Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g01810.t01
CDS Infomation

cds chromosome:12X:11:1460164:1461907:-1 gene:VIT_11s0016g01810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAACTACTTTTCTGCTGGACGACTTCTCCCATTTTTATAGCTTCTTTCAAGATAGT
GGTAATAGCATCCCGGACGATAGTGCCGGAGGTGGTGGTAGTGGTGGTGGTGGGAGGAAG
AGGAGGAGGGGCGCCGGTGGGGGTTCTGGAGACGAGAGTGGGGCGTTGAAGGAGATTCTC
GCTTCGTTGCTGTTGTTGGATGAGGAGGAGAAGTTGGATCAGGAGAAGTGGGCTTTGGAT
AATCAGAACGAGAGGGCTCTGTTCGAGGAGAATCACAGGAAGAGGGCTCAGGCCATGAAT
GAGTATCGCGCGGATATGGTTGAGCGGTTTGGTGAAATGGAGGAGAGTGAGAGCTCGAGG
GTGAAGCGGGCGCGGCGGTCGGCCTCCACGGTGGCTGCTGGGGTTGCTGCTGCTGCTGCT
TCTTCCGACAATGTGGGCTCGGAGAGTTCGAGCCAGCCGGTGGGGCACCACCGGCGGTTG
TGGGTGAAGGACAGGTCCAAGGCCTGGTGGGAGTGGTGTAGCCACCCGGATTTCCCGGAG
GAGGACTTCCGCCGCGCGTTTCGGATGAGTCGAGCGACGTTTGATATGATTTGCGATGAG
CTCGACTCGGTTGTCACCAAGAAGGACACAATGCTTCGCCTGGCGATTCCGGTTCGCCAG
CGCGTGGCCGTCTGTATATGGAGGTTGGCCACCGGCGAGCCTCTCCGCCTTGTGTCCAAG
CGATTCGGATTGGGGATATCCACCTGCCACAAGCTCGTTCTCGAGGTCTGCGCCGCAATA
AAGACTGTTCTAATGCCCAAGTTTCTTCAATGGCCCGACGACGAGAAATCGAAGATAGTG
AAAGACGAATTCGAATCCATTTCAGGAATTCCCAATGTTGGAGGCTCAATGTACACTACC
CATATTCCAATTATCGCCCCTAAGGTCAGTGTTGCCGCTTATTTCAATAAGCGCCACACA
GAGAGAAACCAGAAGACTTCATACTCTGTTACAGTTCAAGGGGTTGTTGATCCTAAGGGG
GTTTTCACCGATGTTAGCATTGGTTGGCCTGGTTCAATGTCGGATGAAAAGGTTTTGGAG
CAGTCCTCTCTTTACCAACGCGCGAATAGCGGATTTTTGAAGGATGTTTGGGTTGTTGGT
GGTTCTGGATACCCTCTTCTGGATTGGGTCATGGTGCCTTACACCCACCAGAATCTCACT
TGGACCCAGCATGCATTCAATGAGAAAATTGGGGATATCCAGAACGTTGCCAAGGAGGCC
TTTGCGAGGTTGAAGAGGAGGTGGTCTTGCCTGCAGAAGAGAACCGAGGTGAAGCTTCTC
GACTTGCCCGTGGTTCTTGGGGCCTGTTGTGTATTGCACAACATCTGTCAGATGAGGAAT
GAGGAAATGGATCCAGCGCTGCAGTTTGAGCTTTTCGACGATGAGATGATTCCAGAGAAT
GGTTTGAGGTCCGCGAGCTCGGCCCAGGCCAGAGACCGCATTGCCCATGATCTATTGCAC
CATGGCCTTGCAGGGAATGCTTTTCTATAG

Peptide Sequence

PEP ID

VIT_11s0016g01810.t01
PEP Infomation

pep chromosome:12X:11:1460164:1461907:-1 gene:VIT_11s0016g01810 transcript:VIT_11s0016g01810.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

METTFLLDDFSHFYSFFQDSGNSIPDDSAGGGGSGGGGRKRRRGAGGGSGDESGALKEIL
ASLLLLDEEEKLDQEKWALDNQNERALFEENHRKRAQAMNEYRADMVERFGEMEESESSR
VKRARRSASTVAAGVAAAAASSDNVGSESSSQPVGHHRRLWVKDRSKAWWEWCSHPDFPE
EDFRRAFRMSRATFDMICDELDSVVTKKDTMLRLAIPVRQRVAVCIWRLATGEPLRLVSK
RFGLGISTCHKLVLEVCAAIKTVLMPKFLQWPDDEKSKIVKDEFESISGIPNVGGSMYTT
HIPIIAPKVSVAAYFNKRHTERNQKTSYSVTVQGVVDPKGVFTDVSIGWPGSMSDEKVLE
QSSLYQRANSGFLKDVWVVGGSGYPLLDWVMVPYTHQNLTWTQHAFNEKIGDIQNVAKEA
FARLKRRWSCLQKRTEVKLLDLPVVLGACCVLHNICQMRNEEMDPALQFELFDDEMIPEN
GLRSASSAQARDRIAHDLLHHGLAGNAFL

Transcript Sequence

Transcript ID

VIT_11s0016g01810.t01
Transcript Infomation

cdna chromosome:12X:11:1460164:1461907:-1 gene:VIT_11s0016g01810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATCAGTTCACACCGCTTTTCCTCATATATTTTCAATTTCAAGCCCATGGAAACTACTTTT
CTGCTGGACGACTTCTCCCATTTTTATAGCTTCTTTCAAGATAGTGGTAATAGCATCCCG
GACGATAGTGCCGGAGGTGGTGGTAGTGGTGGTGGTGGGAGGAAGAGGAGGAGGGGCGCC
GGTGGGGGTTCTGGAGACGAGAGTGGGGCGTTGAAGGAGATTCTCGCTTCGTTGCTGTTG
TTGGATGAGGAGGAGAAGTTGGATCAGGAGAAGTGGGCTTTGGATAATCAGAACGAGAGG
GCTCTGTTCGAGGAGAATCACAGGAAGAGGGCTCAGGCCATGAATGAGTATCGCGCGGAT
ATGGTTGAGCGGTTTGGTGAAATGGAGGAGAGTGAGAGCTCGAGGGTGAAGCGGGCGCGG
CGGTCGGCCTCCACGGTGGCTGCTGGGGTTGCTGCTGCTGCTGCTTCTTCCGACAATGTG
GGCTCGGAGAGTTCGAGCCAGCCGGTGGGGCACCACCGGCGGTTGTGGGTGAAGGACAGG
TCCAAGGCCTGGTGGGAGTGGTGTAGCCACCCGGATTTCCCGGAGGAGGACTTCCGCCGC
GCGTTTCGGATGAGTCGAGCGACGTTTGATATGATTTGCGATGAGCTCGACTCGGTTGTC
ACCAAGAAGGACACAATGCTTCGCCTGGCGATTCCGGTTCGCCAGCGCGTGGCCGTCTGT
ATATGGAGGTTGGCCACCGGCGAGCCTCTCCGCCTTGTGTCCAAGCGATTCGGATTGGGG
ATATCCACCTGCCACAAGCTCGTTCTCGAGGTCTGCGCCGCAATAAAGACTGTTCTAATG
CCCAAGTTTCTTCAATGGCCCGACGACGAGAAATCGAAGATAGTGAAAGACGAATTCGAA
TCCATTTCAGGAATTCCCAATGTTGGAGGCTCAATGTACACTACCCATATTCCAATTATC
GCCCCTAAGGTCAGTGTTGCCGCTTATTTCAATAAGCGCCACACAGAGAGAAACCAGAAG
ACTTCATACTCTGTTACAGTTCAAGGGGTTGTTGATCCTAAGGGGGTTTTCACCGATGTT
AGCATTGGTTGGCCTGGTTCAATGTCGGATGAAAAGGTTTTGGAGCAGTCCTCTCTTTAC
CAACGCGCGAATAGCGGATTTTTGAAGGATGTTTGGGTTGTTGGTGGTTCTGGATACCCT
CTTCTGGATTGGGTCATGGTGCCTTACACCCACCAGAATCTCACTTGGACCCAGCATGCA
TTCAATGAGAAAATTGGGGATATCCAGAACGTTGCCAAGGAGGCCTTTGCGAGGTTGAAG
AGGAGGTGGTCTTGCCTGCAGAAGAGAACCGAGGTGAAGCTTCTCGACTTGCCCGTGGTT
CTTGGGGCCTGTTGTGTATTGCACAACATCTGTCAGATGAGGAATGAGGAAATGGATCCA
GCGCTGCAGTTTGAGCTTTTCGACGATGAGATGATTCCAGAGAATGGTTTGAGGTCCGCG
AGCTCGGCCCAGGCCAGAGACCGCATTGCCCATGATCTATTGCACCATGGCCTTGCAGGG
AATGCTTTTCTATAGTTATTAATGTATTGTAGCTTTTATGCTCTGAGTTTCTCATTCTTT
TTGGCTACCAATATTAGAGATAGTCATGATGCAGAATAAAAAGCATATTTCATTTGTCCA
TGTATTGTTTTGGAAGATTCATTTTCCTCTCCTAACAGATAGATGAATAGTTTCCATTTC
CATT