Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g02400.t01
CDS Infomation

cds chromosome:12X:11:1922155:1943295:1 gene:VIT_11s0016g02400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATCGATCGGGCGCTGGAGAAGGAGTTCACGGAAAATGAACAAACCGGAGCCAGTGAT
GCTGGTAGCTTCAACAACAGTGTTGCGGAACAGCAGGCAGTTTTGGAAACTGTTGCTAGA
GTTAGGCCCAAGAAAAACGACACGAAGGAGGAGAAGTCATTTCAGCTTCACAATGTTTTC
AATTTGGATAATGAGAACAGACAAGAAGATACACCAACATTGATAGATCGAAAGGACAAT
GTTTTTATTATGTCCAATCCCAAGTCAAAGTACCCTGTGCTACAGTTAGACTTGAGATTG
ATATCAGATTTGGTTGTTGTCATTGTTTCTGCAACTTGTGGCGGCATCGCCTTTGCTTGT
GCTGGACAGCCGGTTATTACTGGATATCTACTGGCAGGATCTGTTATTGGACCTGGAGGT
TTAAGTTTTGTTAGTGAAATGGTGCAAGTTGAAACGGTAGCTCAGTTTGGTGTGATTTTT
CTTCTTTTTGCATTAGGCTTGGAGTTCTCCACGACAAAGCTTCGTGTCGTTCGGGCAGTT
GCTGTTTTAGGAGGTCTGCTCCAGATTTTCTTATTTATGTGCTTGTGTGGAATCACTGCC
TCGCTATGTGGTGGCAAACCTTCTGAGGGGGTATTTGTTGGTGTATTACTTTCCATGTCT
TCGACAGCAGTGGTTTTGAAATTTTTGATGGAAAGAAATAGTATCAGTGCTCTTCACGGT
CAGGTTACAGTTGGCACTCTTATTCTGCAGGATTGTGCTGTGGGCTTGCTATTTGCTCTT
CTTCCAGTCCTAGGTGGTACTTCGGGTATTCTTCAAGGAGTAATATCAATGACAAAATCG
TTGGTGGTTTTGATAACTTTTTTGGCCATTTTGTCAATACTATCTCGTACTTGTGTCCCT
TGGTTCCTTAAGCTGATGGTTAGCCTATCATCACAGACTAATGAACTTTATCAATTGGCT
TCAGTGGCATTCTGCTTACTCGTTGCTTGGTGTAGTGATAAGCTGGGTCTAAGCCTTGAA
CTTGGTTCCTTTGCTGCTGGAGTGATGATATCAACAACTGATCTTGCTCAACACACTCTT
GAACAAGTTGAGCCTATCCGCAACTTCTTTGCCGCTCTTTTTCTCGCCAGCATTGGGATG
TTGATACATGTTCATTTCCTTTGGAATCACGTTGATATTTTACTCGCAGCTGTTATATTG
GTGATCATTATAAAAACTATTGTGGTTTCTACAGTGGTCAAGGGATTTGGATACAACAAT
AAGACTTCACTTCTTGTTGGAATGTCTCTGGCACAAATTGGGGAGTTTGCTTTTGTTCTT
CTAAGCCGTGCTTCTAATCTTCATCTAGTTGAGGGCAAATTGTACTTACTGCTTCTCGGC
ACTACTGCTCTCAGTCTGGTCACAACACCATTGCTTTTCAAGCTGATTCCTGCTGTTGTA
CATCTTGGGGTACTGTTGCGGTGGTTCTCTCCTGATGTTCCAAGTGAGATTGGATTTAAA
GGAGATAGCTTTCGAGCAGACAGTGCTAAGCGTATTACTTTGATGGTCCAAGGCTCTCAT
GATTCATGA

Peptide Sequence

PEP ID

VIT_11s0016g02400.t01
PEP Infomation

pep chromosome:12X:11:1922155:1943295:1 gene:VIT_11s0016g02400 transcript:VIT_11s0016g02400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MIDRALEKEFTENEQTGASDAGSFNNSVAEQQAVLETVARVRPKKNDTKEEKSFQLHNVF
NLDNENRQEDTPTLIDRKDNVFIMSNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFAC
AGQPVITGYLLAGSVIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAV
AVLGGLLQIFLFMCLCGITASLCGGKPSEGVFVGVLLSMSSTAVVLKFLMERNSISALHG
QVTVGTLILQDCAVGLLFALLPVLGGTSGILQGVISMTKSLVVLITFLAILSILSRTCVP
WFLKLMVSLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTL
EQVEPIRNFFAALFLASIGMLIHVHFLWNHVDILLAAVILVIIIKTIVVSTVVKGFGYNN
KTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVV
HLGVLLRWFSPDVPSEIGFKGDSFRADSAKRITLMVQGSHDS

Transcript Sequence

Transcript ID

VIT_11s0016g02400.t01
Transcript Infomation

cdna chromosome:12X:11:1922155:1943295:1 gene:VIT_11s0016g02400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCTTCGTCTTCGCTCTTCGTTTTCTTCGTTGTTCTCCTCTGCCTCGCTTCTCGGCCGTCG
CACTCGCACACTGAGTCGAGTCTGTTGGAGGACACCAATGCGACGGCGGAGTCCAACGCC
TCGCGGTCGAGATCTCAGGACAGCTTCGCCGACATGATCGATCGGGCGCTGGAGAAGGAG
TTCACGGAAAATGAACAAACCGGAGCCAGTGATGCTGGTAGCTTCAACAACAGTGTTGCG
GAACAGCAGGCAGTTTTGGAAACTGTTGCTAGAGTTAGGCCCAAGAAAAACGACACGAAG
GAGGAGAAGTCATTTCAGCTTCACAATGTTTTCAATTTGGATAATGAGAACAGACAAGAA
GATACACCAACATTGATAGATCGAAAGGACAATGTTTTTATTATGTCCAATCCCAAGTCA
AAGTACCCTGTGCTACAGTTAGACTTGAGATTGATATCAGATTTGGTTGTTGTCATTGTT
TCTGCAACTTGTGGCGGCATCGCCTTTGCTTGTGCTGGACAGCCGGTTATTACTGGATAT
CTACTGGCAGGATCTGTTATTGGACCTGGAGGTTTAAGTTTTGTTAGTGAAATGGTGCAA
GTTGAAACGGTAGCTCAGTTTGGTGTGATTTTTCTTCTTTTTGCATTAGGCTTGGAGTTC
TCCACGACAAAGCTTCGTGTCGTTCGGGCAGTTGCTGTTTTAGGAGGTCTGCTCCAGATT
TTCTTATTTATGTGCTTGTGTGGAATCACTGCCTCGCTATGTGGTGGCAAACCTTCTGAG
GGGGTATTTGTTGGTGTATTACTTTCCATGTCTTCGACAGCAGTGGTTTTGAAATTTTTG
ATGGAAAGAAATAGTATCAGTGCTCTTCACGGTCAGGTTACAGTTGGCACTCTTATTCTG
CAGGATTGTGCTGTGGGCTTGCTATTTGCTCTTCTTCCAGTCCTAGGTGGTACTTCGGGT
ATTCTTCAAGGAGTAATATCAATGACAAAATCGTTGGTGGTTTTGATAACTTTTTTGGCC
ATTTTGTCAATACTATCTCGTACTTGTGTCCCTTGGTTCCTTAAGCTGATGGTTAGCCTA
TCATCACAGACTAATGAACTTTATCAATTGGCTTCAGTGGCATTCTGCTTACTCGTTGCT
TGGTGTAGTGATAAGCTGGGTCTAAGCCTTGAACTTGGTTCCTTTGCTGCTGGAGTGATG
ATATCAACAACTGATCTTGCTCAACACACTCTTGAACAAGTTGAGCCTATCCGCAACTTC
TTTGCCGCTCTTTTTCTCGCCAGCATTGGGATGTTGATACATGTTCATTTCCTTTGGAAT
CACGTTGATATTTTACTCGCAGCTGTTATATTGGTGATCATTATAAAAACTATTGTGGTT
TCTACAGTGGTCAAGGGATTTGGATACAACAATAAGACTTCACTTCTTGTTGGAATGTCT
CTGGCACAAATTGGGGAGTTTGCTTTTGTTCTTCTAAGCCGTGCTTCTAATCTTCATCTA
GTTGAGGGCAAATTGTACTTACTGCTTCTCGGCACTACTGCTCTCAGTCTGGTCACAACA
CCATTGCTTTTCAAGCTGATTCCTGCTGTTGTACATCTTGGGGTACTGTTGCGGTGGTTC
TCTCCTGATGTTCCAAGTGAGATTGGATTTAAAGGAGATAGCTTTCGAGCAGACAGTGCT
AAGCGTATTACTTTGATGGTCCAAGGCTCTCATGATTCATGATATTAAATAAAACATGAA
CCAGAAAAATGCAAATTTCAGGCTTTACCTGATGGGCTTCTTATACTCTGGAGGACAGGT
GCCTAAAAGTGCAAAGGAGGTTGACTGAGTGAACAAAATTTTCATATTAGAAAGCTCCTC
ATATGTTGCCTACATTACATATGTATTTCTGACAAAGCCAGTGGAAGAAAGTGCCAACAG
AGATGAAGAAATGAAGAAGCCCTGTGGATAGAACCGTTTGCCAACTTTCACTAACCTCTA
ATTCAGGTCATTGCGATTCTCTCAGATGACCTATTTTGTGTAAAATAGCATCCATTTTAT
TGTGTAATTCTTTTCAAATTTTCCCCTTTTTTCCTTTTTGGCTTTAATTTGATGGCTTTC
AATTCTTTTTTCATTTCCTTAAGATAAATGTCAACTATCAATGCTGTTATTAAATGCACA
AATGTATTAACTGA