Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g01950.t01
CDS Infomation

cds chromosome:12X:11:1583546:1589897:-1 gene:VIT_11s0016g01950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGCCTCGCGTTGGGAATAAGTTTCGGCTGGGGAGGAAGATCGGTAGCGGCTCGTTC
GGGGAGATCTATCTCGGTACTAACATTCAGACGAACGAGGAGGTTGCAATTAAGCTTGAA
AATGTCAAGACAAAGCATCCACAGTTACTATATGAATCAAAGTTATACAGAATTCTACAG
GGAGGAACTGGAATTCCAAATGTGAGATGGTTTGGAGTAGAGGGAGAGTACAATGTTCTT
GTGATGGATTTGCTTGGGCCTAGTCTTGAAGATCTATTCAACTTTTGCAGTAGGAAACTC
TCTTTGAAGTCAGTGCTCATGCTTGCTGATCAAATGATCAATCGCGTTGAATTTGTTCAT
TCTAAATCGTTTCTACATCGAGATATCAAGCCAGACAATTTTCTAATGGGCTTGGGAAGA
CGTGCAAATCAGGTCTACATCATTGACTTTGGTTTGGCTAAGAAATATAGAGATACTGCA
ACACATCAGCACATTCCTTATAGAGAAAATAAGAATTTGACTGGAACTGCAAGATATGCA
AGTATGAACACCCACCTTGGCATTGAGCAAAGCCGGAGGGATGATTTAGAATCTCTTGGT
TATGTGCTTATGTACTTCCTAAGAGGAAGTCTTCCTTGGCAGGGACTGAAAGCAGGAACT
AAGAAACAAAAGTATGAGAAAATTAGTGAAAGAAAAGTTTCCACATCGATTGAGGTCCTT
TGTCGGGGTTATCCAACAGAATTTGCTTCATACTTCCACTACTGTCGTTCACTGCGATTT
GATGATAAGCCAGATTATGCTTATCTGAAAAGGATATTCCGTGACCTCTTTATTCGCGAA
GGATTCCAGTTTGACTATGTGTTTGACTGGACTATTTTGAAGTACCAGCAATCACAGCTT
GCTACTCCTCCATCTCGTGTTCTTGGTCCTGGTGCTGGAACAAGCTCTGGACTGCCCCCT
CCTGCTGTTGCCAATGCTGACAGGCAGTCAGGAGAAGAAGGGAGACCTGCTGGTTTATCT
TCTATGGACCCTTCTCGTCGGAGAATTTCTGGTGATGGAGGAGGTTTATCCAAGCAGAAG
AGTCCAGTTGCAAGCGATTTGGCAGTGAGTAAAGATGCTATGTTATCAAGCTCCCATTTT
TTGGGGCGGTCAAGTGGTTCATCAAGGCGAGCTGCTGTGTCTAGCAGCCGTGACGCAGCC
ATTATGGGAAGCGAGTCTGATCCCTCTCGTGCACATACCACTGAGGCAAGCCCAGGAGCA
GCAGTACGGAGGATCTCAAGTGGGCAAAGAAGTTCACCGGTTGGATCCTCAGACCCCAAG
CGCACATCATCTGGTAGGAACATCACTAACATAAAGAACTATGAATCCACAATCAGGGGC
ATTGAGAATCTGAATTTTGACAATGATGAGAGGGTTCATTATTAG

Peptide Sequence

PEP ID

VIT_11s0016g01950.t01
PEP Infomation

pep chromosome:12X:11:1583546:1589897:-1 gene:VIT_11s0016g01950 transcript:VIT_11s0016g01950.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQ
GGTGIPNVRWFGVEGEYNVLVMDLLGPSLEDLFNFCSRKLSLKSVLMLADQMINRVEFVH
SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTATHQHIPYRENKNLTGTARYA
SMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISERKVSTSIEVL
CRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQL
ATPPSRVLGPGAGTSSGLPPPAVANADRQSGEEGRPAGLSSMDPSRRRISGDGGGLSKQK
SPVASDLAVSKDAMLSSSHFLGRSSGSSRRAAVSSSRDAAIMGSESDPSRAHTTEASPGA
AVRRISSGQRSSPVGSSDPKRTSSGRNITNIKNYESTIRGIENLNFDNDERVHY

Transcript Sequence

Transcript ID

VIT_11s0016g01950.t01
Transcript Infomation

cdna chromosome:12X:11:1583546:1589897:-1 gene:VIT_11s0016g01950 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTGTCGTTGTTGTTGTTTCCATTCTATTTTCAATTGGATTTTGTTAAAATCTCAGTATC
TAGAGAGAGAGGGTTTCCAGAGAGAGATTCAGTTTTCTTCTCCTTCTTCAACCTAACTCT
AGCTTTTGATTTCCTCATTTTGATTTTTGATTTTTTGATTTTTTATTTTGATTTTATTTT
TGTTACCACTTGGTCTAGGGTTTGTGTTTTTGGTGAGGGTTAGGTATTGTTTTTTTTCTT
AATAAGTTGAATTTTCATTTTTTTTGGGTTGAATTAGGGTTTGAATTAGTGGGTTAGGGT
TTCATCTGTTGGGGTTTGTGTGGATGGAGCCTCGCGTTGGGAATAAGTTTCGGCTGGGGA
GGAAGATCGGTAGCGGCTCGTTCGGGGAGATCTATCTCGGTACTAACATTCAGACGAACG
AGGAGGTTGCAATTAAGCTTGAAAATGTCAAGACAAAGCATCCACAGTTACTATATGAAT
CAAAGTTATACAGAATTCTACAGGGAGGAACTGGAATTCCAAATGTGAGATGGTTTGGAG
TAGAGGGAGAGTACAATGTTCTTGTGATGGATTTGCTTGGGCCTAGTCTTGAAGATCTAT
TCAACTTTTGCAGTAGGAAACTCTCTTTGAAGTCAGTGCTCATGCTTGCTGATCAAATGA
TCAATCGCGTTGAATTTGTTCATTCTAAATCGTTTCTACATCGAGATATCAAGCCAGACA
ATTTTCTAATGGGCTTGGGAAGACGTGCAAATCAGGTCTACATCATTGACTTTGGTTTGG
CTAAGAAATATAGAGATACTGCAACACATCAGCACATTCCTTATAGAGAAAATAAGAATT
TGACTGGAACTGCAAGATATGCAAGTATGAACACCCACCTTGGCATTGAGCAAAGCCGGA
GGGATGATTTAGAATCTCTTGGTTATGTGCTTATGTACTTCCTAAGAGGAAGTCTTCCTT
GGCAGGGACTGAAAGCAGGAACTAAGAAACAAAAGTATGAGAAAATTAGTGAAAGAAAAG
TTTCCACATCGATTGAGGTCCTTTGTCGGGGTTATCCAACAGAATTTGCTTCATACTTCC
ACTACTGTCGTTCACTGCGATTTGATGATAAGCCAGATTATGCTTATCTGAAAAGGATAT
TCCGTGACCTCTTTATTCGCGAAGGATTCCAGTTTGACTATGTGTTTGACTGGACTATTT
TGAAGTACCAGCAATCACAGCTTGCTACTCCTCCATCTCGTGTTCTTGGTCCTGGTGCTG
GAACAAGCTCTGGACTGCCCCCTCCTGCTGTTGCCAATGCTGACAGGCAGTCAGGAGAAG
AAGGGAGACCTGCTGGTTTATCTTCTATGGACCCTTCTCGTCGGAGAATTTCTGGTGATG
GAGGAGGTTTATCCAAGCAGAAGAGTCCAGTTGCAAGCGATTTGGCAGTGAGTAAAGATG
CTATGTTATCAAGCTCCCATTTTTTGGGGCGGTCAAGTGGTTCATCAAGGCGAGCTGCTG
TGTCTAGCAGCCGTGACGCAGCCATTATGGGAAGCGAGTCTGATCCCTCTCGTGCACATA
CCACTGAGGCAAGCCCAGGAGCAGCAGTACGGAGGATCTCAAGTGGGCAAAGAAGTTCAC
CGGTTGGATCCTCAGACCCCAAGCGCACATCATCTGGTAGGAACATCACTAACATAAAGA
ACTATGAATCCACAATCAGGGGCATTGAGAATCTGAATTTTGACAATGATGAGAGGGTTC
ATTATTAGATGCACACCTCCCTCAACTCTTGTAAATCTGGACTCAGTGTGCTACTACGCT
TGCAGTAGAATTTGTTAGCTATTGGAGTGAGTTTTCAGGGGCAATTGTGAGCTGGTACCC
AACAGACTGGGTTGTGATTTGCAAAAGACGTATATCAAATTATCAAGAGAATGTAGAGAA
GGCTATGTCTATGGAGATTGAGTTGTGTTGGTACTGCTCGCCAGTCTAGTTTACTCATTT
CTTTTAACCCTTTTCCCTTCTCTGAAGTCTCTTGAGGTGTCTCATGTTATGGTTCTAAAC
TTAATGGCACTGTAAATTGGCCTGTTGTATTGATATTCTCCTCCCTATAAAAGTTCATTT
TTC