Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g02460.t01
CDS Infomation

cds chromosome:12X:11:1978788:1980373:1 gene:VIT_11s0016g02460 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGTCTCTGATGTCCCTCAATCGCACTGGAAACTCCATAATCACTTCCAATTTCAAG
GCTCGAATCCCCGCTCACTCTTCTGCCTTACCTCTCAAGCCCATCTCTTCTTCTCCTCAA
AAACCCCCTCTAAAACTCCTCTGCACCTACGCTCTTCCCAACCACCAACCCACTAATAAG
CCCCGAGTCTTCCGCCGCCAAACCAACAGCACACACCCTCCGAAACAACACAATGGTCAA
AACCTGACTGGTACTCAGCTCAACAATGCCAACTACCCACAAACCGAAAACTTCACGGTA
GTACATTCTGGGGTTGATCTGATGGGGTTGTGCGAAGAGGGGAAGATTAGAGAAGCTGTT
GAGTATATGGGTCAAGGTGTTTGTGCTGAGTATGGGGTTTTTTGTGCAATGTTGAGTTCG
TGTGGGAAAACGAAATCGCTTGAAGTAGGGAGAAGGGTTCATGACTTGTTGGCGAGGTCG
AAATTCGGTGGGGATGTTGAATTGAATAATAAATTGATTGAAATGTATGGGAGGTGTGGG
AGTATGAGAGATGCGCGCAGGGTGTTTGATAGAATGCGCGAACGGAATATGAGTTCGTGG
CATTTAATGATAAATGGGTATGCTGCGAATGGGCAGGGAAGGGATGGATTGTTGTTGTTT
GAGCGAATGAGGAAGGTGGGGTTGCGTCCGGTTGGAGAGACTTTTGTGGCAGTGTTGTCG
GCGTGTGGTAGTGTAGAAGAAGGATTAATGTACTTCGAATTGATGAAGAAAGAGTGTGGA
ATTATACCAGGGATAGAGCATTATCTAGGAGTTATAGATGTTCTTGGGAAATTTGGTCAT
ATCAATGAAGCAGAGGAGTTTGTTGATAAAATGCCAATTGAACCCACTGCAGAAGTTTGG
GAGGCATTGAGAAATTTTGCTCGAATACATGGAGCTATCGAGCTTGAAGACCGGGCCGAG
GAGATGTTGGCTGCTCTTGATCCCTCTAAGGCCATCACGGACAAGATCCCAACGCCACCA
CAGAAAAAGCAGTTGGCAGTCAACATGCTTGAGGGCAAGAACAGGGTCAGTGAGTACCGG
AGCACAAATCCTTACAAGGGAGATGCGTATGAGAAATTAAAAGGATTGAATGGGCAGATG
AGAGAAGCCGGTTATGTCCCTGACACAAGATATGTGCTTCATGACATTGATCAGGAGGCA
AAAGAACAGGCCTTGCTCTATCACAGCGAGCGATTAGCAATTGCATATGGCCTGATCAGT
ACTCCAGCTAGAACACCTCTCAGGATCATTAAGAATCTTCGAATTTGTGGCGATTGCCAC
AATGCAATAAAAATTATGTCAAAGATTGTTGGGAGGGAGCTAATTGTTAGGGATAATAAG
CGGTTTCATCACTTCAAGGACGGCAAATGCTCTTGTGGGGATTACTGGTAA

Peptide Sequence

PEP ID

VIT_11s0016g02460.t01
PEP Infomation

pep chromosome:12X:11:1978788:1980373:1 gene:VIT_11s0016g02460 transcript:VIT_11s0016g02460.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASLMSLNRTGNSIITSNFKARIPAHSSALPLKPISSSPQKPPLKLLCTYALPNHQPTNK
PRVFRRQTNSTHPPKQHNGQNLTGTQLNNANYPQTENFTVVHSGVDLMGLCEEGKIREAV
EYMGQGVCAEYGVFCAMLSSCGKTKSLEVGRRVHDLLARSKFGGDVELNNKLIEMYGRCG
SMRDARRVFDRMRERNMSSWHLMINGYAANGQGRDGLLLFERMRKVGLRPVGETFVAVLS
ACGSVEEGLMYFELMKKECGIIPGIEHYLGVIDVLGKFGHINEAEEFVDKMPIEPTAEVW
EALRNFARIHGAIELEDRAEEMLAALDPSKAITDKIPTPPQKKQLAVNMLEGKNRVSEYR
STNPYKGDAYEKLKGLNGQMREAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS
TPARTPLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW

Transcript Sequence

Transcript ID

VIT_11s0016g02460.t01
Transcript Infomation

cdna chromosome:12X:11:1978788:1980373:1 gene:VIT_11s0016g02460 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGGGCTTGGCTTCACCTTCTCACTTTGATTCAAACCAATAGAAGAAGACGTCGTTTTGGA
ATGCTTATTTCCATATAAAGCATCAAACACCAACTCAATTACTTTTGATTCAACCAGCAA
TGGCGTCTCTGATGTCCCTCAATCGCACTGGAAACTCCATAATCACTTCCAATTTCAAGG
CTCGAATCCCCGCTCACTCTTCTGCCTTACCTCTCAAGCCCATCTCTTCTTCTCCTCAAA
AACCCCCTCTAAAACTCCTCTGCACCTACGCTCTTCCCAACCACCAACCCACTAATAAGC
CCCGAGTCTTCCGCCGCCAAACCAACAGCACACACCCTCCGAAACAACACAATGGTCAAA
ACCTGACTGGTACTCAGCTCAACAATGCCAACTACCCACAAACCGAAAACTTCACGGTAG
TACATTCTGGGGTTGATCTGATGGGGTTGTGCGAAGAGGGGAAGATTAGAGAAGCTGTTG
AGTATATGGGTCAAGGTGTTTGTGCTGAGTATGGGGTTTTTTGTGCAATGTTGAGTTCGT
GTGGGAAAACGAAATCGCTTGAAGTAGGGAGAAGGGTTCATGACTTGTTGGCGAGGTCGA
AATTCGGTGGGGATGTTGAATTGAATAATAAATTGATTGAAATGTATGGGAGGTGTGGGA
GTATGAGAGATGCGCGCAGGGTGTTTGATAGAATGCGCGAACGGAATATGAGTTCGTGGC
ATTTAATGATAAATGGGTATGCTGCGAATGGGCAGGGAAGGGATGGATTGTTGTTGTTTG
AGCGAATGAGGAAGGTGGGGTTGCGTCCGGTTGGAGAGACTTTTGTGGCAGTGTTGTCGG
CGTGTGGTAGTGTAGAAGAAGGATTAATGTACTTCGAATTGATGAAGAAAGAGTGTGGAA
TTATACCAGGGATAGAGCATTATCTAGGAGTTATAGATGTTCTTGGGAAATTTGGTCATA
TCAATGAAGCAGAGGAGTTTGTTGATAAAATGCCAATTGAACCCACTGCAGAAGTTTGGG
AGGCATTGAGAAATTTTGCTCGAATACATGGAGCTATCGAGCTTGAAGACCGGGCCGAGG
AGATGTTGGCTGCTCTTGATCCCTCTAAGGCCATCACGGACAAGATCCCAACGCCACCAC
AGAAAAAGCAGTTGGCAGTCAACATGCTTGAGGGCAAGAACAGGGTCAGTGAGTACCGGA
GCACAAATCCTTACAAGGGAGATGCGTATGAGAAATTAAAAGGATTGAATGGGCAGATGA
GAGAAGCCGGTTATGTCCCTGACACAAGATATGTGCTTCATGACATTGATCAGGAGGCAA
AAGAACAGGCCTTGCTCTATCACAGCGAGCGATTAGCAATTGCATATGGCCTGATCAGTA
CTCCAGCTAGAACACCTCTCAGGATCATTAAGAATCTTCGAATTTGTGGCGATTGCCACA
ATGCAATAAAAATTATGTCAAAGATTGTTGGGAGGGAGCTAATTGTTAGGGATAATAAGC
GGTTTCATCACTTCAAGGACGGCAAATGCTCTTGTGGGGATTACTGGTAAGTGTATCACT
CTTAACGTTGCCACAATAATTTGTTT