Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g02110.t01
CDS Infomation

cds chromosome:12X:11:1702506:1704880:-1 gene:VIT_11s0016g02110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTAAAACTTATTCAATCCCAACATATTTCATTCTGATCAGCTTTCTAATCAATTTG
ATATCCAGCTTAACCTTAACATGGGCTGATGTCCTCCCCCACCAACTCCACACCCTCACT
ATCGCCACTCGGCTCAGGGTGGATCTAGATGCCACTGCAAAAGCCGCTAGGGACTTTGGC
AAACTTGTCCAACAAACCCCAGCTGCAGTGCTTTATCCTTCTTCCATAGAAGACATTGTG
TCTCTTGTGAAATTCTCCTATAATCAGCCCTCTCCCTTTACTATTGCAGCCAGAGGCCGA
GGCCATTCGCTCGGCGGACAAGCCATGGCTCCTAATGGGGTTGTGGTGGACATGACATCC
TTGAAGAACTCCGGCGCCGGAATTGGCATCAAGGTCACGAAGAATCCTGTGTCCGGTTCA
TATGCCGATGTTGGTGGTCATCAGCTATGGATCGATGTGCTGCAGGCCACGCTCGAGCAT
GGACTTGCACCCGTGTCGTGGACCGACTATTTGTACCTAACCGTTGGTGGGACTCTCTCC
AACGCTGGCGGCAGTGGCCAGACCTTCCGCCATGGCCCTCAGATCAGTAATGTCCATGAA
ATGGATATAATTACTGGTAAAGGGGAGCTTGTGACTTGCTCTAAAGAGACAAACTCTGAC
CTGTTTTATGCCGTTCTGGGAGGTCTCGGGCAGTTTGGGATTATAACAAGAGCGAGAATC
CCTCTAGAGCCAGCGCCTAAGAGAGTGAAGTGGGTGCGAATGCTTTATGATGATTTCTCC
ACATTTTCTGAAGACCAAGAGCATTTGATCTCAATCAATGGCCTGGACTATTTGGAGGGC
TCTCTCATCACCAAACAGAGTCCTCCAAATAACTGGAGATCGTCATTCTTCTCCAAATCC
CAATACCCAATAATATCTTCTCTACTGACCAAAAATGGCATCATCTACTCCATTGAAGTC
GTAAAGTATTACGATGATCTCACAAGCCATACAGTGGACGAGGAACTCCAAGAGCTTTTC
AAAGGCCTGAGGTTTCTTCCTGGTCTTGTTTTTACAAAAGATGTCACCCTAGTAGATTTT
CTAGACCGAGTTCACAACGGAGAGCTCCAGCTTCAGGCAAAAGGGCTGTGGGATGTCCCT
CATCCATGGCTGAACCTCTTCGTACCGAAATCTCGTATCTCAGACTTCAATTCAGGTGTT
TTCAGGGACATTATCCTCAAGACAAACCAGACCGTTGGACCCCTCCTCGTCTACCCAATG
ATCAGAAACAAGTGGGATAATGGGATGTCTGCAGCTATACCAGATGAAGATATATTCTAC
TCTATTGGGTTGTTGCATTCAAGTGGGGCTGATGATTGGGAGCCCTTGGAGAATCAAAAC
AAAGAAATCCTGAAGTTTTGTGACAAAGCTGGAATCAAGATCAAGCAATATCTTCCCCGT
TACACAACCAAGGCAGATTGGATGAATCATTTCGGTCCGAAATGGAAAATTTTCGAAGAC
AGGAAAGCTCAGTTTGATCCAAAAAATATATTATCCCCCGGACAGCGAATTTTCAATTCC
ATTTAA

Peptide Sequence

PEP ID

VIT_11s0016g02110.t01
PEP Infomation

pep chromosome:12X:11:1702506:1704880:-1 gene:VIT_11s0016g02110 transcript:VIT_11s0016g02110.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAKTYSIPTYFILISFLINLISSLTLTWADVLPHQLHTLTIATRLRVDLDATAKAARDFG
KLVQQTPAAVLYPSSIEDIVSLVKFSYNQPSPFTIAARGRGHSLGGQAMAPNGVVVDMTS
LKNSGAGIGIKVTKNPVSGSYADVGGHQLWIDVLQATLEHGLAPVSWTDYLYLTVGGTLS
NAGGSGQTFRHGPQISNVHEMDIITGKGELVTCSKETNSDLFYAVLGGLGQFGIITRARI
PLEPAPKRVKWVRMLYDDFSTFSEDQEHLISINGLDYLEGSLITKQSPPNNWRSSFFSKS
QYPIISSLLTKNGIIYSIEVVKYYDDLTSHTVDEELQELFKGLRFLPGLVFTKDVTLVDF
LDRVHNGELQLQAKGLWDVPHPWLNLFVPKSRISDFNSGVFRDIILKTNQTVGPLLVYPM
IRNKWDNGMSAAIPDEDIFYSIGLLHSSGADDWEPLENQNKEILKFCDKAGIKIKQYLPR
YTTKADWMNHFGPKWKIFEDRKAQFDPKNILSPGQRIFNSI

Transcript Sequence

Transcript ID

VIT_11s0016g02110.t01
Transcript Infomation

cdna chromosome:12X:11:1702506:1704880:-1 gene:VIT_11s0016g02110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTAAAACTTATTCAATCCCAACATATTTCATTCTGATCAGCTTTCTAATCAATTTG
ATATCCAGCTTAACCTTAACATGGGCTGATGTCCTCCCCCACCAACTCCACACCCTCACT
ATCGCCACTCGGCTCAGGGTGGATCTAGATGCCACTGCAAAAGCCGCTAGGGACTTTGGC
AAACTTGTCCAACAAACCCCAGCTGCAGTGCTTTATCCTTCTTCCATAGAAGACATTGTG
TCTCTTGTGAAATTCTCCTATAATCAGCCCTCTCCCTTTACTATTGCAGCCAGAGGCCGA
GGCCATTCGCTCGGCGGACAAGCCATGGCTCCTAATGGGGTTGTGGTGGACATGACATCC
TTGAAGAACTCCGGCGCCGGAATTGGCATCAAGGTCACGAAGAATCCTGTGTCCGGTTCA
TATGCCGATGTTGGTGGTCATCAGCTATGGATCGATGTGCTGCAGGCCACGCTCGAGCAT
GGACTTGCACCCGTGTCGTGGACCGACTATTTGTACCTAACCGTTGGTGGGACTCTCTCC
AACGCTGGCGGCAGTGGCCAGACCTTCCGCCATGGCCCTCAGATCAGTAATGTCCATGAA
ATGGATATAATTACTGGTAAAGGGGAGCTTGTGACTTGCTCTAAAGAGACAAACTCTGAC
CTGTTTTATGCCGTTCTGGGAGGTCTCGGGCAGTTTGGGATTATAACAAGAGCGAGAATC
CCTCTAGAGCCAGCGCCTAAGAGAGTGAAGTGGGTGCGAATGCTTTATGATGATTTCTCC
ACATTTTCTGAAGACCAAGAGCATTTGATCTCAATCAATGGCCTGGACTATTTGGAGGGC
TCTCTCATCACCAAACAGAGTCCTCCAAATAACTGGAGATCGTCATTCTTCTCCAAATCC
CAATACCCAATAATATCTTCTCTACTGACCAAAAATGGCATCATCTACTCCATTGAAGTC
GTAAAGTATTACGATGATCTCACAAGCCATACAGTGGACGAGGAACTCCAAGAGCTTTTC
AAAGGCCTGAGGTTTCTTCCTGGTCTTGTTTTTACAAAAGATGTCACCCTAGTAGATTTT
CTAGACCGAGTTCACAACGGAGAGCTCCAGCTTCAGGCAAAAGGGCTGTGGGATGTCCCT
CATCCATGGCTGAACCTCTTCGTACCGAAATCTCGTATCTCAGACTTCAATTCAGGTGTT
TTCAGGGACATTATCCTCAAGACAAACCAGACCGTTGGACCCCTCCTCGTCTACCCAATG
ATCAGAAACAAGTGGGATAATGGGATGTCTGCAGCTATACCAGATGAAGATATATTCTAC
TCTATTGGGTTGTTGCATTCAAGTGGGGCTGATGATTGGGAGCCCTTGGAGAATCAAAAC
AAAGAAATCCTGAAGTTTTGTGACAAAGCTGGAATCAAGATCAAGCAATATCTTCCCCGT
TACACAACCAAGGCAGATTGGATGAATCATTTCGGTCCGAAATGGAAAATTTTCGAAGAC
AGGAAAGCTCAGTTTGATCCAAAAAATATATTATCCCCCGGACAGCGAATTTTCAATTCC
ATTTAAGCTGTAGAACTGGACACTTAGCTTCAGGTTTTTGAATCTACATTAGCCATAAAA
AATATTTCCATGCATGAAAAATGCAGTATTAGTTGATTAGGTAGCGCATATGTTCTATAT
TCTATCTTACAGGTTGGCATGGATATTTATATATTTTTGAATAAATACATATCCGATTAG
ATGG