Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g02240.t01
CDS Infomation

cds chromosome:12X:11:1835708:1837177:-1 gene:VIT_11s0016g02240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATCTCACTCCTCAGAAGAACCAAGCTCCTAACCTTAACCCTAACCTCAAACCCTAGA
ACCCTCCGCCCATTTCTCCGTTTTCTCTCATCTTCCTCCAAATTCCCCGAATATGAAATG
CCCTCGGTCACATGGGGCGTCGTCCTAGGCCGCAAAGAGAGACTAGTCTCTCGTGTTATC
ATCTCCGACTACCTCAAAACCCTCGGCATCATCCCAGATGAGCTCGAACAAGTTGAACTC
CCCTCTACGGTCGAAGTCATGCGAGAACGGGTGGAATTTCTCCAGAAACTGGGAGTCACC
ATTGACCACTTAAATGAGTACCCGTTAATGCTCGGATGCAGTGTCCGAAAAAATATGATT
CCAGTTTTGGGTTATTTGGAGAAAATCGGGATTCCTCGATCGAAACTTGGTGAATTCGTG
GTGAATTACCCGCAAGTGTTACATGCCAGCGTGGTGGTTGAATTGGCTCCTGTAGTGAAG
TTCCTTAGAGGGCTTGATGTGGATAAGCAGGACATCGGTTATGTCTTGATGAAGTATCCT
GAGCTTTTAGGGTTTAAGTTGGAGGGAACTATGAGCACTTCTGTGGCCTATTTAGTGAGT
ATTGGAGTGAGTCCGAGGGATATTGGACCGATGGTGACACAGTATCCCTATTTTTTAGGA
ATGAGAGTGGGGACTGTGATTAAACCCATTGTTGATTACTTGGTTTCATTGGGTTTACCC
AAGAAGGTGTTGGCAAGGATGTTTGAGAAGCGGGCATATGTGCTTGGGTACGATTTGGAG
GAGTGTATTAAGCCCAATGTGGATTGTTTGGTTAGCTTTGGGATTAGGAGGGAGGCGCTT
GCTTCGGTTATAGCACAGTTCCCACAAATTCTTGGGTTGCCTTTGAAAGCTAAGTTGTCA
TCACAACAGTACTTCTTTAATTTGAAGCTCAAGATTGATCCGGATGGTTTTGCTAGAGTG
ATTGAGAGGATGCCACAAATAGTTAGTCTTAACCAGAATGTAATTATGAAACCTGTTGAG
TTCCTCCTTGGGAGAGGAATACCAGCTGTGGATGTGGCAAAGATGGTTGTGAAATGTCCC
CAGTTAGTGGCATTGCGGGTTGAGCTAATGAAAAATGGCTATTACTTTTTTAAAAGTGAG
ATGGGGAGACAGGTGAAAGAGCTTGTGGAGTTTCCAGAATACTTTACCTATAGTTTGGAA
TCTCGGATCAAACCCAGGTATCAGAGGTTGCAAAGCAAGGGGGTGAGGAGTTCACTGGAT
TGGTTCCTGAACTGTAGTGACCAGAGATTTGAAGAGAGACTACAGGCTGATTACATTGAA
ATGGAGACTATTGGTCCATCATTTTGTATGGGTGGGAAATTGCAGTTACCGGGGAATGAG
GTTGTGTCAGATGAGGAAGATGAGAGCGATGATGAAGAACTTTACAGACGCACTGTTTCC
CTTTAG

Peptide Sequence

PEP ID

VIT_11s0016g02240.t01
PEP Infomation

pep chromosome:12X:11:1835708:1837177:-1 gene:VIT_11s0016g02240 transcript:VIT_11s0016g02240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MISLLRRTKLLTLTLTSNPRTLRPFLRFLSSSSKFPEYEMPSVTWGVVLGRKERLVSRVI
ISDYLKTLGIIPDELEQVELPSTVEVMRERVEFLQKLGVTIDHLNEYPLMLGCSVRKNMI
PVLGYLEKIGIPRSKLGEFVVNYPQVLHASVVVELAPVVKFLRGLDVDKQDIGYVLMKYP
ELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYFLGMRVGTVIKPIVDYLVSLGLP
KKVLARMFEKRAYVLGYDLEECIKPNVDCLVSFGIRREALASVIAQFPQILGLPLKAKLS
SQQYFFNLKLKIDPDGFARVIERMPQIVSLNQNVIMKPVEFLLGRGIPAVDVAKMVVKCP
QLVALRVELMKNGYYFFKSEMGRQVKELVEFPEYFTYSLESRIKPRYQRLQSKGVRSSLD
WFLNCSDQRFEERLQADYIEMETIGPSFCMGGKLQLPGNEVVSDEEDESDDEELYRRTVS
L

Transcript Sequence

Transcript ID

VIT_11s0016g02240.t01
Transcript Infomation

cdna chromosome:12X:11:1835708:1837177:-1 gene:VIT_11s0016g02240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTGCGATTCACATTTCATTGCAAAATGATCTCACTCCTCAGAAGAACCAAGCTCCTAACC
TTAACCCTAACCTCAAACCCTAGAACCCTCCGCCCATTTCTCCGTTTTCTCTCATCTTCC
TCCAAATTCCCCGAATATGAAATGCCCTCGGTCACATGGGGCGTCGTCCTAGGCCGCAAA
GAGAGACTAGTCTCTCGTGTTATCATCTCCGACTACCTCAAAACCCTCGGCATCATCCCA
GATGAGCTCGAACAAGTTGAACTCCCCTCTACGGTCGAAGTCATGCGAGAACGGGTGGAA
TTTCTCCAGAAACTGGGAGTCACCATTGACCACTTAAATGAGTACCCGTTAATGCTCGGA
TGCAGTGTCCGAAAAAATATGATTCCAGTTTTGGGTTATTTGGAGAAAATCGGGATTCCT
CGATCGAAACTTGGTGAATTCGTGGTGAATTACCCGCAAGTGTTACATGCCAGCGTGGTG
GTTGAATTGGCTCCTGTAGTGAAGTTCCTTAGAGGGCTTGATGTGGATAAGCAGGACATC
GGTTATGTCTTGATGAAGTATCCTGAGCTTTTAGGGTTTAAGTTGGAGGGAACTATGAGC
ACTTCTGTGGCCTATTTAGTGAGTATTGGAGTGAGTCCGAGGGATATTGGACCGATGGTG
ACACAGTATCCCTATTTTTTAGGAATGAGAGTGGGGACTGTGATTAAACCCATTGTTGAT
TACTTGGTTTCATTGGGTTTACCCAAGAAGGTGTTGGCAAGGATGTTTGAGAAGCGGGCA
TATGTGCTTGGGTACGATTTGGAGGAGTGTATTAAGCCCAATGTGGATTGTTTGGTTAGC
TTTGGGATTAGGAGGGAGGCGCTTGCTTCGGTTATAGCACAGTTCCCACAAATTCTTGGG
TTGCCTTTGAAAGCTAAGTTGTCATCACAACAGTACTTCTTTAATTTGAAGCTCAAGATT
GATCCGGATGGTTTTGCTAGAGTGATTGAGAGGATGCCACAAATAGTTAGTCTTAACCAG
AATGTAATTATGAAACCTGTTGAGTTCCTCCTTGGGAGAGGAATACCAGCTGTGGATGTG
GCAAAGATGGTTGTGAAATGTCCCCAGTTAGTGGCATTGCGGGTTGAGCTAATGAAAAAT
GGCTATTACTTTTTTAAAAGTGAGATGGGGAGACAGGTGAAAGAGCTTGTGGAGTTTCCA
GAATACTTTACCTATAGTTTGGAATCTCGGATCAAACCCAGGTATCAGAGGTTGCAAAGC
AAGGGGGTGAGGAGTTCACTGGATTGGTTCCTGAACTGTAGTGACCAGAGATTTGAAGAG
AGACTACAGGCTGATTACATTGAAATGGAGACTATTGGTCCATCATTTTGTATGGGTGGG
AAATTGCAGTTACCGGGGAATGAGGTTGTGTCAGATGAGGAAGATGAGAGCGATGATGAA
GAACTTTACAGACGCACTGTTTCCCTTTAG