Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g02170.t01
CDS Infomation

cds chromosome:12X:11:1774972:1783050:1 gene:VIT_11s0016g02170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGTCTCAGACGGTGAAAAAGAAGAGAGGAAGGAAGCCTAAGGTCAGGGACTACTAC
GAAGGCGCCGCAGGAGGGAAGCGCGGCGGCGGAGCCGGAGAGGGAGACGGAGGCGGAATG
AGGGAGAGGGCAAAGTCCGGCCAGCAGCAGCCTGTCGACGACAGCTACAGCCGGTGGAAG
AACGTTGTTCCGGTCATCTACGACTGGCTCGCTAATCATAACCTCGTTTGGCCTTCGCTG
TCTTGCCGGTGGGGTCCTCAGTTCGAACATGGTAATCATAAGAATCGACAGCGCCTCTAT
CTCTCTGAACAGACTGATGGTACTGTTCCCAATACTCTGGTGATTGCAAACTGTGAAATT
GTCAAACCAAGGGTAGCAGCTGCAGAATACATATCAGCGTTCAATGAAGAAGCACGTTCA
CCCTTTGTTAAGAAGCATAAGACCATCCTTCATCCTGGAGAGGTTAACAGAATCCGGGAA
CTCCCACAAAGCAATCGGATAGTAGCCACCCATACCGACTGTCCTGAGGTTTTCATTTGG
GACATTGAAGCTCAACCAAATCGCCATGCTGTCCTTGGTGCTGCAGTTTCTCGCCCAGAT
TTGATATTGACTGGACATCAAGATAATGCAGAATTTGCACTAGCGATGTGTCCTGCTGAA
CCCTTTGTGCTTTCTGGAGGGAAGGACAAGTCCGTAGTTTTGTGGAGTATTCAAGACCAT
ATATCAACATTGGCCACTGACTCAGAAACCACTAAACCTCCTGGATCTGGTGGATCAATC
ATCAAATCTAACTCTAACCCCAGTGAGGGTAACGATAAGCCTGCTGATAGTCCATCTATT
GGACCTCGAGGGATATTCCATGGGCATGAGGATACAGTTGAAGATGTGCAGTTCTGTCCT
TCCAGTGCACAGGAGTTTTGTAGCGTAGGTGATGACTCTTGCCTCATATTATGGGACGCA
CGAGTTGGTTTCAGCCCAGTTGTTAAGGTTGAAAAAGCACATAATGCTGATCTTCATTGT
GTTGATTGGAATCCTCATGACCAGAATCTTATCCTAACTGGGTCAGCAGATAATTCTGTT
TGCATGTTCGATCGCCGAAATCTCACCTCCGGCGGAGTTGGCTCACCAATCCATAAATTT
GAGGATCACAAAGCTGCTGTCCTTTGTGTGCAGTGGTGCCCAGATAAATCATCTGTATTT
GGGAGTTCTGCTGAGGATGGTTTATTGAACATTTGGGATCATCAATTGGTGGGTAAAAAG
AAAGAGGGTGGGCCAAGAACACCAACTTCTGCTTCAGGCTTGTTTTTCAAACATGCTGGT
CACAGGGATAAAGTTGTTGACTTTCATTGGAATGCATCCGATCCCTGGACTGTTGTTAGT
GTATCTGATGACTGTGATGTTAGCGGTGGGGGTGGAACGTTGCAGATATGGCGCATGAGC
GATATGATATACAGGGACGAAGATGCGGTGTTGGCTGAGCTCAGGAACTTCAAATCTCAT
GTAGCTGAATGCCCTTCATGGCAGTAG

Peptide Sequence

PEP ID

VIT_11s0016g02170.t01
PEP Infomation

pep chromosome:12X:11:1774972:1783050:1 gene:VIT_11s0016g02170 transcript:VIT_11s0016g02170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MESQTVKKKRGRKPKVRDYYEGAAGGKRGGGAGEGDGGGMRERAKSGQQQPVDDSYSRWK
NVVPVIYDWLANHNLVWPSLSCRWGPQFEHGNHKNRQRLYLSEQTDGTVPNTLVIANCEI
VKPRVAAAEYISAFNEEARSPFVKKHKTILHPGEVNRIRELPQSNRIVATHTDCPEVFIW
DIEAQPNRHAVLGAAVSRPDLILTGHQDNAEFALAMCPAEPFVLSGGKDKSVVLWSIQDH
ISTLATDSETTKPPGSGGSIIKSNSNPSEGNDKPADSPSIGPRGIFHGHEDTVEDVQFCP
SSAQEFCSVGDDSCLILWDARVGFSPVVKVEKAHNADLHCVDWNPHDQNLILTGSADNSV
CMFDRRNLTSGGVGSPIHKFEDHKAAVLCVQWCPDKSSVFGSSAEDGLLNIWDHQLVGKK
KEGGPRTPTSASGLFFKHAGHRDKVVDFHWNASDPWTVVSVSDDCDVSGGGGTLQIWRMS
DMIYRDEDAVLAELRNFKSHVAECPSWQ

Transcript Sequence

Transcript ID

VIT_11s0016g02170.t01
Transcript Infomation

cdna chromosome:12X:11:1774972:1783050:1 gene:VIT_11s0016g02170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGTCTCAGACGGTGAAAAAGAAGAGAGGAAGGAAGCCTAAGGTCAGGGACTACTAC
GAAGGCGCCGCAGGAGGGAAGCGCGGCGGCGGAGCCGGAGAGGGAGACGGAGGCGGAATG
AGGGAGAGGGCAAAGTCCGGCCAGCAGCAGCCTGTCGACGACAGCTACAGCCGGTGGAAG
AACGTTGTTCCGGTCATCTACGACTGGCTCGCTAATCATAACCTCGTTTGGCCTTCGCTG
TCTTGCCGGTGGGGTCCTCAGTTCGAACATGGTAATCATAAGAATCGACAGCGCCTCTAT
CTCTCTGAACAGACTGATGGTACTGTTCCCAATACTCTGGTGATTGCAAACTGTGAAATT
GTCAAACCAAGGGTAGCAGCTGCAGAATACATATCAGCGTTCAATGAAGAAGCACGTTCA
CCCTTTGTTAAGAAGCATAAGACCATCCTTCATCCTGGAGAGGTTAACAGAATCCGGGAA
CTCCCACAAAGCAATCGGATAGTAGCCACCCATACCGACTGTCCTGAGGTTTTCATTTGG
GACATTGAAGCTCAACCAAATCGCCATGCTGTCCTTGGTGCTGCAGTTTCTCGCCCAGAT
TTGATATTGACTGGACATCAAGATAATGCAGAATTTGCACTAGCGATGTGTCCTGCTGAA
CCCTTTGTGCTTTCTGGAGGGAAGGACAAGTCCGTAGTTTTGTGGAGTATTCAAGACCAT
ATATCAACATTGGCCACTGACTCAGAAACCACTAAACCTCCTGGATCTGGTGGATCAATC
ATCAAATCTAACTCTAACCCCAGTGAGGGTAACGATAAGCCTGCTGATAGTCCATCTATT
GGACCTCGAGGGATATTCCATGGGCATGAGGATACAGTTGAAGATGTGCAGTTCTGTCCT
TCCAGTGCACAGGAGTTTTGTAGCGTAGGTGATGACTCTTGCCTCATATTATGGGACGCA
CGAGTTGGTTTCAGCCCAGTTGTTAAGGTTGAAAAAGCACATAATGCTGATCTTCATTGT
GTTGATTGGAATCCTCATGACCAGAATCTTATCCTAACTGGGTCAGCAGATAATTCTGTT
TGCATGTTCGATCGCCGAAATCTCACCTCCGGCGGAGTTGGCTCACCAATCCATAAATTT
GAGGATCACAAAGCTGCTGTCCTTTGTGTGCAGTGGTGCCCAGATAAATCATCTGTATTT
GGGAGTTCTGCTGAGGATGGTTTATTGAACATTTGGGATCATCAATTGGTGGGTAAAAAG
AAAGAGGGTGGGCCAAGAACACCAACTTCTGCTTCAGGCTTGTTTTTCAAACATGCTGGT
CACAGGGATAAAGTTGTTGACTTTCATTGGAATGCATCCGATCCCTGGACTGTTGTTAGT
GTATCTGATGACTGTGATGTTAGCGGTGGGGGTGGAACGTTGCAGATATGGCGCATGAGC
GATATGATATACAGGGACGAAGATGCGGTGTTGGCTGAGCTCAGGAACTTCAAATCTCAT
GTAGCTGAATGCCCTTCATGGCAGTAGGAGAATCAAAAAGCTATGCATGACATGCTTTGC
CAAGTCAGTGATAAAGACTTTGGAAGACTAAATTTCTCCATGTCAATTAAGCTGTTTCTG
TGTATGCTTTATGTAAGATGATGTTTTAGGAGATTTAAACCCATGCAATTTGGATGTTTA
AAATTCAATCTGACCTCCTATGAATT