Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g01770.t01
CDS Infomation

cds chromosome:12X:11:1417490:1424368:1 gene:VIT_11s0016g01770 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGGAGAGGGCCCTTAAACCCTAGCAATCTCAAGCTCACTCTCCCTCCTGATGAGGAT
TCATTGACTAAGTTCCTAACTCAGAGTGGGACTTTTATGGATGGTGATCTGCTGGTCAAC
AGGGATGGAGTTCGAATTGTGTCTAAGAGCGAAGCTGAAGTGCCACCACTTATAAAGCCC
TCTGACAACCAGTTGAGCTTGGCTGACATAGACACGATTAAAGTGATTGGGAAGGGCGCC
GGTGGAACTGTGCAATTGGTGCAACATAAGTGGACTGGTCAATTTTTTGCGTTGAAGGTT
ATTCAAATGAATATTCAGGAGGCTGCTCTCAAGCATATTGCACAGGAGCTAAAAATTAAC
CAGTCATCACAATGCCCATATGTTGTCGTGTGTTACAAGTCTTTCTATGATAATGGTGCC
TTTTCTATTATCTTAGAGTACATGGATGGTGGATCTCTTTTAGATTTTCTGAAAAAGGTC
AAATCAATTCCAGAGCCGTATCTTGCTGCCATCTGTAATCAGGTGCTCAAGGGTTTGTCG
TATCTTCATCATGAAAGACACATCATCCATAGGGACTTAAAACCTTCTAACTTGTTAATA
AATCACAGAGGAGAAGTGAAGATCACCGACTTTGGTGTGAGTGCAATACTTACAAGCACC
TCTGGGCAGGCAAATACTTTTGTCGGCACGTACAACTATATGTCTCCAGAGAGAATTAGT
GGAGGTAAGTATGGCTCCAAAAGTGACATTTGGAGCTTGGGGTTGGTTTTGCTCGAGTGT
GCCACTGGTCAGTTCCCGTATTCTCCACCAGAGCAAGGGGAAGGATGGACCAGCTTTTAT
GAACTTATGGAAGCCATTGTTGACCAGCCACCGCCTTGTGCATCTACTAATCAATTTTCT
GCAGAATTCTGCTCTTTCATTTCTGCATGCATACAGAAAGACCCAAATGACAGAAAGTCA
GCGCATGAACTTATGGCACATCCTTTTATCAGCATGTACAGAGACTTGAATGTTGATCTT
GCAACATACTTCACCAATGCAGGATCTCCACTCGCTACATTTTAA

Peptide Sequence

PEP ID

VIT_11s0016g01770.t01
PEP Infomation

pep chromosome:12X:11:1417490:1424368:1 gene:VIT_11s0016g01770 transcript:VIT_11s0016g01770.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRRGPLNPSNLKLTLPPDEDSLTKFLTQSGTFMDGDLLVNRDGVRIVSKSEAEVPPLIKP
SDNQLSLADIDTIKVIGKGAGGTVQLVQHKWTGQFFALKVIQMNIQEAALKHIAQELKIN
QSSQCPYVVVCYKSFYDNGAFSIILEYMDGGSLLDFLKKVKSIPEPYLAAICNQVLKGLS
YLHHERHIIHRDLKPSNLLINHRGEVKITDFGVSAILTSTSGQANTFVGTYNYMSPERIS
GGKYGSKSDIWSLGLVLLECATGQFPYSPPEQGEGWTSFYELMEAIVDQPPPCASTNQFS
AEFCSFISACIQKDPNDRKSAHELMAHPFISMYRDLNVDLATYFTNAGSPLATF

Transcript Sequence

Transcript ID

VIT_11s0016g01770.t01
Transcript Infomation

cdna chromosome:12X:11:1417490:1424368:1 gene:VIT_11s0016g01770 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AACGACGAGGCATGGGTCTTCTTCCTCCTCATTTCTGAAACGCTGACTGGTCTTCTCTTT
CACCCACCAAACTTCTTGTATTGGTATTTATAAATTGCAATGCATTAATGTCATAAATCT
GAATGTAAATTTATCCAAACCCTAGAGAGGATTGCTTGGTTTCTCAAGACTTTGGAGTTT
GGAATCATGAGGAGAGGGCCCTTAAACCCTAGCAATCTCAAGCTCACTCTCCCTCCTGAT
GAGGATTCATTGACTAAGTTCCTAACTCAGAGTGGGACTTTTATGGATGGTGATCTGCTG
GTCAACAGGGATGGAGTTCGAATTGTGTCTAAGAGCGAAGCTGAAGTGCCACCACTTATA
AAGCCCTCTGACAACCAGTTGAGCTTGGCTGACATAGACACGATTAAAGTGATTGGGAAG
GGCGCCGGTGGAACTGTGCAATTGGTGCAACATAAGTGGACTGGTCAATTTTTTGCGTTG
AAGGTTATTCAAATGAATATTCAGGAGGCTGCTCTCAAGCATATTGCACAGGAGCTAAAA
ATTAACCAGTCATCACAATGCCCATATGTTGTCGTGTGTTACAAGTCTTTCTATGATAAT
GGTGCCTTTTCTATTATCTTAGAGTACATGGATGGTGGATCTCTTTTAGATTTTCTGAAA
AAGGTCAAATCAATTCCAGAGCCGTATCTTGCTGCCATCTGTAATCAGGTGCTCAAGGGT
TTGTCGTATCTTCATCATGAAAGACACATCATCCATAGGGACTTAAAACCTTCTAACTTG
TTAATAAATCACAGAGGAGAAGTGAAGATCACCGACTTTGGTGTGAGTGCAATACTTACA
AGCACCTCTGGGCAGGCAAATACTTTTGTCGGCACGTACAACTATATGTCTCCAGAGAGA
ATTAGTGGAGGTAAGTATGGCTCCAAAAGTGACATTTGGAGCTTGGGGTTGGTTTTGCTC
GAGTGTGCCACTGGTCAGTTCCCGTATTCTCCACCAGAGCAAGGGGAAGGATGGACCAGC
TTTTATGAACTTATGGAAGCCATTGTTGACCAGCCACCGCCTTGTGCATCTACTAATCAA
TTTTCTGCAGAATTCTGCTCTTTCATTTCTGCATGCATACAGAAAGACCCAAATGACAGA
AAGTCAGCGCATGAACTTATGGCACATCCTTTTATCAGCATGTACAGAGACTTGAATGTT
GATCTTGCAACATACTTCACCAATGCAGGATCTCCACTCGCTACATTTTAAAAGTTTGTC
TGAGTTCTTATTTACCAAAAAATAGCATGATCCTAGGAGAAGTGAGGAAATCAGCTATCG
GTGTGTCCAGATACCTGGTGAAGGATTCTTAGCGACAATTCTCAAGCCCCTCTCTATGGC
AACAACGGCAAGGGGTCTTCAATCATTTGTGACGAACCTCATTGCTTGAAAAATATTGAG
TGTGAGAAACATATGAAGAAATTGATGATTTATGACTGCAAGGCAATTAGGCAAATTACT
ACTGTTTGTATTCTGCCGAAGGCACTTTGGCATGATTTTGAATTGCTCGTTTAGAGGTGC
AACACACATCACATTCCCACGAAGAATTTTCCATGTATGTGTAAGATTGTGATAAATACT
CAGTTTGAACCCTAATCTCTTTAATTATGAGTGATCTGGATGTTGG