Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g02120.t01
CDS Infomation

cds chromosome:12X:11:1713099:1719827:-1 gene:VIT_11s0016g02120 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation machinery-associated protein 22 [Source:UniProtKB/TrEMBL;Acc:D7TB70]
Sequence

ATGGCGGAGAAACCCCAGCCAGTTCGAGTACTCTACTGTCAGGTTTGCAGTTTACCAGCG
GAGTACTGTGAATTTGGATCCGATTTCGAGAAATGCAAGCCCTGGTTGATCCAAAACGCG
CCTGATCTCTACCCCGATCTCCTTAAAGAGGCTGATTCAAAGGAAGCTGATAAAGTTGCT
CAGCAATTACAGTCGACTGCTCTTTCTTCTGGTTCCGCCGATGGATCGGCTCCTTCTGGT
GGTGCTTCAGCATCTAAGCAAGAAGAAGTAAAACGTCTTCCTGGTGGGAAGATAAAAAGG
AAAGAGAAGCAAGAAGTTGTTATTGAGAAGATTGTACGTAATAAGCGAAAATGTATCACC
ACTGTGAAGGGGCTGGAACTCTTTGGTATTAAACTTAGTGATGCTTCAAAGAAGCTTGGG
AAAAAGTTCGCTACAGGAGCATCTGTTGTCAAGGGTCCAACTGAGAAGGAGCAAATTGAT
GTCCAAGGAGACATAGCCTATGACATTGTGGAGTTTATTACAGAAACATGGCCTGATGTC
CCCGAAACTGCAATTTTCTTCATTGAAGATGGGAGAAAGGTGGCAGCCGCCTGA

Peptide Sequence

PEP ID

VIT_11s0016g02120.t01
PEP Infomation

pep chromosome:12X:11:1713099:1719827:-1 gene:VIT_11s0016g02120 transcript:VIT_11s0016g02120.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation machinery-associated protein 22 [Source:UniProtKB/TrEMBL;Acc:D7TB70]
Sequence

MAEKPQPVRVLYCQVCSLPAEYCEFGSDFEKCKPWLIQNAPDLYPDLLKEADSKEADKVA
QQLQSTALSSGSADGSAPSGGASASKQEEVKRLPGGKIKRKEKQEVVIEKIVRNKRKCIT
TVKGLELFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVEFITETWPDV
PETAIFFIEDGRKVAAA

Transcript Sequence

Transcript ID

VIT_11s0016g02120.t01
Transcript Infomation

cdna chromosome:12X:11:1713099:1719827:-1 gene:VIT_11s0016g02120 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation machinery-associated protein 22 [Source:UniProtKB/TrEMBL;Acc:D7TB70]
Sequence

CGCAGCTTCGCAGAGGGACGGAGAGCTTCAATGGCGGAGAAACCCCAGCCAGTTCGAGTA
CTCTACTGTCAGGTTTGCAGTTTACCAGCGGAGTACTGTGAATTTGGATCCGATTTCGAG
AAATGCAAGCCCTGGTTGATCCAAAACGCGCCTGATCTCTACCCCGATCTCCTTAAAGAG
GCTGATTCAAAGGAAGCTGATAAAGTTGCTCAGCAATTACAGTCGACTGCTCTTTCTTCT
GGTTCCGCCGATGGATCGGCTCCTTCTGGTGGTGCTTCAGCATCTAAGCAAGAAGAAGTA
AAACGTCTTCCTGGTGGGAAGATAAAAAGGAAAGAGAAGCAAGAAGTTGTTATTGAGAAG
ATTGTACGTAATAAGCGAAAATGTATCACCACTGTGAAGGGGCTGGAACTCTTTGGTATT
AAACTTAGTGATGCTTCAAAGAAGCTTGGGAAAAAGTTCGCTACAGGAGCATCTGTTGTC
AAGGGTCCAACTGAGAAGGAGCAAATTGATGTCCAAGGAGACATAGCCTATGACATTGTG
GAGTTTATTACAGAAACATGGCCTGATGTCCCCGAAACTGCAATTTTCTTCATTGAAGAT
GGGAGAAAGGTGGCAGCCGCCTGATTCTGGAATTTTGGCATGTCAAGAAAACGGAGCATG
CCGTGTTCCAGTTGGAGTGACTCACCAAACTTACTACGTTTTCAACATAATGGCTGCTTG
ACCACTCGCCAAGGTTTACCAGAATGGGATGCCCCCCAAGTGCCAATCCTTTTTCCCGTT
CTTCCACATCTTTCATTGCAAAAATGGTACTATCTTTTTGAAATGTATGCTTAGAAAAGT
AATGGACGTTGTCGTATAGAGGCAAGAGTGTGGTTTTTTCTGGTTTGTTTGCATGAACCA
AATCCAGAGCTGGTGAAGGAAATCCTCGAGGCTTTTTCCAAGTACATTGTGTATACCAGC
TGTGGCCACAGAATAATATTCTCTAGGATCCTTTTAGGAAAAGTCACTTGTACCAGAGTG
GAAAGTGACAACCACCACGGTGAGTTCTCTTTTTTCAAATTTAACCATACCATTTTCTTA
TTCTACAAGTTGGTATGCATTCA