILRAFVEAHGTGGNWIALPRKAGLKRCGKSCRLRWLN
YLRPDIKHGGFTEDEDNIIVTLYNNIGSRWSVIASHLPRRTDNDVKNYWNTKLKKKLSGK
ADLKKGSNNNGNATSNSIIHLSSVQFPGSIPKVEDYDYGISVGFGTDSSPVSYQTGMSYQ
QDFHSQGLVSNPAVQFPLPGPMEVSEFNTSGNTSYSISSSQEVSSLSAASSSLALDNTTH
ASWSSYNGGRVQDDEFLFDFGSPYGLLSGFGFQEQAHEAGLVNQI

Transcript Sequence

Transcript ID

VIT_11s0016g02780.t01
Transcript Infomation

cdna chromosome:12X:11:2193249:2194453:-1 gene:VIT_11s0016g02780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GACATGGGTAGAGCTCCTTGTTGTGACAAGGCTAATGTCAAGAGGGGACCATGGTCTCCT
GAAGAGGACAACATTCTCAGGGCCTTTGTTGAGGCCCATGGCACTGGTGGTAACTGGATT
GCTCTTCCTCGTAAAGCAGGGCTTAAGCGCTGCGGCAAGAGTTGCAGGTTGAGATGGCTC
AATTATCTCAGACCAGACATCAAGCATGGAGGCTTTACTGAGGACGAAGACAACATTATC
GTCACTCTCTACAACAACATCGGAAGCAGGTGGTCAGTCATAGCCTCACATCTGCCCCGG
AGAACAGACAATGATGTGAAGAACTACTGGAACACCAAATTGAAGAAGAAGCTCTCAGGA
AAAGCTGACCTTAAGAAAGGCAGCAACAACAATGGCAATGCAACTTCTAACAGCATCATT
CATCTCAGCTCAGTACAGTTCCCGGGTTCCATCCCTAAAGTTGAGGACTATGATTATGGA
ATTTCAGTTGGTTTCGGTACAGATTCGAGCCCGGTGTCGTACCAAACAGGCATGAGTTAC
CAGCAAGATTTTCATTCACAGGGCCTGGTTTCAAATCCAGCTGTTCAATTCCCTCTCCCA
GGGCCGATGGAAGTTTCTGAATTCAACACAAGTGGAAACACCAGCTACAGCATTTCATCA
TCTCAGGAAGTTTCAAGCCTTTCAGCTGCCTCATCTTCTCTGGCTCTAGACAACACCACT
CATGCCTCCTGGTCCAGCTACAATGGAGGTAGAGTTCAAGATGATGAGTTCCTTTTCGAC
TTTGGATCCCCTTATGGACTCCTCAGTGGCTTTGGTTTTCAAGAACAAGCCCATGAAGCT
GGTCTGGTCAATCAAATTTAG