Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g02470.t01
CDS Infomation

cds chromosome:12X:11:1980374:1983937:-1 gene:VIT_11s0016g02470 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAAGAACAGAGAAGGAGGAGAGAGGGGCATGCTGTTGGATGGGCTCAGAGATTCC
ATGCCGGTGTATGTAAAGGAGCTAGTTGCTGGGGGTGTCGCTGGTGGTTTTGCTAAGACC
ATGGTTGCTCCACTCGAGCGTGTCAAGATTTTGTTTCAGACCAGAAAAGCAGAATTTCAA
AGCATAGGGCTGTTGGGATCCTTTAGAAAGATTGCAAAAACAGAAGGGGTGCTGGGTTTT
TACAGAGGGAATGGAGCAAGTGTTGCTCGAATTGTTCCTTATGCAGCACTGCATTATATG
GCTTATGAGCAATACCGGCGATGGATCATACTCAATTTCCCTGACATTAGAAGAGGGCCA
GTACTCGATCTCATGGCAGGATCATTTGCAGGAGGAACTGCTGTGCTTTTTACATACCCT
CTTGATCTAGTTCGGACCAAATTGGCTTACCAGGTTGTTGGATCAACAAAGCTGAACATC
AAAGGGATAGTCCATGCAGAACAGGCTTACAGAGGAATCCTTGATTGTTTCTCAAAGACC
TACAGAGAAGCCGGTGTAAGAGGGCTCTATCGCGGTGGGGCTCCAGCACTCTATGGCATC
TTCCCATATTCTGGTTTGAAGTTCTACTTCTACGAGGAGATGAAAAGCCATGTGCCTGAG
AAACACAAGAAAGACATAACAGTGAAACTAGCATGCGGCTCCGTCGCAGGCTTACTGGGT
CAGACATTAACTTACCCTCTTGATGTTGTTAGGCGGCAAATGCAGGTCCAACGGCTGTCA
GCATCACACATTGGAGATGTGAAAGGAACAATGGAAACCCTTGTTTCAATAGCTCAAACA
CAAGGATGGAAGCAGCTATTTTCAGGGCTGAGCATCAACTACTTGAAGGTTGTACCATCA
GTGGCAATTGGGTTTACAGTCTATGATATAATGAAATCATGGCTGCAAGTTCCATCGCGA
GATGACAATCTAATAGAAGTGGTGACAAACAAGAGGAATAGCCAACCATCATCCCTGCAC
TCGTGA

Peptide Sequence

PEP ID

VIT_11s0016g02470.t01
PEP Infomation

pep chromosome:12X:11:1980374:1983937:-1 gene:VIT_11s0016g02470 transcript:VIT_11s0016g02470.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEKNREGGERGMLLDGLRDSMPVYVKELVAGGVAGGFAKTMVAPLERVKILFQTRKAEFQ
SIGLLGSFRKIAKTEGVLGFYRGNGASVARIVPYAALHYMAYEQYRRWIILNFPDIRRGP
VLDLMAGSFAGGTAVLFTYPLDLVRTKLAYQVVGSTKLNIKGIVHAEQAYRGILDCFSKT
YREAGVRGLYRGGAPALYGIFPYSGLKFYFYEEMKSHVPEKHKKDITVKLACGSVAGLLG
QTLTYPLDVVRRQMQVQRLSASHIGDVKGTMETLVSIAQTQGWKQLFSGLSINYLKVVPS
VAIGFTVYDIMKSWLQVPSRDDNLIEVVTNKRNSQPSSLHS

Transcript Sequence

Transcript ID

VIT_11s0016g02470.t01
Transcript Infomation

cdna chromosome:12X:11:1980374:1983937:-1 gene:VIT_11s0016g02470 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTTCAATTCTTCTCCCCTTTGCCCATTCCTGCTGCTGCAACAATTACTCACACAATTCA
AAGCGGTCTTTGAAAATCTCTGTGCCCCATTTCTCTCTTCCAAGCGGTCTTAAATGGAGA
AGAACAGAGAAGGAGGAGAGAGGGGCATGCTGTTGGATGGGCTCAGAGATTCCATGCCGG
TGTATGTAAAGGAGCTAGTTGCTGGGGGTGTCGCTGGTGGTTTTGCTAAGACCATGGTTG
CTCCACTCGAGCGTGTCAAGATTTTGTTTCAGACCAGAAAAGCAGAATTTCAAAGCATAG
GGCTGTTGGGATCCTTTAGAAAGATTGCAAAAACAGAAGGGGTGCTGGGTTTTTACAGAG
GGAATGGAGCAAGTGTTGCTCGAATTGTTCCTTATGCAGCACTGCATTATATGGCTTATG
AGCAATACCGGCGATGGATCATACTCAATTTCCCTGACATTAGAAGAGGGCCAGTACTCG
ATCTCATGGCAGGATCATTTGCAGGAGGAACTGCTGTGCTTTTTACATACCCTCTTGATC
TAGTTCGGACCAAATTGGCTTACCAGGTTGTTGGATCAACAAAGCTGAACATCAAAGGGA
TAGTCCATGCAGAACAGGCTTACAGAGGAATCCTTGATTGTTTCTCAAAGACCTACAGAG
AAGCCGGTGTAAGAGGGCTCTATCGCGGTGGGGCTCCAGCACTCTATGGCATCTTCCCAT
ATTCTGGTTTGAAGTTCTACTTCTACGAGGAGATGAAAAGCCATGTGCCTGAGAAACACA
AGAAAGACATAACAGTGAAACTAGCATGCGGCTCCGTCGCAGGCTTACTGGGTCAGACAT
TAACTTACCCTCTTGATGTTGTTAGGCGGCAAATGCAGGTCCAACGGCTGTCAGCATCAC
ACATTGGAGATGTGAAAGGAACAATGGAAACCCTTGTTTCAATAGCTCAAACACAAGGAT
GGAAGCAGCTATTTTCAGGGCTGAGCATCAACTACTTGAAGGTTGTACCATCAGTGGCAA
TTGGGTTTACAGTCTATGATATAATGAAATCATGGCTGCAAGTTCCATCGCGAGATGACA
ATCTAATAGAAGTGGTGACAAACAAGAGGAATAGCCAACCATCATCCCTGCACTCGTGAC
ATTAGATCCCTTTTTCAACGGGAAAAAACATTCTTAAAGGTCATTGTTGATTTTTCTTTG
CCCTGTAGATTGTCATTTAAATCTCTCCCATATTTTTCTCAGGGCATTTCTGATTTGTAT
ATTCAATTCTTTAAGCTCTACCCTAGCATAGATGTAGGTCAAATCTCCCATTCTAATAAA
GCTCAGAGGAGAGGGAGTCACAGATTTTACAAGGAGAGATACTTGATGTAGCAAAGGTCA
TTGATTAGAATAATGAAGAATGCTTTCCCTACAGCAATTCCGAATGTAGCAAAGGTTATA
GGAAATATGGATATAGCTTATGCTGACCCATTGAATTTATTCCAATGTAATGGATGTTCA
AATTTCAGTACAAACATAAGGATTGTAAGATCAAAAGAAATCCAGACATTTACAAAGATC
AACTCCCATAAACAGCATTGGATTACACCAACTGCAAGGGG