Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g02540.t01
CDS Infomation

cds chromosome:12X:11:2023405:2032462:-1 gene:VIT_11s0016g02540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGTCGTCATCTCTCACACCTCCAGAAGTGCCAATGGAGCTCCACGCCATCAACCGA
GGCAAACTCGTTAAATCTCTCCTCCAACACCTCACTGAGTCAACTCATCCTCTCCACGGC
TTCGTTCTTCTCCAGGGAGGCGAGGAGCAAACGCGGCACGACACCGATCACGCCGAACTA
TTTAGGCAAGAAAGCTATTTTGCATACTTGTTTGGCGTCAGAGAGCCTGGTTTCTATGGT
GCTATTGACATTGCAACGGGGAAATCTATTCTGTTTGCTCCTAGGTTGCCTGCCGAGTAT
GCTGTTTGGTTGGGAGAAATAAAACCTTTATCATACTTTAAGGAAAGATACATGGTTAGC
AAGGTCTGCTATACTGATGAGATTGCAGGAGTTTTGCATGATGAGTACAAGGAACAGGGA
AAACCTTTGTTGTTTCTTTTGCACGGGCTTAACACTGACAGCAATAACTTCTCAAAACCA
GCAGAGTTTGAGGGAATAGAGAAGTTCAAGACAGATTTAAATACTTTGCATCCTATTCTA
GCCGAATGTCGTGTTTTTAAGTCAGACCTAGAGCTCGCTCTCATCCAGTATGCCAACGAT
ATAAGTTCTGAAGCTCATGTTGAGGTTATGAGAAAAACAACAGTTGGCATGAAAGAGTAT
CAGTTGGAAAGCATGTTTCTTCACCACACTTACATGTATGGAGGATGTAGGCACTGCTCA
TACACATGTATTTGTGCAACTGGGGGAAATAGTGCTGTTCTTCATTATGGGCATGCAGCA
GCTCCAAATGACAGGACCTTTGAAGACGGAGATATGGCATTGCTTGATATGGGAGCTGAA
TATCATTTTTATGGTTCTGATATAACTTGTTCATTCCCCGTGAATGGGAAGTTTACAAGT
GATCAGCGCCTTATCTATAATGCTGTCCTTCAGGCTCACAACACAGTAATATCTGCAATG
AAACCTGGAGTTAACTGGATAGACATGCACAAGTTAGCAGAGAAAATTATTCTCGACTCC
TTGAAAAAAGGGTGCATTGTTGTTGGTGATGTTGATGATATGATGGTTAAGCGATTGGGT
GCTGTTTTCATGCCTCATGGTCTTGGTCACTTCCTGGGTATTGACACTCATGATACGGGA
GGCTACTTAGAGGGATTAGAAAGACCAAAAGAACCTGGATTGAAGTCTCTGCGCACAGTT
AGAGATCTGCAGGAAGGCATGGTGATAACAGTGGAGCCTGGATGCTACTTTATTGATGCA
TTGTTGGCTCCAGCAATGGAAAATTCGGAAACTTCCAAGTTCTTTAATCATGAAATAATT
GGCAGATTTAAAAGTTTTGGTGGAGTTCGAATTGAAAGCGATGTGCATGTTACTTCCAAT
GGTTGCAAGAACATGACGAACGTCCCTCGGGAGACATGGGAGATTGAAGCCGTAATGGCA
GGATCACCATGGCCGCTTGACAAGTCCTCTATTCATTCAGAAAATGGCAGAGAGGGCAAG
TAA

Peptide Sequence

PEP ID

VIT_11s0016g02540.t01
PEP Infomation

pep chromosome:12X:11:2023405:2032462:-1 gene:VIT_11s0016g02540 transcript:VIT_11s0016g02540.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASSSLTPPEVPMELHAINRGKLVKSLLQHLTESTHPLHGFVLLQGGEEQTRHDTDHAEL
FRQESYFAYLFGVREPGFYGAIDIATGKSILFAPRLPAEYAVWLGEIKPLSYFKERYMVS
KVCYTDEIAGVLHDEYKEQGKPLLFLLHGLNTDSNNFSKPAEFEGIEKFKTDLNTLHPIL
AECRVFKSDLELALIQYANDISSEAHVEVMRKTTVGMKEYQLESMFLHHTYMYGGCRHCS
YTCICATGGNSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYHFYGSDITCSFPVNGKFTS
DQRLIYNAVLQAHNTVISAMKPGVNWIDMHKLAEKIILDSLKKGCIVVGDVDDMMVKRLG
AVFMPHGLGHFLGIDTHDTGGYLEGLERPKEPGLKSLRTVRDLQEGMVITVEPGCYFIDA
LLAPAMENSETSKFFNHEIIGRFKSFGGVRIESDVHVTSNGCKNMTNVPRETWEIEAVMA
GSPWPLDKSSIHSENGREGK

Transcript Sequence

Transcript ID

VIT_11s0016g02540.t01
Transcript Infomation

cdna chromosome:12X:11:2023405:2032462:-1 gene:VIT_11s0016g02540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTCGACCCGATCCGTTCTCCCGGCACACAGCCAAGGGTCCCAGAGTATACATTCGTCTCT
TGTCATCAGTCGATGGAGAGTCACAGAGAAGCAAATTCCATGGCGTCGTCATCTCTCACA
CCTCCAGAAGTGCCAATGGAGCTCCACGCCATCAACCGAGGCAAACTCGTTAAATCTCTC
CTCCAACACCTCACTGAGTCAACTCATCCTCTCCACGGCTTCGTTCTTCTCCAGGGAGGC
GAGGAGCAAACGCGGCACGACACCGATCACGCCGAACTATTTAGGCAAGAAAGCTATTTT
GCATACTTGTTTGGCGTCAGAGAGCCTGGTTTCTATGGTGCTATTGACATTGCAACGGGG
AAATCTATTCTGTTTGCTCCTAGGTTGCCTGCCGAGTATGCTGTTTGGTTGGGAGAAATA
AAACCTTTATCATACTTTAAGGAAAGATACATGGTTAGCAAGGTCTGCTATACTGATGAG
ATTGCAGGAGTTTTGCATGATGAGTACAAGGAACAGGGAAAACCTTTGTTGTTTCTTTTG
CACGGGCTTAACACTGACAGCAATAACTTCTCAAAACCAGCAGAGTTTGAGGGAATAGAG
AAGTTCAAGACAGATTTAAATACTTTGCATCCTATTCTAGCCGAATGTCGTGTTTTTAAG
TCAGACCTAGAGCTCGCTCTCATCCAGTATGCCAACGATATAAGTTCTGAAGCTCATGTT
GAGGTTATGAGAAAAACAACAGTTGGCATGAAAGAGTATCAGTTGGAAAGCATGTTTCTT
CACCACACTTACATGTATGGAGGATGTAGGCACTGCTCATACACATGTATTTGTGCAACT
GGGGGAAATAGTGCTGTTCTTCATTATGGGCATGCAGCAGCTCCAAATGACAGGACCTTT
GAAGACGGAGATATGGCATTGCTTGATATGGGAGCTGAATATCATTTTTATGGTTCTGAT
ATAACTTGTTCATTCCCCGTGAATGGGAAGTTTACAAGTGATCAGCGCCTTATCTATAAT
GCTGTCCTTCAGGCTCACAACACAGTAATATCTGCAATGAAACCTGGAGTTAACTGGATA
GACATGCACAAGTTAGCAGAGAAAATTATTCTCGACTCCTTGAAAAAAGGGTGCATTGTT
GTTGGTGATGTTGATGATATGATGGTTAAGCGATTGGGTGCTGTTTTCATGCCTCATGGT
CTTGGTCACTTCCTGGGTATTGACACTCATGATACGGGAGGCTACTTAGAGGGATTAGAA
AGACCAAAAGAACCTGGATTGAAGTCTCTGCGCACAGTTAGAGATCTGCAGGAAGGCATG
GTGATAACAGTGGAGCCTGGATGCTACTTTATTGATGCATTGTTGGCTCCAGCAATGGAA
AATTCGGAAACTTCCAAGTTCTTTAATCATGAAATAATTGGCAGATTTAAAAGTTTTGGT
GGAGTTCGAATTGAAAGCGATGTGCATGTTACTTCCAATGGTTGCAAGAACATGACGAAC
GTCCCTCGGGAGACATGGGAGATTGAAGCCGTAATGGCAGGATCACCATGGCCGCTTGAC
AAGTCCTCTATTCATTCAGAAAATGGCAGAGAGGGCAAGTAATTCAGCACCCAGCGTCCT
TGATGACCTAACTGGCTCTCCAGAAAATGTTGACTGTATATGAGCGACTTCTCTTTTGAA
GCATCAGTTACAAATCTTTCAGCTGCCCAGCTGAATCAAACCCTCTCAAACACCTGAAAA
TATTGCAACAAATTACTAAAAAAGCAATATTTATAAATAATTGCTTTTATAGTATATGCT
TTAAGCCTTTTAAGTTTTAACACATTCACTAACATAGAATTTGTTTTTATTTTCAATGGT
AAATTATAAAAATCATTATTCTCT