Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g01160.t01
CDS Infomation

cds chromosome:12X:11:928669:934396:1 gene:VIT_11s0016g01160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTCCCTCGACATGGAATTGTATTGCCATTGATGGGGATGTGCACAAGCAGAAGAGTC
ATCAAATCAAACATTGTCTTGCTATGTGAGAGCCCACACAACCTAGCCGTTGTAGCCTCC
AACGGCCAAATCTCCACCCATTTAAATTCAAAACACTCCATATCCTTCAGGGCAGTTCAA
CATCAATTTCAGAAGTTCCCAATCCAAATGGGTTCCTCTAAGTTCAGAACCCCTTGTTCT
TTCCTGAATCTTCTTCTCTCTTGTTTGAATTTCATTCTCTTTATCCTCTCTTCAGCCTCT
CTTGCACCCACCATCCTCCTCAGAATGCCCCCAACTTCACTGGGCTGGGCGTTTCTCATG
ATCTCATGCATCTCACTCTTCTCCTCCTTTGTTGGTTTTTACTCTCAGCTCACACACTTC
TGCTTCATAACCCATGTTTCACTTCTGCTCTCCTCTTCCATAGGCCAACTGCTGGGCATT
TTGGCCTTGTTTACCAGAGAGAATTCGAGCCTCTCCATGCTGAAATCGCCTCGGGACATG
AAGGAGGCTAAGCTTTTAGTGAGGTTGGAATGTGGGATTTTAATGGCAATGTTTGTAATG
CAAGTGGGGGTGTTGATATTGACTTGTATTATTCACAGCTGTTGGGTAAGAGAGTATGAG
GGGTTGGAGGCCGAGAGAGAGGCAGCGGCGAGGAAGAGGAGTAGGAGGATTGCGCGTGTG
CAGGAGGAGTCCATGGCAAATGCAGCAAAAATTGCAGAGGTAAAAGCCAAGGAGTTTGAT
GAGAAGATGAAAAACAAGTATGGGCAGGCAATGGATTCTAACTCCTCAACAAGGAAGAAG
GAAGAATTCTCAATAGAGATTCAGGCACCATCTGTTCCTCAGTTTAGAACAGAAAGGCCA
TCCAATCTCCAATTTGACCAGCTGCAGCCGTCAGATGAAGAATTCAATGAAGGGAGCAGG
GCTGAGTTTGGACCATTCATGGCACGAGCGGCTGTGCTGGATGAAGAATACTGGACAGCA
GCATGGCTGCGAGCAGAAAGTCACTGGGAGGGTAGACCAAATGAAAGATATGCTGAAAAC
TACAAAAGGAAATTTGCAGAGCAGGAGTTCAATGCATTAAAAAGACGATGCAGAGGACAA
AATGACCAGAAATACACCTGCATTGTGGCAGTAAAGAAGGAAGAGAGGGGTGTAAAACAA
ACAGTACTGAAAAGTGTAGTAGGAACCCTCGATTTGAGCATCCGATATTTGTTGAATGGA
GATACCTTTCCAGGGGAACAGGTTAAGGCTCCTCTTTTCTGCAGCATCAACAGAACTAGA
TCAAGCAAATATGGTTATGTTGCAAACTTATGTGTTGCCAAATCAGTGCGCCGCCAGGGC
ATTGCAAGCAATATGTTGCATTTTGCTGTTGAATCAGCCAAATCAATTGGTGTAGAACAG
GTATTTGTGCATGTGCATAGAAATAATGGACCTGCACAAGAACTGTACCAAAAAATGGGC
TTTGAGATGGTGGAAGTGGCAAGCTCTCAACTGTTACAGGAGCAAACCTACTTGCTTTGC
TTCAGGACATAG

Peptide Sequence

PEP ID

VIT_11s0016g01160.t01
PEP Infomation

pep chromosome:12X:11:928669:934396:1 gene:VIT_11s0016g01160 transcript:VIT_11s0016g01160.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVPRHGIVLPLMGMCTSRRVIKSNIVLLCESPHNLAVVASNGQISTHLNSKHSISFRAVQ
HQFQKFPIQMGSSKFRTPCSFLNLLLSCLNFILFILSSASLAPTILLRMPPTSLGWAFLM
ISCISLFSSFVGFYSQLTHFCFITHVSLLLSSSIGQLLGILALFTRENSSLSMLKSPRDM
KEAKLLVRLECGILMAMFVMQVGVLILTCIIHSCWVREYEGLEAEREAAARKRSRRIARV
QEESMANAAKIAEVKAKEFDEKMKNKYGQAMDSNSSTRKKEEFSIEIQAPSVPQFRTERP
SNLQFDQLQPSDEEFNEGSRAEFGPFMARAAVLDEEYWTAAWLRAESHWEGRPNERYAEN
YKRKFAEQEFNALKRRCRGQNDQKYTCIVAVKKEERGVKQTVLKSVVGTLDLSIRYLLNG
DTFPGEQVKAPLFCSINRTRSSKYGYVANLCVAKSVRRQGIASNMLHFAVESAKSIGVEQ
VFVHVHRNNGPAQELYQKMGFEMVEVASSQLLQEQTYLLCFRT

Transcript Sequence

Transcript ID

VIT_11s0016g01160.t01
Transcript Infomation

cdna chromosome:12X:11:928669:934396:1 gene:VIT_11s0016g01160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTCCCTCGACATGGAATTGTATTGCCATTGATGGGGATGTGCACAAGCAGAAGAGTC
ATCAAATCAAACATTGTCTTGCTATGTGAGAGCCCACACAACCTAGCCGTTGTAGCCTCC
AACGGCCAAATCTCCACCCATTTAAATTCAAAACACTCCATATCCTTCAGGGCAGTTCAA
CATCAATTTCAGAAGTTCCCAATCCAAATGGGTTCCTCTAAGTTCAGAACCCCTTGTTCT
TTCCTGAATCTTCTTCTCTCTTGTTTGAATTTCATTCTCTTTATCCTCTCTTCAGCCTCT
CTTGCACCCACCATCCTCCTCAGAATGCCCCCAACTTCACTGGGCTGGGCGTTTCTCATG
ATCTCATGCATCTCACTCTTCTCCTCCTTTGTTGGTTTTTACTCTCAGCTCACACACTTC
TGCTTCATAACCCATGTTTCACTTCTGCTCTCCTCTTCCATAGGCCAACTGCTGGGCATT
TTGGCCTTGTTTACCAGAGAGAATTCGAGCCTCTCCATGCTGAAATCGCCTCGGGACATG
AAGGAGGCTAAGCTTTTAGTGAGGTTGGAATGTGGGATTTTAATGGCAATGTTTGTAATG
CAAGTGGGGGTGTTGATATTGACTTGTATTATTCACAGCTGTTGGGTAAGAGAGTATGAG
GGGTTGGAGGCCGAGAGAGAGGCAGCGGCGAGGAAGAGGAGTAGGAGGATTGCGCGTGTG
CAGGAGGAGTCCATGGCAAATGCAGCAAAAATTGCAGAGGTAAAAGCCAAGGAGTTTGAT
GAGAAGATGAAAAACAAGTATGGGCAGGCAATGGATTCTAACTCCTCAACAAGGAAGAAG
GAAGAATTCTCAATAGAGATTCAGGCACCATCTGTTCCTCAGTTTAGAACAGAAAGGCCA
TCCAATCTCCAATTTGACCAGCTGCAGCCGTCAGATGAAGAATTCAATGAAGGGAGCAGG
GCTGAGTTTGGACCATTCATGGCACGAGCGGCTGTGCTGGATGAAGAATACTGGACAGCA
GCATGGCTGCGAGCAGAAAGTCACTGGGAGGGTAGACCAAATGAAAGATATGCTGAAAAC
TACAAAAGGAAATTTGCAGAGCAGGAGTTCAATGCATTAAAAAGACGATGCAGAGGACAA
AATGACCAGAAATACACCTGCATTGTGGCAGTAAAGAAGGAAGAGAGGGGTGTAAAACAA
ACAGTACTGAAAAGTGTAGTAGGAACCCTCGATTTGAGCATCCGATATTTGTTGAATGGA
GATACCTTTCCAGGGGAACAGGTTAAGGCTCCTCTTTTCTGCAGCATCAACAGAACTAGA
TCAAGCAAATATGGTTATGTTGCAAACTTATGTGTTGCCAAATCAGTGCGCCGCCAGGGC
ATTGCAAGCAATATGTTGCATTTTGCTGTTGAATCAGCCAAATCAATTGGTGTAGAACAG
GTATTTGTGCATGTGCATAGAAATAATGGACCTGCACAAGAACTGTACCAAAAAATGGGC
TTTGAGATGGTGGAAGTGGCAAGCTCTCAACTGTTACAGGAGCAAACCTACTTGCTTTGC
TTCAGGACATAGAACTTATTC