Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g02530.t01
CDS Infomation

cds chromosome:12X:11:2016645:2022355:-1 gene:VIT_11s0016g02530 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGCGAGCCTGGCGAGTCTGATAAAGACATTGCACGATCTTTCGAGCTCGACGACTCC
GTCATTGGCAGTGATAAGACCAGCGCCGATTATTACTTCGACTCCTATTCTCACTTCGGT
ATTCATGAAGAAATGTTGAAGGATGTTGTGAGAACTAAGACCTATCAAAATGTCATTTAT
AAGAATAAGTTTCTGTTCAAGAACAAAGTAGTCCTTGATGTGGGAGCAGGGACTGGAATT
CTGTCCCTCTTTTGTGCAAAGGCAGGGGCAAAACATGTTTATGCGGTTGAGTGTTCCCAT
ATGGCTGACATGGCAAAAGAGATTGTTGAAGTAAATGGATTTTCTGATGTTATAACAGTT
ATGAAAGGAAAGGTTGAAGAAATTGTTCTTCCTGTTGCTCAAGTGGATATCATTATATCA
GAATGGATGGGCTACTTTTTGTTGTTTGAGAATATGTTAAATACAGTCCTATATGCTCGT
GATAAATGGCTTGTGAATGATGGTATTGTGCTGCCAGACAAAGCATCTCTCTATTTGACA
GCCATTGAGGATGCGGAGTACAAAGAAGACAAGATTGAATTTTGGAACAGTGTGTATGGC
TTTGACATGAGCTGTATCAAGAAGCAAGCAATGATGGAACCACTTGTGGACACAGTTGAT
CAGAATCAGATCGTCACAAACTGCCAGTTACTCAAGACTATGGACATCTCTAAAATGGCT
CCTGGGGATGCTTCCTTCACAGCTCCTTTTAAGCTTGTGGCATCACGCGATGATTACATC
CATGCTCTTGTAGCATATTTTGATGTATCATTTACCAAGTGTCATAAATTGACAGGCTTC
TCCACAGGGCCAAGATCACGGGCTACACATTGGAAACAAACAGTCCTGTATCTGGAAGAT
GTGCTAACCATATGCGAAGGGGAGACAGTTGTTGGGAGCATGACAGTGGCCCAGAACAAG
AAGAATCCTCGTGACGTTGATATAATGATCAAATATTCCTTCAATGGTCAGCGTTGCCAG
GTCTCAAGAACTCAATATTACAAGATGCGTTAG

Peptide Sequence

PEP ID

VIT_11s0016g02530.t01
PEP Infomation

pep chromosome:12X:11:2016645:2022355:-1 gene:VIT_11s0016g02530 transcript:VIT_11s0016g02530.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MCEPGESDKDIARSFELDDSVIGSDKTSADYYFDSYSHFGIHEEMLKDVVRTKTYQNVIY
KNKFLFKNKVVLDVGAGTGILSLFCAKAGAKHVYAVECSHMADMAKEIVEVNGFSDVITV
MKGKVEEIVLPVAQVDIIISEWMGYFLLFENMLNTVLYARDKWLVNDGIVLPDKASLYLT
AIEDAEYKEDKIEFWNSVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMA
PGDASFTAPFKLVASRDDYIHALVAYFDVSFTKCHKLTGFSTGPRSRATHWKQTVLYLED
VLTICEGETVVGSMTVAQNKKNPRDVDIMIKYSFNGQRCQVSRTQYYKMR

Transcript Sequence

Transcript ID

VIT_11s0016g02530.t01
Transcript Infomation

cdna chromosome:12X:11:2016645:2022355:-1 gene:VIT_11s0016g02530 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AACTCATGGCTCGACGAGAGTCCCACAGCCACCACCCCCACCACCACCAAGGCACGCACA
CCAGATTCGAGGACGAACAGATCGAAGAAGCGACGGAGAGCTCCAACCTCGAAGATCCTA
TGTGCGACGCAGACGAGTCCACCATTGGCCAAGACAAAGCCATTGATGACACGATGTGCG
AGCCTGGCGAGTCTGATAAAGACATTGCACGATCTTTCGAGCTCGACGACTCCGTCATTG
GCAGTGATAAGACCAGCGCCGATTATTACTTCGACTCCTATTCTCACTTCGGTATTCATG
AAGAAATGTTGAAGGATGTTGTGAGAACTAAGACCTATCAAAATGTCATTTATAAGAATA
AGTTTCTGTTCAAGAACAAAGTAGTCCTTGATGTGGGAGCAGGGACTGGAATTCTGTCCC
TCTTTTGTGCAAAGGCAGGGGCAAAACATGTTTATGCGGTTGAGTGTTCCCATATGGCTG
ACATGGCAAAAGAGATTGTTGAAGTAAATGGATTTTCTGATGTTATAACAGTTATGAAAG
GAAAGGTTGAAGAAATTGTTCTTCCTGTTGCTCAAGTGGATATCATTATATCAGAATGGA
TGGGCTACTTTTTGTTGTTTGAGAATATGTTAAATACAGTCCTATATGCTCGTGATAAAT
GGCTTGTGAATGATGGTATTGTGCTGCCAGACAAAGCATCTCTCTATTTGACAGCCATTG
AGGATGCGGAGTACAAAGAAGACAAGATTGAATTTTGGAACAGTGTGTATGGCTTTGACA
TGAGCTGTATCAAGAAGCAAGCAATGATGGAACCACTTGTGGACACAGTTGATCAGAATC
AGATCGTCACAAACTGCCAGTTACTCAAGACTATGGACATCTCTAAAATGGCTCCTGGGG
ATGCTTCCTTCACAGCTCCTTTTAAGCTTGTGGCATCACGCGATGATTACATCCATGCTC
TTGTAGCATATTTTGATGTATCATTTACCAAGTGTCATAAATTGACAGGCTTCTCCACAG
GGCCAAGATCACGGGCTACACATTGGAAACAAACAGTCCTGTATCTGGAAGATGTGCTAA
CCATATGCGAAGGGGAGACAGTTGTTGGGAGCATGACAGTGGCCCAGAACAAGAAGAATC
CTCGTGACGTTGATATAATGATCAAATATTCCTTCAATGGTCAGCGTTGCCAGGTCTCAA
GAACTCAATATTACAAGATGCGTTAGTTTGTTGGAGATTGCTCCATAGCCAATGCTTTTT
GCCATTGCAAGATCGCAAAGAGTCTGCCAGAAACATGATTTGTTTCCTATTTAAATGCTT
GAGCAGCAATTATCATTATATTGAAAAAGGTGTATCATCGTTGTAACTGTAACTTGAGTT
TTCACACAAACACTAATGGTTATTGAAATGTAATGCTGAAATTTT