Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g01720.t01
CDS Infomation

cds chromosome:12X:11:1378874:1380601:1 gene:VIT_11s0016g01720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGTCCTCGCCGTTTTTCCACTCATCTCTCACGCCGAAACCCAGGCCCTCGGTAATA
AGGCCTGGAGGCAACGGTCGCTATTTGCCCATAATTAAATGCACCTCATCCACTTTCGAT
CCTTCCACGCCCGCGGCGAAACATCGGCGGCCGGCGGTGGAGAACATCCGCGAAGAAGCG
CGGCGGATTCGGTCAGCAGATGCGGCGGCGGCGGGGCAGCAGTTCTCGGCCAAATACGTG
CCGTTCAACGCCGGGCCGGACTCTTCGGAGTCGTACTCGCTGGACGAGGTGGTGTACCGG
TCACGCTCCGGCGGGCTTCTGGACGTGGAGCACGACATGCAGGCGCTGAAGAGGTTCGAC
GGCGAGTACTGGCGGGCGCTGTTCGACTCGCGCGTGGGGAAGACGACGTGGCCGTACGGC
TCCGGCGTGTGGTCGAAGAAGGAGTGGGTGTTGCCGGAGATCGACAGCGACGATATCGTC
AGCGCCTTCGAAGGCAATTCCAACCTCTTCTGGGCTGAGCGTTTCGGCAAACAGTTTCTG
GGCATGAACGATTTGTGGGTAAAGCACTGCGGCATTAGCCACACGGGCAGCTTCAAGGAC
CTGGGCATGACGGTTCTAGTCAGCCAAGTGAACCGCCTCCGCAAAATGAATAGCCCCGTC
GTCGGTGTCGGCTGCGCTTCCACCGGAGACACCTCCGCCGCGCTCTCCGCCTACTGCGCC
TCCGCAGGCATCCCCTCAATAGTCTTCCTCCCCGCAAACCGAATTTCAATTGCCCAGCTC
GTCCAGCCCATTGCCAATGGCGCCTTTGTGTTGAGTATAGACACTGATTTTGATGGGTGC
ATGAAGCTGATTCGTGAAGTGACTTCTGAACTACCCATATATTTAGCCAATTCTTTGAAT
AGTTTGAGGCTGGAGGGCCAGAAAACAGCAGCAATCGAGATTCTGCAGCAGTTCGATTGG
GAAGTACCGGATTGGGTTATAGTTCCAGGAGGTAATCTCGGAAACATATACGCTTTCTAC
AAAGGATTCAAAATGTGCCATGAGTTGGGGCTTGTTGATCGGATTCCAAGGCTTGTGTGT
GCTCAAGCTGCAAATGCCAATCCTCTCTATCAGTATTACAAGTCAGGGTGGACTGAGTTC
AAGCCAGTGAAGGCCAATTCGACTTTCGCCTCTGCTATCCAGATTGGAGACCCGGTTTCC
ATCGATAGAGCTGAGTTTGCTCTCAAGAATTCAAATGGTATCGTCGAGGAAGCAACTGAG
GAAGAGTTGATGGATGCCATGGCAAATGCAGATTCCACTGGCATGTTCATTTGTCCTCAC
ACCGGCGTGGCGCTGGCTGCATTGATTAAGCTGAGGAACAGCGGGGTAATAGGACCCACC
GACCGGACGGTGGTGGTAAGCACGGCACATGGGCTGAAGTTTACGCAATCCAAGGTTGAC
TATCACTCGAAAAAGATCCCGGATTTGGCCTGCAGATTCGCCAACCCGCCAGTGGAAGTG
AAGGCAGATTTCGGGGCAGTAATAGATGTTCTGAAGAAGCATTTGTCGAGTAAAACTCGG
AAGCATTAG

Peptide Sequence

PEP ID

VIT_11s0016g01720.t01
PEP Infomation

pep chromosome:12X:11:1378874:1380601:1 gene:VIT_11s0016g01720 transcript:VIT_11s0016g01720.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASSPFFHSSLTPKPRPSVIRPGGNGRYLPIIKCTSSTFDPSTPAAKHRRPAVENIREEA
RRIRSADAAAAGQQFSAKYVPFNAGPDSSESYSLDEVVYRSRSGGLLDVEHDMQALKRFD
GEYWRALFDSRVGKTTWPYGSGVWSKKEWVLPEIDSDDIVSAFEGNSNLFWAERFGKQFL
GMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNSPVVGVGCASTGDTSAALSAYCA
SAGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCMKLIREVTSELPIYLANSLN
SLRLEGQKTAAIEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCHELGLVDRIPRLVC
AQAANANPLYQYYKSGWTEFKPVKANSTFASAIQIGDPVSIDRAEFALKNSNGIVEEATE
EELMDAMANADSTGMFICPHTGVALAALIKLRNSGVIGPTDRTVVVSTAHGLKFTQSKVD
YHSKKIPDLACRFANPPVEVKADFGAVIDVLKKHLSSKTRKH

Transcript Sequence

Transcript ID

VIT_11s0016g01720.t01
Transcript Infomation

cdna chromosome:12X:11:1378874:1380601:1 gene:VIT_11s0016g01720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGTCCTCGCCGTTTTTCCACTCATCTCTCACGCCGAAACCCAGGCCCTCGGTAATA
AGGCCTGGAGGCAACGGTCGCTATTTGCCCATAATTAAATGCACCTCATCCACTTTCGAT
CCTTCCACGCCCGCGGCGAAACATCGGCGGCCGGCGGTGGAGAACATCCGCGAAGAAGCG
CGGCGGATTCGGTCAGCAGATGCGGCGGCGGCGGGGCAGCAGTTCTCGGCCAAATACGTG
CCGTTCAACGCCGGGCCGGACTCTTCGGAGTCGTACTCGCTGGACGAGGTGGTGTACCGG
TCACGCTCCGGCGGGCTTCTGGACGTGGAGCACGACATGCAGGCGCTGAAGAGGTTCGAC
GGCGAGTACTGGCGGGCGCTGTTCGACTCGCGCGTGGGGAAGACGACGTGGCCGTACGGC
TCCGGCGTGTGGTCGAAGAAGGAGTGGGTGTTGCCGGAGATCGACAGCGACGATATCGTC
AGCGCCTTCGAAGGCAATTCCAACCTCTTCTGGGCTGAGCGTTTCGGCAAACAGTTTCTG
GGCATGAACGATTTGTGGGTAAAGCACTGCGGCATTAGCCACACGGGCAGCTTCAAGGAC
CTGGGCATGACGGTTCTAGTCAGCCAAGTGAACCGCCTCCGCAAAATGAATAGCCCCGTC
GTCGGTGTCGGCTGCGCTTCCACCGGAGACACCTCCGCCGCGCTCTCCGCCTACTGCGCC
TCCGCAGGCATCCCCTCAATAGTCTTCCTCCCCGCAAACCGAATTTCAATTGCCCAGCTC
GTCCAGCCCATTGCCAATGGCGCCTTTGTGTTGAGTATAGACACTGATTTTGATGGGTGC
ATGAAGCTGATTCGTGAAGTGACTTCTGAACTACCCATATATTTAGCCAATTCTTTGAAT
AGTTTGAGGCTGGAGGGCCAGAAAACAGCAGCAATCGAGATTCTGCAGCAGTTCGATTGG
GAAGTACCGGATTGGGTTATAGTTCCAGGAGGTAATCTCGGAAACATATACGCTTTCTAC
AAAGGATTCAAAATGTGCCATGAGTTGGGGCTTGTTGATCGGATTCCAAGGCTTGTGTGT
GCTCAAGCTGCAAATGCCAATCCTCTCTATCAGTATTACAAGTCAGGGTGGACTGAGTTC
AAGCCAGTGAAGGCCAATTCGACTTTCGCCTCTGCTATCCAGATTGGAGACCCGGTTTCC
ATCGATAGAGCTGAGTTTGCTCTCAAGAATTCAAATGGTATCGTCGAGGAAGCAACTGAG
GAAGAGTTGATGGATGCCATGGCAAATGCAGATTCCACTGGCATGTTCATTTGTCCTCAC
ACCGGCGTGGCGCTGGCTGCATTGATTAAGCTGAGGAACAGCGGGGTAATAGGACCCACC
GACCGGACGGTGGTGGTAAGCACGGCACATGGGCTGAAGTTTACGCAATCCAAGGTTGAC
TATCACTCGAAAAAGATCCCGGATTTGGCCTGCAGATTCGCCAACCCGCCAGTGGAAGTG
AAGGCAGATTTCGGGGCAGTAATAGATGTTCTGAAGAAGCATTTGTCGAGTAAAACTCGG
AAGCATTAGGCGAGAATGGCCGGGCTAGGAATTATATTTGTATGTTGTGTTATGGATTCC
ACGTTTTGATAATTGATATGTATTTTCCTCTTTGCAGAATAGAAACACTTGTGTAGAAAC
TGGCTGTAATATGCGTTCAAAATTTTGTGATGACAATAAATTTTCTTT