Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g01070.t01
CDS Infomation

cds chromosome:12X:11:879792:883795:1 gene:VIT_11s0016g01070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCGGCTCTCCGTCGTCGCCGCCGTCCTGATCCTGCTCTGCGCCGTCGCTTCCGGG
GAGGCTGACCATCATTTCCGATCAAGCTTCGATGAAGAGAACCCAATTAGACTGGTATCG
GACAGCATACGCGACTTGGAATCGTCCGTCCTCCGGCTGATCGGGGACACGCGTCACGCT
CACTCCTTCGCGAGCTTCGCTCACAGGTATGGGAAGAGTTACAAGACGGTGGACGAGATT
AAGCTGAGATTCGAGATTTTCTCGGAGAATTTGAAACTCATCAGATCCACCAACAGAAAG
GGCTTGCCTTATACTCTAGCTGTTAATCAGTTCGCTGATTGGACCTGGGAAGAGTTCCGC
AGACACAGGTTGGGAGCTGCTCAGAACTGCTCTGCCACCTTGAAGGGCAATCACAAGCTA
ACTGACGTTATCCTTCCTGAGACGAAAGATTGGAGAGAAGATGGCATAGTCAGCCCAATC
AAAGATCAAGGTCACTGTGGATCTTGCTGGACTTTCAGCACCACTGGAGCTCTAGAGGCA
GCTTACGCTCAGGCATTTGGGAAGGGGATCTCTCTGTCTGAGCAGCAGCTTGTGGACTGT
GCCGGAGCTTTCAATAACTTTGGATGCCACGGGGGATTGCCATCCCAAGCTTTTGAGTAC
ATCAAATACAATGGTGGCCTTGATACTGAGGAAGCATATCCTTACACTGGACTAGATGGC
ACCTGCAAATTTTCTTCAGAAAATATTGGTGTTCAAGTTCTCGACTCTGTGAATATTACC
CTGGGTGCTGAAGATGAGTTAAAGCATGCAGTTGCATTTGTTCGTCCAGTGAGTGTGGCA
TTTGAGGTGGTCCATGATTTCCGATTTTACAAGAAAGGAGTTTACACAAGTGGAACTTGT
GGCAGCACTCCCATGGATGTGAACCATGCTGTTCTTGCAGTCGGGTATGGAGTTGAAGAT
GGTGTAGCATACTGGCTCATCAAGAACTCATGGGGAGAAAACTGGGGCGACAATGGCTAC
TTCAAAATGGAGTTGGGCAAGAATATGTGTGGTGTGGCAACTTGCTCATCATATCCCGTT
GTTGCTTAA

Peptide Sequence

PEP ID

VIT_11s0016g01070.t01
PEP Infomation

pep chromosome:12X:11:879792:883795:1 gene:VIT_11s0016g01070 transcript:VIT_11s0016g01070.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MARLSVVAAVLILLCAVASGEADHHFRSSFDEENPIRLVSDSIRDLESSVLRLIGDTRHA
HSFASFAHRYGKSYKTVDEIKLRFEIFSENLKLIRSTNRKGLPYTLAVNQFADWTWEEFR
RHRLGAAQNCSATLKGNHKLTDVILPETKDWREDGIVSPIKDQGHCGSCWTFSTTGALEA
AYAQAFGKGISLSEQQLVDCAGAFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGLDG
TCKFSSENIGVQVLDSVNITLGAEDELKHAVAFVRPVSVAFEVVHDFRFYKKGVYTSGTC
GSTPMDVNHAVLAVGYGVEDGVAYWLIKNSWGENWGDNGYFKMELGKNMCGVATCSSYPV
VA

Transcript Sequence

Transcript ID

VIT_11s0016g01070.t01
Transcript Infomation

cdna chromosome:12X:11:879792:883795:1 gene:VIT_11s0016g01070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCCTTTAAAGCCCAATCCAATCCCCCGACGGCCCAAAAGCTCCGGAAGTAAGAAAAATG
GCTCGGCTCTCCGTCGTCGCCGCCGTCCTGATCCTGCTCTGCGCCGTCGCTTCCGGGGAG
GCTGACCATCATTTCCGATCAAGCTTCGATGAAGAGAACCCAATTAGACTGGTATCGGAC
AGCATACGCGACTTGGAATCGTCCGTCCTCCGGCTGATCGGGGACACGCGTCACGCTCAC
TCCTTCGCGAGCTTCGCTCACAGGTATGGGAAGAGTTACAAGACGGTGGACGAGATTAAG
CTGAGATTCGAGATTTTCTCGGAGAATTTGAAACTCATCAGATCCACCAACAGAAAGGGC
TTGCCTTATACTCTAGCTGTTAATCAGTTCGCTGATTGGACCTGGGAAGAGTTCCGCAGA
CACAGGTTGGGAGCTGCTCAGAACTGCTCTGCCACCTTGAAGGGCAATCACAAGCTAACT
GACGTTATCCTTCCTGAGACGAAAGATTGGAGAGAAGATGGCATAGTCAGCCCAATCAAA
GATCAAGGTCACTGTGGATCTTGCTGGACTTTCAGCACCACTGGAGCTCTAGAGGCAGCT
TACGCTCAGGCATTTGGGAAGGGGATCTCTCTGTCTGAGCAGCAGCTTGTGGACTGTGCC
GGAGCTTTCAATAACTTTGGATGCCACGGGGGATTGCCATCCCAAGCTTTTGAGTACATC
AAATACAATGGTGGCCTTGATACTGAGGAAGCATATCCTTACACTGGACTAGATGGCACC
TGCAAATTTTCTTCAGAAAATATTGGTGTTCAAGTTCTCGACTCTGTGAATATTACCCTG
GGTGCTGAAGATGAGTTAAAGCATGCAGTTGCATTTGTTCGTCCAGTGAGTGTGGCATTT
GAGGTGGTCCATGATTTCCGATTTTACAAGAAAGGAGTTTACACAAGTGGAACTTGTGGC
AGCACTCCCATGGATGTGAACCATGCTGTTCTTGCAGTCGGGTATGGAGTTGAAGATGGT
GTAGCATACTGGCTCATCAAGAACTCATGGGGAGAAAACTGGGGCGACAATGGCTACTTC
AAAATGGAGTTGGGCAAGAATATGTGTGGTGTGGCAACTTGCTCATCATATCCCGTTGTT
GCTTAAGCTGGTGGGCTCTTTCGAGGTTGTAGATTTGAATTGTTATTGTTCATATCTGAG
GTGAGGAGGGGAAGGGTCAGTACACTGATGAAGATGCAAGCTTTTATGTACAAAATAAAA
CCAAAGCATTTGCCCTCTATAAATGGTGGCTATGATGTACTCAACAAACACCCTTGTAAT
TTTCTATCTATGGTGGTGTGTTAGTTATCAATACATTTCCTTTGGTATTTAGTATTT