Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g02440.t01
CDS Infomation

cds chromosome:12X:11:1970528:1973278:1 gene:VIT_11s0016g02440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGACGACTGAGCCACCCATCGTCTCCAGGTTGAAGAGGGAAGATTGTAAACGCACC
AAACACGACTCTGAGTTCACCAAATGGAAGATTCTTGTTGGGCCTTCTGATTGGGAAGAC
CATTCGTCGAGGAAGGAAGGAGCAGAGAGATACAGAGTTCACAACCTCCCCTTATGCTGT
CATTGTCCAGGAGTGTATGAGCTTGGCATAAGCGTGTCTCCCACTGGTTTAGGTCGTGAG
GTTGGCAAGCTTGACCCTGCTCACATTGTTGTGGTTTACCTTGGACAAGCCGAAGATATT
AGGGCAAGGCTCCAGCATTATGGTCGTTCAGGTGCTCATTTGGCTAAAGTTGACTCAACT
GGTAACCCAAATAACTGTAAGAATATGCCTCTCCAAAGAGGGTCTGGATTGTTTGAAGGG
ATATTCTCAAGAGGTTACTCCATCGTCTTTAGATGGGCTCCAATAGAAAGCAAGAGGGAT
GCTGAGAGAACAGAATCTCGGCTGCTCAAGACATTTGATTATGCATGGAACAAAGGCAGT
AATGGTGCACGTCGCCCCAGTGATGTCCTCAGGAAACTTGAGAAAACTTCTTCAAGCACT
CCCCCATTTCCTAGTATTACTAGGAAGTTTCAAATGCTTGGCCAGAAGCAAGTGGGCATC
ATAATCAAAGCTAGCAAGCCATTTTTGCAGGAGAATGGGCTCAGTACTGATCAGGACATC
AATTCTCTGCTTGCCCGAGTTTTCAAATTTGGCAGATCACAGCCACGATTAGTCTCAGAC
AGAGTTGGTGTTACTGGTAACTATAATAGTACTTGTGGGGTGGCTTTAGGTGATGGAACA
ATTTGTGAAAGGCCACCAGTTGAAGGAAGAAAGCGGTGCGCTGAACACAAAGGAATGAAG
ACGAAGAGCTCCTTCTCAAAGCCGATTGTAGAAAGGAAACCACAAATGGTTGATTTAAAC
CGAGAGTCTGAAGGTCACAGTGCCCAGAGTTATGGCTATACAGTGAATTTTCAACTGGTT
GGGGGCAAATGTCCTGTGAATAAGGACTTCACCATTATTTGTGGAGTTATCTTGGATGAT
GGCTTTCCTTGTAAAAGGCAACCAGTTCTAGGGAGGAAAAGGTGTGAAGAGCATAAAGGA
ATGAGAACCAACGTTTCAATTTCAAACTCCACAGTAGGGAAATCCCATCACACATATGAA
AGCAAGTTGCAGCCCCAAGTTCTCCCAGACTGCAGGTCTTTTTCCAACACGGACTACGGT
ATTACTTGTGGAGTGGATTTAGGTCATGGGATTTTCTGTAAAAGACTGGCTGTTGCTGGA
AGAAAAAGGTGTGAGGAGCATAAAGGAATGAGGATCAACAGCCTCATCTCTACGCTAGCA
GGCGAAGACAAATCCCATGCTTTGGATATGGGTTCAGGATTCATCACTTATAACAACTCG
AATTATAACCATACTTCAACCTGTGGGATGACCTTAGGTGATGGTTCTATCTGCAAGAGA
CAACCAGTGGAAGGAAACAAGAGATGTTGGCAGCACAAAGGCATGAGGGTCAATTGTTCC
TCCTCTTGGTTTGGATCAGAAACAACTTTATGTGGCGTACTCCTACGGAATGGATCTGTG
TGCAGCAGAGTCCCTGCCCATGGAAGGAAGAGGTGTGAGCAGCACAAGGGGATGAGGCTA
TGA

Peptide Sequence

PEP ID

VIT_11s0016g02440.t01
PEP Infomation

pep chromosome:12X:11:1970528:1973278:1 gene:VIT_11s0016g02440 transcript:VIT_11s0016g02440.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVTTEPPIVSRLKREDCKRTKHDSEFTKWKILVGPSDWEDHSSRKEGAERYRVHNLPLCC
HCPGVYELGISVSPTGLGREVGKLDPAHIVVVYLGQAEDIRARLQHYGRSGAHLAKVDST
GNPNNCKNMPLQRGSGLFEGIFSRGYSIVFRWAPIESKRDAERTESRLLKTFDYAWNKGS
NGARRPSDVLRKLEKTSSSTPPFPSITRKFQMLGQKQVGIIIKASKPFLQENGLSTDQDI
NSLLARVFKFGRSQPRLVSDRVGVTGNYNSTCGVALGDGTICERPPVEGRKRCAEHKGMK
TKSSFSKPIVERKPQMVDLNRESEGHSAQSYGYTVNFQLVGGKCPVNKDFTIICGVILDD
GFPCKRQPVLGRKRCEEHKGMRTNVSISNSTVGKSHHTYESKLQPQVLPDCRSFSNTDYG
ITCGVDLGHGIFCKRLAVAGRKRCEEHKGMRINSLISTLAGEDKSHALDMGSGFITYNNS
NYNHTSTCGMTLGDGSICKRQPVEGNKRCWQHKGMRVNCSSSWFGSETTLCGVLLRNGSV
CSRVPAHGRKRCEQHKGMRL

Transcript Sequence

Transcript ID

VIT_11s0016g02440.t01
Transcript Infomation

cdna chromosome:12X:11:1970528:1973278:1 gene:VIT_11s0016g02440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACCGCCCGTCCGGAGGGGCTCCGGCGTTGTAGTCTTCCAATATCAAAACCACAGGAGCAT
TGTCGTTTAGCCTCGGGTGGCAATGGTGACGACTGAGCCACCCATCGTCTCCAGGTTGAA
GAGGGAAGATTGTAAACGCACCAAACACGACTCTGAGTTCACCAAATGGAAGATTCTTGT
TGGGCCTTCTGATTGGGAAGACCATTCGTCGAGGAAGGAAGGAGCAGAGAGATACAGAGT
TCACAACCTCCCCTTATGCTGTCATTGTCCAGGAGTGTATGAGCTTGGCATAAGCGTGTC
TCCCACTGGTTTAGGTCGTGAGGTTGGCAAGCTTGACCCTGCTCACATTGTTGTGGTTTA
CCTTGGACAAGCCGAAGATATTAGGGCAAGGCTCCAGCATTATGGTCGTTCAGGTGCTCA
TTTGGCTAAAGTTGACTCAACTGGTAACCCAAATAACTGTAAGAATATGCCTCTCCAAAG
AGGGTCTGGATTGTTTGAAGGGATATTCTCAAGAGGTTACTCCATCGTCTTTAGATGGGC
TCCAATAGAAAGCAAGAGGGATGCTGAGAGAACAGAATCTCGGCTGCTCAAGACATTTGA
TTATGCATGGAACAAAGGCAGTAATGGTGCACGTCGCCCCAGTGATGTCCTCAGGAAACT
TGAGAAAACTTCTTCAAGCACTCCCCCATTTCCTAGTATTACTAGGAAGTTTCAAATGCT
TGGCCAGAAGCAAGTGGGCATCATAATCAAAGCTAGCAAGCCATTTTTGCAGGAGAATGG
GCTCAGTACTGATCAGGACATCAATTCTCTGCTTGCCCGAGTTTTCAAATTTGGCAGATC
ACAGCCACGATTAGTCTCAGACAGAGTTGGTGTTACTGGTAACTATAATAGTACTTGTGG
GGTGGCTTTAGGTGATGGAACAATTTGTGAAAGGCCACCAGTTGAAGGAAGAAAGCGGTG
CGCTGAACACAAAGGAATGAAGACGAAGAGCTCCTTCTCAAAGCCGATTGTAGAAAGGAA
ACCACAAATGGTTGATTTAAACCGAGAGTCTGAAGGTCACAGTGCCCAGAGTTATGGCTA
TACAGTGAATTTTCAACTGGTTGGGGGCAAATGTCCTGTGAATAAGGACTTCACCATTAT
TTGTGGAGTTATCTTGGATGATGGCTTTCCTTGTAAAAGGCAACCAGTTCTAGGGAGGAA
AAGGTGTGAAGAGCATAAAGGAATGAGAACCAACGTTTCAATTTCAAACTCCACAGTAGG
GAAATCCCATCACACATATGAAAGCAAGTTGCAGCCCCAAGTTCTCCCAGACTGCAGGTC
TTTTTCCAACACGGACTACGGTATTACTTGTGGAGTGGATTTAGGTCATGGGATTTTCTG
TAAAAGACTGGCTGTTGCTGGAAGAAAAAGGTGTGAGGAGCATAAAGGAATGAGGATCAA
CAGCCTCATCTCTACGCTAGCAGGCGAAGACAAATCCCATGCTTTGGATATGGGTTCAGG
ATTCATCACTTATAACAACTCGAATTATAACCATACTTCAACCTGTGGGATGACCTTAGG
TGATGGTTCTATCTGCAAGAGACAACCAGTGGAAGGAAACAAGAGATGTTGGCAGCACAA
AGGCATGAGGGTCAATTGTTCCTCCTCTTGGTTTGGATCAGAAACAACTTTATGTGGCGT
ACTCCTACGGAATGGATCTGTGTGCAGCAGAGTCCCTGCCCATGGAAGGAAGAGGTGTGA
GCAGCACAAGGGGATGAGGCTATGA