Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_11s0016g01390.t01
CDS Infomation	cds chromosome:12X:11:1112630:1115105:1 gene:VIT_11s0016g01390 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication protein A subunit [Source:UniProtKB/TrEMBL;Acc:D7TCH6]
Sequence	ATGCCGGTGAATCTGACGCCGAACGCGATTGCGGCAATCAACGGTGGAGATGTGAATTCA AAGCCGCTCGTGCAGGTTCTGGACATCAAGCTCATTGGAAACTCGCAGGAGCGGTACCGA TTTCTGCTTTCCGATGCCGTGGCGACTCAGCAGGCCATGCTGGCGACTCAACTCAATGAC CGAGTCAAGAGCGGACAAGTTCGCAAAGGATCTGTAATTCAGTTGATTGATTATATCTGC AGCGTTGTTCAAAATCGCAAGATTATTGTTGTGTTGAACATGGAAACTATAATACCAGAA TGTGAAATAATTGGAAACCCGAAAATGAATACTGAATCTCATTCAACAGCTCAGAAAGAG TTTCCCGGTGGCAATCGTGCAAGATCAGTGGGTGTTACTAATAATAATTTGAGTGTCCAA AATGGTGGTAATAAGATGCCGAGTTTTCGACCTTCTGTTCAACCTCCTTTCCAACCGCCT CCAAATTACAAAAGTCATGGCACAATTTTGAAGAATGAGGCACCAGCACGGATAATTCCG ATTGCTGCTTTGAATCCTTATCAGGGGCGGTGGGCTATCAAGGCAAGGGTAACTGCTAAA GGTGATCTGCGGAGATACAACAATGCCAGGGGAGATGGGAAGGTTTTCTCATTTGACCTC CTTGATTCTGATGGAGGGGAGATTCGAGTGACCTGCTTTAATGCAGTTGTTGATCGGTTT TATGATACTATTGAGGTTGGGAAAGTTTACTTGATATCGAAGGGTAGCTTAAAACCTGCA CAGAAGAACTTCAACCACCTGAAGAATGAATGGGAAATATTTTTGGAAGCAAGCTCAAGT GTGGAGCTGTGCCCAGATGAAGATGGCTCAATTCCAAAACAGCAGTTCTCCTTTAGACCA ATCAGTGAAATTGAGAATGTTGAAAACAATTCCATACTTGATGTTATTGGCATTGTAATA TCAGTGAATCCTTCAGTCCCCATCTTGAGAAAGAATGGTATGGAAACTCAGCGAAGAATT GTAAATCTAAAGGATGGCTCTGGTCGGAGTATTGAGCTCACCATGTGGGGGGAATTCTGC AACAGGGAAGGTCATCAGCTGCAGGAGATGATTGATTCTGGATCTTTCCCAGTTTTGGCT GTGAAATCCGGAAAGGTTAACGACTTCAGTGGGAAATCTGTAGGCACAATCTCTGCCACA CAGCTCTTCATAAATCCAGACTTTACAGAGGCTTGTAACTTGAGAGAGTGGTTTGATCGA GGGGGAAAGAATGCTGCTTCTCAGTCCATCTCTAGAGATATCATGCCTGCAGGATCTAGG AATGAGATACGTAAAACTGTGTCTCAGATCAAGGATGAAGGTCTTGGAAGATCAGATAAA CCAGACTGGGTCACAGTGAAGGCAACCATATCATTCATTAAAACAGACACTTTCTGTTAT GCGGCTTGCCCATTGATGATTGGAGATAGACAGTGTAATAAGAAAGTGACAAGGTCAGGG AACACAAGATGGCAATGTGACAGGTGCAATCAAGAATTCGAGGACTGTGATTATCGATAT CTTCTTCAAGCTCAAGTACAAGACCATACAGGATTGACTTGGGTGACAGCTTTCCAGGAA GCCGGTGAAGAGATCTTGGGTTGCTCAGCAAAAGAGCTGTACTTGTTGAAATACGAGGAG GAGGATGATTTCCGGTTTGGAGAAATAATCCGGAGCAGACTCCTTAACCAATTTTTGTTC AGACTTAAGATCAAAGAGGAAATGTATGGTGAAGAACAGAGGGTGAAGATCACTGTTGTC AAAGCAGACAAGGTGAACTATACTTCTGAAAGTAGGCATCTGCTTGATCTGATCTCAAAG TGCCCTTAA

Peptide Sequence

PEP ID	VIT_11s0016g01390.t01
PEP Infomation	pep chromosome:12X:11:1112630:1115105:1 gene:VIT_11s0016g01390 transcript:VIT_11s0016g01390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication protein A subunit [Source:UniProtKB/TrEMBL;Acc:D7TCH6]
Sequence	MPVNLTPNAIAAINGGDVNSKPLVQVLDIKLIGNSQERYRFLLSDAVATQQAMLATQLND RVKSGQVRKGSVIQLIDYICSVVQNRKIIVVLNMETIIPECEIIGNPKMNTESHSTAQKE FPGGNRARSVGVTNNNLSVQNGGNKMPSFRPSVQPPFQPPPNYKSHGTILKNEAPARIIP IAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRF YDTIEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLEASSSVELCPDEDGSIPKQQFSFRP ISEIENVENNSILDVIGIVISVNPSVPILRKNGMETQRRIVNLKDGSGRSIELTMWGEFC NREGHQLQEMIDSGSFPVLAVKSGKVNDFSGKSVGTISATQLFINPDFTEACNLREWFDR GGKNAASQSISRDIMPAGSRNEIRKTVSQIKDEGLGRSDKPDWVTVKATISFIKTDTFCY AACPLMIGDRQCNKKVTRSGNTRWQCDRCNQEFEDCDYRYLLQAQVQDHTGLTWVTAFQE AGEEILGCSAKELYLLKYEEEDDFRFGEIIRSRLLNQFLFRLKIKEEMYGEEQRVKITVV KADKVNYTSESRHLLDLISKCP

Transcript Sequence

Transcript ID	VIT_11s0016g01390.t01
Transcript Infomation	cdna chromosome:12X:11:1112630:1115105:1 gene:VIT_11s0016g01390 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication protein A subunit [Source:UniProtKB/TrEMBL;Acc:D7TCH6]
Sequence	ACGATGCCGGTGAATCTGACGCCGAACGCGATTGCGGCAATCAACGGTGGAGATGTGAAT TCAAAGCCGCTCGTGCAGGTTCTGGACATCAAGCTCATTGGAAACTCGCAGGAGCGGTAC CGATTTCTGCTTTCCGATGCCGTGGCGACTCAGCAGGCCATGCTGGCGACTCAACTCAAT GACCGAGTCAAGAGCGGACAAGTTCGCAAAGGATCTGTAATTCAGTTGATTGATTATATC TGCAGCGTTGTTCAAAATCGCAAGATTATTGTTGTGTTGAACATGGAAACTATAATACCA GAATGTGAAATAATTGGAAACCCGAAAATGAATACTGAATCTCATTCAACAGCTCAGAAA GAGTTTCCCGGTGGCAATCGTGCAAGATCAGTGGGTGTTACTAATAATAATTTGAGTGTC CAAAATGGTGGTAATAAGATGCCGAGTTTTCGACCTTCTGTTCAACCTCCTTTCCAACCG CCTCCAAATTACAAAAGTCATGGCACAATTTTGAAGAATGAGGCACCAGCACGGATAATT CCGATTGCTGCTTTGAATCCTTATCAGGGGCGGTGGGCTATCAAGGCAAGGGTAACTGCT AAAGGTGATCTGCGGAGATACAACAATGCCAGGGGAGATGGGAAGGTTTTCTCATTTGAC CTCCTTGATTCTGATGGAGGGGAGATTCGAGTGACCTGCTTTAATGCAGTTGTTGATCGG TTTTATGATACTATTGAGGTTGGGAAAGTTTACTTGATATCGAAGGGTAGCTTAAAACCT GCACAGAAGAACTTCAACCACCTGAAGAATGAATGGGAAATATTTTTGGAAGCAAGCTCA AGTGTGGAGCTGTGCCCAGATGAAGATGGCTCAATTCCAAAACAGCAGTTCTCCTTTAGA CCAATCAGTGAAATTGAGAATGTTGAAAACAATTCCATACTTGATGTTATTGGCATTGTA ATATCAGTGAATCCTTCAGTCCCCATCTTGAGAAAGAATGGTATGGAAACTCAGCGAAGA ATTGTAAATCTAAAGGATGGCTCTGGTCGGAGTATTGAGCTCACCATGTGGGGGGAATTC TGCAACAGGGAAGGTCATCAGCTGCAGGAGATGATTGATTCTGGATCTTTCCCAGTTTTG GCTGTGAAATCCGGAAAGGTTAACGACTTCAGTGGGAAATCTGTAGGCACAATCTCTGCC ACACAGCTCTTCATAAATCCAGACTTTACAGAGGCTTGTAACTTGAGAGAGTGGTTTGAT CGAGGGGGAAAGAATGCTGCTTCTCAGTCCATCTCTAGAGATATCATGCCTGCAGGATCT AGGAATGAGATACGTAAAACTGTGTCTCAGATCAAGGATGAAGGTCTTGGAAGATCAGAT AAACCAGACTGGGTCACAGTGAAGGCAACCATATCATTCATTAAAACAGACACTTTCTGT TATGCGGCTTGCCCATTGATGATTGGAGATAGACAGTGTAATAAGAAAGTGACAAGGTCA GGGAACACAAGATGGCAATGTGACAGGTGCAATCAAGAATTCGAGGACTGTGATTATCGA TATCTTCTTCAAGCTCAAGTACAAGACCATACAGGATTGACTTGGGTGACAGCTTTCCAG GAAGCCGGTGAAGAGATCTTGGGTTGCTCAGCAAAAGAGCTGTACTTGTTGAAATACGAG GAGGAGGATGATTTCCGGTTTGGAGAAATAATCCGGAGCAGACTCCTTAACCAATTTTTG TTCAGACTTAAGATCAAAGAGGAAATGTATGGTGAAGAACAGAGGGTGAAGATCACTGTT GTCAAAGCAGACAAGGTGAACTATACTTCTGAAAGTAGGCATCTGCTTGATCTGATCTCA AAGTGCCCTTAATAACCAATTGAAATGAGTTGACCCTTCTCGGGTTACAAGCTAATACTG AATTTGTTGTGACTATCAAACAACCATCGTCAGATCAATATTTGTTTACACCTAATAAAA CCAAGGTGTAGTCACTGTAATTCTTCACTTTAGAAAATTGATTTTCAGATTTTTTTTTTT TTTTTTTTCCTTTCGA