Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g01460.t01
CDS Infomation

cds chromosome:12X:11:1158864:1163496:-1 gene:VIT_11s0016g01460 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTGACGTGCATAACTCGTTCGAAGCAACTCAGCGACGAGTCGTTGAAACAGACGGAG
GAGGCAAACGCCTCGAACACGCCTGGGACCAAGCAGCAGTCGATCAAAGCTCTCACATGT
CAGATCAAGGACATGGCGTTGAAAGCGACAGGAGCGTATCGGAACTGTAATCCGTGTTCC
GCTTCAGTGCAGCATCAGAGCAGGAGTTACGCAGAGTCGGACTCGGCTTCGGCGTCGGAG
AGGTTCAGATGGTCGTACCGTCGGACGGGGAGTTCGAGCTCGACGACGCCACGTTGGGGG
AAGGAGATGGAGGCGAGACTGAAGGGGCTTTCGAGCGGCGAAGGCACGCCGGCATCGGCG
AGTGGCCGGCGAGTCGAATCGGTCGTATTCGTTGAGGAGAATGAGCCGAAAGAGTGGGTG
GCCCAGGTCGAGCCCGGCGTGCTCATCACCTTCGTCTCCCTTCCCCGTGGAGGGAACGAT
CTCAAGCGCATTCGGTTCAGTCGAGAAATGTTTAACAAATGGCAAGCTCAAAGGTGGTGG
GCAGAGAATTATGATAGGGTCATGGAACTCTACAATGTTCAAAGGTTTAACCGCCAAGCC
TTCCCTCTTCCAACACCTCCAAGATCTGAAGATGAGAGCTCAAAAATGGAATCAGCAGAA
GACAGCCCTGTTACGCCTCCATTGACCAAAGAACGCCTGCCTCGTAACCTGTATCGTCCC
TCAGGACTGGGAATGGGCTACTCATCCTCGGATTCACTTGACCATCACCCAATGCAGCCG
CGTCATTTCTATGACTCAGGTGGTCTCACTTCAACCCCAAAACTCTCCAGCATAAGTGGG
GCAAAGACAGAAACATCATCCATGGATGCCTCTATAAGGACTAGTTCATCTAGGGAAGCT
GATCGCTCTGGAGAACTATCTGTTAGCAATGCCAGCGACTTGGAGACTGAATGGGTTGAA
GAGGATGAGCCAGGTGTTTACATTACCATCAGAGCGCTTCCAGGTGGTACACGGGAGCTT
AGACGTGTCAGATTCAGCCGAGAACGGTTTGGAGAGATGCATGCTAGACTTTGGTGGGAG
GAGAACCGGGCAAGAATACATGAACAGTACTTGTGA

Peptide Sequence

PEP ID

VIT_11s0016g01460.t01
PEP Infomation

pep chromosome:12X:11:1158864:1163496:-1 gene:VIT_11s0016g01460 transcript:VIT_11s0016g01460.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLTCITRSKQLSDESLKQTEEANASNTPGTKQQSIKALTCQIKDMALKATGAYRNCNPCS
ASVQHQSRSYAESDSASASERFRWSYRRTGSSSSTTPRWGKEMEARLKGLSSGEGTPASA
SGRRVESVVFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWW
AENYDRVMELYNVQRFNRQAFPLPTPPRSEDESSKMESAEDSPVTPPLTKERLPRNLYRP
SGLGMGYSSSDSLDHHPMQPRHFYDSGGLTSTPKLSSISGAKTETSSMDASIRTSSSREA
DRSGELSVSNASDLETEWVEEDEPGVYITIRALPGGTRELRRVRFSRERFGEMHARLWWE
ENRARIHEQYL

Transcript Sequence

Transcript ID

VIT_11s0016g01460.t01
Transcript Infomation

cdna chromosome:12X:11:1158864:1163496:-1 gene:VIT_11s0016g01460 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CATTAAAGTCCTGAGCACGAGCAATAGTGCCTCGTTATCTACGCTTCCAAACGGAAGCTA
CTCATCATCCAGCAACTTTCTTACTCTTGCTTTTCTTATTATTATTGTTATTTTTTAATT
TTCATTTTCCATGCTTCGAATTCTCGGTTGTTTCTGATTTTCCGGGCGTTTTTCCCTCCA
ACCAAACGCACCCCCAAGTTATAATTCGGTTTTGGGAGAGAAGTGAGAATGCTGACGTGC
ATAACTCGTTCGAAGCAACTCAGCGACGAGTCGTTGAAACAGACGGAGGAGGCAAACGCC
TCGAACACGCCTGGGACCAAGCAGCAGTCGATCAAAGCTCTCACATGTCAGATCAAGGAC
ATGGCGTTGAAAGCGACAGGAGCGTATCGGAACTGTAATCCGTGTTCCGCTTCAGTGCAG
CATCAGAGCAGGAGTTACGCAGAGTCGGACTCGGCTTCGGCGTCGGAGAGGTTCAGATGG
TCGTACCGTCGGACGGGGAGTTCGAGCTCGACGACGCCACGTTGGGGGAAGGAGATGGAG
GCGAGACTGAAGGGGCTTTCGAGCGGCGAAGGCACGCCGGCATCGGCGAGTGGCCGGCGA
GTCGAATCGGTCGTATTCGTTGAGGAGAATGAGCCGAAAGAGTGGGTGGCCCAGGTCGAG
CCCGGCGTGCTCATCACCTTCGTCTCCCTTCCCCGTGGAGGGAACGATCTCAAGCGCATT
CGGTTCAGTCGAGAAATGTTTAACAAATGGCAAGCTCAAAGGTGGTGGGCAGAGAATTAT
GATAGGGTCATGGAACTCTACAATGTTCAAAGGTTTAACCGCCAAGCCTTCCCTCTTCCA
ACACCTCCAAGATCTGAAGATGAGAGCTCAAAAATGGAATCAGCAGAAGACAGCCCTGTT
ACGCCTCCATTGACCAAAGAACGCCTGCCTCGTAACCTGTATCGTCCCTCAGGACTGGGA
ATGGGCTACTCATCCTCGGATTCACTTGACCATCACCCAATGCAGCCGCGTCATTTCTAT
GACTCAGGTGGTCTCACTTCAACCCCAAAACTCTCCAGCATAAGTGGGGCAAAGACAGAA
ACATCATCCATGGATGCCTCTATAAGGACTAGTTCATCTAGGGAAGCTGATCGCTCTGGA
GAACTATCTGTTAGCAATGCCAGCGACTTGGAGACTGAATGGGTTGAAGAGGATGAGCCA
GGTGTTTACATTACCATCAGAGCGCTTCCAGGTGGTACACGGGAGCTTAGACGTGTCAGA
TTCAGCCGAGAACGGTTTGGAGAGATGCATGCTAGACTTTGGTGGGAGGAGAACCGGGCA
AGAATACATGAACAGTACTTGTGAAGGAGCTAACCAGGGATCATCACAGGTACTGTTCCT
TTTTTTGCTGATTGTGAAGATGGTGCCTTCGTCGAGTGTCTCGTATTTGTCCTACAGTCG
AGGTCGAGGTCGAGGTCGAGCGTCCTCTATAGGTATCTGGCAAAATGCAGAAGCCAAGCA
GCCACAGAGAGCCCATGCTAGCCCTCACATACTCATGGGGGCAAAGGTGCAGGGCTTCTT
TGAGTGAGTTGCACTACTCTCTTCCAACATAGTGATTTTGCTTCAAAGCATCATCATCCT
TGTGAGTTGTGAATCCTTTCTATTTCTTTTTTTAATAACTCAATTTTTTATTTTATGTAT
TGGTGGTTGAAAAGAGGATGAGTCTTTTGTA