Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g02260.t01
CDS Infomation

cds chromosome:12X:11:1846432:1850194:1 gene:VIT_11s0016g02260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGGTGGTTCAAAAAGGTTTGTTGGATGACACTTTTCCCCTCAAAGGAGGTGGGCAT
GTGCACATGAAGTTGCAGTTCATCCTTAGTGAAGAAGAGCGCAATCGAATCCGTATAATG
AGAGAATCTGCATTGAAAAAGAAACACAGTGGGCTTTCAGGAACTGCTAGTTTGTCATCT
TTGTCAATCAACAAGAAAGTTTCAGAAAGCATCAGAGAGATTGCTAGCCAAGCTGGTCTG
GAACAAAATCCTGTGAATTTGAATGGGGAGCCACAATCTGGTGCTGATAAGATAGAAGGA
ACTCAGCTTGATGACAGTTCAACGATCCTAAATGATACAGATAGAAGTGGAGAGAGTTTG
TTGACAGCAGAAGTTTCACAGGAGGCTGGAGCCCACCATCTAACTGAATTAAAACACACA
GATTTAGATGAGAAATTTGAGGCTCAATCACCATTCTCAGATTTTCCTGTGAAGCCCATT
TTTTCAGATGGAACTTCATCTATGTCAGGATGTTTGGAATCTGTTACCACAGATAGTAAT
TCAGCTTCTCCAAGGCTGGAGGAAAATCATGCTGACAACACTGAGAAACAGAGTTCATTG
AGGAAAACTCCCAGTAATGTAAGGAAAATGATAAGTGCCTTTGAAAATAGTCTAACTCAG
GAAATGGGGCATCGTGTTGCGCCACCAGTTACGAAATCTCAATCAACCAAGAGTTGGAGG
GAAGTTCTTTTAAGGGGTCCACAAAAATTAAAGGAAACTGAGACATGGAACCCTAAAGTG
ACACAATCAACTTCAGAAGAGGCTAAAGACTTTGTGCTTAAGGGTGAGTTTCAACAAACT
GCAGCATATATCAGAAAAAGAGGAGAGCAAATTGATTCTGATAGAGCTATGGATAAAAGT
AAAGCACCCCTGTATGCTGGGCAGTCAAAGGAGCTAAGTGCAAAACACATCCAATCTAAA
AATGAGACGCCCAGTGATAAAAATAGACAAGTACACAAAAAGGAAGAGAGAAAATCTTTT
GAAAATTTGATTAAAAAATTCCCAATTGAAACAGCTACAGCTTCAGGAGGAATATTTAAT
CGTCAGGGTAGGCTTCAACCTTCTAATTTGGTCACTGATGAGAGAGATTCTGGTGGCACT
TCAGTTATAGAGAAGGATGGAGTAGGAGTTCAATCAAGATTTTCAAGTGAGATCATTAGT
CAGGGAGGTACAGAGAATACACCAAAACCAGTACTATATTGTAAAGATGAGAACTTCAGC
TTTGAAAGCTGTGGCAGCTGTATATTCCTAGATGATACAAGACGCTTGTGTATAACAACC
AGCGATAAACAAGTGATGAATGTAATGGGAGGTTCCCCCACTGAAGTGGATATCCATCAA
AGAAAGCTTAAGGTGCATGGAAGCTCTGATATTGAAGGGAAGCAAGCCCAGAAAACTTCT
CACAGAGTGAAAAAAAGGCTTGAGAGTTCTGCAGACGTCGAACCTTCTAGAGGCCCAGTT
GCACGGGCGATAAAAGTTGCAATAATGGCAGGCTTTGGAACATTTGTTTTCCTTACCAGA
CAAAGAAGTAGCAGGTCTATCTGGTCACTGAGCTGA

Peptide Sequence

PEP ID

VIT_11s0016g02260.t01
PEP Infomation

pep chromosome:12X:11:1846432:1850194:1 gene:VIT_11s0016g02260 transcript:VIT_11s0016g02260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLVVQKGLLDDTFPLKGGGHVHMKLQFILSEEERNRIRIMRESALKKKHSGLSGTASLSS
LSINKKVSESIREIASQAGLEQNPVNLNGEPQSGADKIEGTQLDDSSTILNDTDRSGESL
LTAEVSQEAGAHHLTELKHTDLDEKFEAQSPFSDFPVKPIFSDGTSSMSGCLESVTTDSN
SASPRLEENHADNTEKQSSLRKTPSNVRKMISAFENSLTQEMGHRVAPPVTKSQSTKSWR
EVLLRGPQKLKETETWNPKVTQSTSEEAKDFVLKGEFQQTAAYIRKRGEQIDSDRAMDKS
KAPLYAGQSKELSAKHIQSKNETPSDKNRQVHKKEERKSFENLIKKFPIETATASGGIFN
RQGRLQPSNLVTDERDSGGTSVIEKDGVGVQSRFSSEIISQGGTENTPKPVLYCKDENFS
FESCGSCIFLDDTRRLCITTSDKQVMNVMGGSPTEVDIHQRKLKVHGSSDIEGKQAQKTS
HRVKKRLESSADVEPSRGPVARAIKVAIMAGFGTFVFLTRQRSSRSIWSLS

Transcript Sequence

Transcript ID

VIT_11s0016g02260.t01
Transcript Infomation

cdna chromosome:12X:11:1846432:1850194:1 gene:VIT_11s0016g02260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGGTGGTTCAAAAAGGTTTGTTGGATGACACTTTTCCCCTCAAAGGAGGTGGGCAT
GTGCACATGAAGTTGCAGTTCATCCTTAGTGAAGAAGAGCGCAATCGAATCCGTATAATG
AGAGAATCTGCATTGAAAAAGAAACACAGTGGGCTTTCAGGAACTGCTAGTTTGTCATCT
TTGTCAATCAACAAGAAAGTTTCAGAAAGCATCAGAGAGATTGCTAGCCAAGCTGGTCTG
GAACAAAATCCTGTGAATTTGAATGGGGAGCCACAATCTGGTGCTGATAAGATAGAAGGA
ACTCAGCTTGATGACAGTTCAACGATCCTAAATGATACAGATAGAAGTGGAGAGAGTTTG
TTGACAGCAGAAGTTTCACAGGAGGCTGGAGCCCACCATCTAACTGAATTAAAACACACA
GATTTAGATGAGAAATTTGAGGCTCAATCACCATTCTCAGATTTTCCTGTGAAGCCCATT
TTTTCAGATGGAACTTCATCTATGTCAGGATGTTTGGAATCTGTTACCACAGATAGTAAT
TCAGCTTCTCCAAGGCTGGAGGAAAATCATGCTGACAACACTGAGAAACAGAGTTCATTG
AGGAAAACTCCCAGTAATGTAAGGAAAATGATAAGTGCCTTTGAAAATAGTCTAACTCAG
GAAATGGGGCATCGTGTTGCGCCACCAGTTACGAAATCTCAATCAACCAAGAGTTGGAGG
GAAGTTCTTTTAAGGGGTCCACAAAAATTAAAGGAAACTGAGACATGGAACCCTAAAGTG
ACACAATCAACTTCAGAAGAGGCTAAAGACTTTGTGCTTAAGGGTGAGTTTCAACAAACT
GCAGCATATATCAGAAAAAGAGGAGAGCAAATTGATTCTGATAGAGCTATGGATAAAAGT
AAAGCACCCCTGTATGCTGGGCAGTCAAAGGAGCTAAGTGCAAAACACATCCAATCTAAA
AATGAGACGCCCAGTGATAAAAATAGACAAGTACACAAAAAGGAAGAGAGAAAATCTTTT
GAAAATTTGATTAAAAAATTCCCAATTGAAACAGCTACAGCTTCAGGAGGAATATTTAAT
CGTCAGGGTAGGCTTCAACCTTCTAATTTGGTCACTGATGAGAGAGATTCTGGTGGCACT
TCAGTTATAGAGAAGGATGGAGTAGGAGTTCAATCAAGATTTTCAAGTGAGATCATTAGT
CAGGGAGGTACAGAGAATACACCAAAACCAGTACTATATTGTAAAGATGAGAACTTCAGC
TTTGAAAGCTGTGGCAGCTGTATATTCCTAGATGATACAAGACGCTTGTGTATAACAACC
AGCGATAAACAAGTGATGAATGTAATGGGAGGTTCCCCCACTGAAGTGGATATCCATCAA
AGAAAGCTTAAGGTGCATGGAAGCTCTGATATTGAAGGGAAGCAAGCCCAGAAAACTTCT
CACAGAGTGAAAAAAAGGCTTGAGAGTTCTGCAGACGTCGAACCTTCTAGAGGCCCAGTT
GCACGGGCGATAAAAGTTGCAATAATGGCAGGCTTTGGAACATTTGTTTTCCTTACCAGA
CAAAGAAGTAGCAGGTCTATCTGGTCACTGAGCTGATGTAAATTTCTGTGGATTAACATG
CAAATAATAATTTTTTTCCATGGGTTCCATAGAATTTTTGGCATGTATACCATGTATTTT
CAAAAACAGTTTTTTATTCTTTTGTAACAAAACAAAAAACAAGTTTAGCAACTAGAAAAT
AGAAGACGGTCTTCTTTATTAAAAACAGAAAATAGA