Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g01250.t01
CDS Infomation

cds chromosome:12X:11:1000358:1001752:1 gene:VIT_11s0016g01250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGAGTGGAAGAAATAGGTTTCCATTCACTGCAACTCAGTGGCAAGAGCTTGAACAC
CAAGCTCTCATCTTCAAGTACATGGCTTCAGGGATGCCCATTCCTCCTGATCTCATCTTC
TCCATCAAAAGAAGCTTGGACTCTCCACTCCCTACTTCAAAGCTCTTCCCAACCCACCAA
TCCCAACACATTGGGTGGAACTGTTTTCAGATGGGTTTGGGGAGGAAAGTAGACCCAGAG
CCAGGGAGGTGCAGAAGAACAGATGGGAAGAAATGGAGGTGTGCAAAGGAAGCATACCCA
GATTCGAAGTACTGTGAGAGACATATGCACCGAGGCAGAAACCGTTCAAGAAAGCCTGTG
GAAGTTATGACACCCTCAAAAACACCACCAACAGTAACTACTCCTACTGCTACAATGGCA
GCAAACCCACCACCACCAATCTCTTCAATCACTGTAAACTCCTCCAACCCCACTTCATAC
TCTCTAGCTTTAGAGACCCAAAATCACCACACCCATCGTCACCCTTCTTGCTACAACACC
CATCTCCACCTCCCCTTCCTTTATCCCCATTCATCTTCTTCAAGGCCACCTGGGTTTGGA
GGTGGGGTTGAGTTGTCACCTCAACACAACACCACCCATTTGCTTTTGGACTCTGGTTCA
TATTCCCAGACAGATTACAGAAACAGATATGTTCATGGATTGAAGGAGGAGGTGGATGAG
CATGCTTTCTTCTCAGAACAACCTTCAGGGGCTACAAGGAGTTTTTCCGGCTCATCAATG
GATGATCCTTGGCGGCTTACTCCACTAAAAATGAATTCTTCACCGTTAGACCATTCAAAA
CAGAGGAGCTGCTCTGTTTTACAGAGTGACTACTCTTGTTTGCAGCTTCAAAGCCTCAGT
GATACCTCCAACCAGAAGCAGGATCAGCATTTCTATGTACTGGGTAGTAATCTCAAGTAT
GAAAAACATGAGAGAGAAGAACCCGAGAAGACGGTGCACCGCTTCTTCGATGAATGGCCA
CCCAAGAGCAGAGATCCATGGCCTGATTCAGAAGACAAGTCCCCCAGAGATGCATTGGTC
TCAACCACCCAACTCTCAATTTCTATGCCAAACTCTTCATTTGACTTCTCCATCTCCAAT
TCTAGACCCCATAATGGTAGCTGA

Peptide Sequence

PEP ID

VIT_11s0016g01250.t01
PEP Infomation

pep chromosome:12X:11:1000358:1001752:1 gene:VIT_11s0016g01250 transcript:VIT_11s0016g01250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMSGRNRFPFTATQWQELEHQALIFKYMASGMPIPPDLIFSIKRSLDSPLPTSKLFPTHQ
SQHIGWNCFQMGLGRKVDPEPGRCRRTDGKKWRCAKEAYPDSKYCERHMHRGRNRSRKPV
EVMTPSKTPPTVTTPTATMAANPPPPISSITVNSSNPTSYSLALETQNHHTHRHPSCYNT
HLHLPFLYPHSSSSRPPGFGGGVELSPQHNTTHLLLDSGSYSQTDYRNRYVHGLKEEVDE
HAFFSEQPSGATRSFSGSSMDDPWRLTPLKMNSSPLDHSKQRSCSVLQSDYSCLQLQSLS
DTSNQKQDQHFYVLGSNLKYEKHEREEPEKTVHRFFDEWPPKSRDPWPDSEDKSPRDALV
STTQLSISMPNSSFDFSISNSRPHNGS

Transcript Sequence

Transcript ID

VIT_11s0016g01250.t01
Transcript Infomation

cdna chromosome:12X:11:1000358:1001752:1 gene:VIT_11s0016g01250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATGATGAGTGGAAGAAATAGGTTTCCATTCACTGCAACTCAGTGGCAAGAGCTTGAACA
CCAAGCTCTCATCTTCAAGTACATGGCTTCAGGGATGCCCATTCCTCCTGATCTCATCTT
CTCCATCAAAAGAAGCTTGGACTCTCCACTCCCTACTTCAAAGCTCTTCCCAACCCACCA
ATCCCAACACATTGGGTGGAACTGTTTTCAGATGGGTTTGGGGAGGAAAGTAGACCCAGA
GCCAGGGAGGTGCAGAAGAACAGATGGGAAGAAATGGAGGTGTGCAAAGGAAGCATACCC
AGATTCGAAGTACTGTGAGAGACATATGCACCGAGGCAGAAACCGTTCAAGAAAGCCTGT
GGAAGTTATGACACCCTCAAAAACACCACCAACAGTAACTACTCCTACTGCTACAATGGC
AGCAAACCCACCACCACCAATCTCTTCAATCACTGTAAACTCCTCCAACCCCACTTCATA
CTCTCTAGCTTTAGAGACCCAAAATCACCACACCCATCGTCACCCTTCTTGCTACAACAC
CCATCTCCACCTCCCCTTCCTTTATCCCCATTCATCTTCTTCAAGGCCACCTGGGTTTGG
AGGTGGGGTTGAGTTGTCACCTCAACACAACACCACCCATTTGCTTTTGGACTCTGGTTC
ATATTCCCAGACAGATTACAGAAACAGATATGTTCATGGATTGAAGGAGGAGGTGGATGA
GCATGCTTTCTTCTCAGAACAACCTTCAGGGGCTACAAGGAGTTTTTCCGGCTCATCAAT
GGATGATCCTTGGCGGCTTACTCCACTAAAAATGAATTCTTCACCGTTAGACCATTCAAA
ACAGAGGAGCTGCTCTGTTTTACAGAGTGACTACTCTTGTTTGCAGCTTCAAAGCCTCAG
TGATACCTCCAACCAGAAGCAGGATCAGCATTTCTATGTACTGGGTAGTAATCTCAAGTA
TGAAAAACATGAGAGAGAAGAACCCGAGAAGACGGTGCACCGCTTCTTCGATGAATGGCC
ACCCAAGAGCAGAGATCCATGGCCTGATTCAGAAGACAAGTCCCCCAGAGATGCATTGGT
CTCAACCACCCAACTCTCAATTTCTATGCCAAACTCTTCATTTGACTTCTCCATCTCCAA
TTCTAGACCCCATAATGGTAGCTGAATTCC