Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g01050.t01
CDS Infomation

cds chromosome:12X:11:865731:867363:1 gene:VIT_11s0016g01050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGCTCCTTCTTGTGTAGTTTTGGCCCTGGTGTGGCTAGCTGCAGCAGCCCTTCTC
TCAAAACTTTTCAGTTTCCGGCCAGCCCACAAGCAAAACCTTCCACCAGGCCCCAAACCA
TGGCGGATCATCGGCAACCTAAACCTCATTGGCCATCTCCCCCACCTGTCCCTCCACAAA
CTGTCCCAAAAATATGGACAAATAATGCAGCTTCAATTCGGGTCCTTCCCAGTTGTAGTG
GCCTCGTCTCCAGAAATGGCAAGGCAGTTCTTAAAGACAAATGATCACCTCTTTGCCTCT
AGGCCTCAGACTGCTGCTGGCAAGTACACTGCTTATAACTACTCCAACATCACCTGGGCA
CCTTACGGTCCATGCTGGCGCCAGGGGCGTAAAATCTTCCACACAGAGCTGTTCAGCTGG
AAAAGGCTCGAGTCTTGTGAATATATTCGGGTCGAAGAAAGGCGGGCTTTCGTCTCCCGC
CTCTATGCGTTGTCAGGAAAGCCAGTCATGCTTAAAGACCATCTCTCTCGCGTTACTCTC
AGCGTTATAAGCAGAATTGTACTGGGGGAGAAGTACTTCAATGAGTCTGAATCCGGGAGG
TCAATAGTGACGGTGGAAGAGTTCCAGGAGATGCTGGATGAGTTGTTCTTGCTTAATGGT
GTGTTGAATATTGGGGATTGGATACCTTGGATTGCATTCTTGGACTTGCAAGGGTATGTG
AAGAGGATGAAGGCCTTGCGTGATAAATTTGATAGGCTTTTTGATCATGTGATTGAGAAA
CACAGGGCCAGAAGAGAAGCAGCGGACTTTGTGGCTAAGGATATGGTGGATATGCTTCTG
AGATTGGCTGATGATCCTGATCTTGAGGTTAAGCTCGGTACTGATGGGGTCAAAGGGCTT
ACCCTGGACCTGCTTGCTGGTGGTACAGATACCTCAGCTACTACTATGGAATGGGCAATG
TCTGAGATCTTGAGGCAGCCAAGCATAGCTACGAAGGCAACTGAAGAGCTGGATAGAGTC
ATAGGGAGAGACAGATGGGTGGAAGAGAAAGACATCCCCCAACTTCCTTACATAGATGCA
ATTGTGAAGGAGACAATGAGGCTACACCCTGTTGCTGTCCTGCTTGCCCCTCACCTGGCT
CTTCAAGACTGCAATGTATCTGGCTATGATATTCGCAAAGGAACCCGAGTCCTAGTAAAC
GCATGGAGCATAGGGAGGGACCCCAACATATGGGATGCACCGGAGGAATTTCGCCCAGAG
AGGTTCCTAGGGAAGGCAATTGATGTGAACGGGCAAAACTTTGAGCTACTACCATTTGGT
TCAGGGCGGAGGATGTGTGTTGGATACAGGCTTGGCCTAAAGATGATTCAATCAAGCTTG
TCTAACATGTTGCATGGATTCCACTGGAAATTGCCTGGGGATATGAAGACAGAAGAGCTG
AACATGGAGGAAGTGTTTGGCCTTACAACTCCAAGGAAGGTCCCACTTGTTGCTGTCATG
GAGCCTAGACTCCCAAGTCATCTGTATTAG

Peptide Sequence

PEP ID

VIT_11s0016g01050.t01
PEP Infomation

pep chromosome:12X:11:865731:867363:1 gene:VIT_11s0016g01050 transcript:VIT_11s0016g01050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEAPSCVVLALVWLAAAALLSKLFSFRPAHKQNLPPGPKPWRIIGNLNLIGHLPHLSLHK
LSQKYGQIMQLQFGSFPVVVASSPEMARQFLKTNDHLFASRPQTAAGKYTAYNYSNITWA
PYGPCWRQGRKIFHTELFSWKRLESCEYIRVEERRAFVSRLYALSGKPVMLKDHLSRVTL
SVISRIVLGEKYFNESESGRSIVTVEEFQEMLDELFLLNGVLNIGDWIPWIAFLDLQGYV
KRMKALRDKFDRLFDHVIEKHRARREAADFVAKDMVDMLLRLADDPDLEVKLGTDGVKGL
TLDLLAGGTDTSATTMEWAMSEILRQPSIATKATEELDRVIGRDRWVEEKDIPQLPYIDA
IVKETMRLHPVAVLLAPHLALQDCNVSGYDIRKGTRVLVNAWSIGRDPNIWDAPEEFRPE
RFLGKAIDVNGQNFELLPFGSGRRMCVGYRLGLKMIQSSLSNMLHGFHWKLPGDMKTEEL
NMEEVFGLTTPRKVPLVAVMEPRLPSHLY

Transcript Sequence

Transcript ID

VIT_11s0016g01050.t01
Transcript Infomation

cdna chromosome:12X:11:865731:867363:1 gene:VIT_11s0016g01050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCAATGGAGGCTCCTTCTTGTGTAGTTTTGGCCCTGGTGTGGCTAGCTGCAGCAGCCCTT
CTCTCAAAACTTTTCAGTTTCCGGCCAGCCCACAAGCAAAACCTTCCACCAGGCCCCAAA
CCATGGCGGATCATCGGCAACCTAAACCTCATTGGCCATCTCCCCCACCTGTCCCTCCAC
AAACTGTCCCAAAAATATGGACAAATAATGCAGCTTCAATTCGGGTCCTTCCCAGTTGTA
GTGGCCTCGTCTCCAGAAATGGCAAGGCAGTTCTTAAAGACAAATGATCACCTCTTTGCC
TCTAGGCCTCAGACTGCTGCTGGCAAGTACACTGCTTATAACTACTCCAACATCACCTGG
GCACCTTACGGTCCATGCTGGCGCCAGGGGCGTAAAATCTTCCACACAGAGCTGTTCAGC
TGGAAAAGGCTCGAGTCTTGTGAATATATTCGGGTCGAAGAAAGGCGGGCTTTCGTCTCC
CGCCTCTATGCGTTGTCAGGAAAGCCAGTCATGCTTAAAGACCATCTCTCTCGCGTTACT
CTCAGCGTTATAAGCAGAATTGTACTGGGGGAGAAGTACTTCAATGAGTCTGAATCCGGG
AGGTCAATAGTGACGGTGGAAGAGTTCCAGGAGATGCTGGATGAGTTGTTCTTGCTTAAT
GGTGTGTTGAATATTGGGGATTGGATACCTTGGATTGCATTCTTGGACTTGCAAGGGTAT
GTGAAGAGGATGAAGGCCTTGCGTGATAAATTTGATAGGCTTTTTGATCATGTGATTGAG
AAACACAGGGCCAGAAGAGAAGCAGCGGACTTTGTGGCTAAGGATATGGTGGATATGCTT
CTGAGATTGGCTGATGATCCTGATCTTGAGGTTAAGCTCGGTACTGATGGGGTCAAAGGG
CTTACCCTGGACCTGCTTGCTGGTGGTACAGATACCTCAGCTACTACTATGGAATGGGCA
ATGTCTGAGATCTTGAGGCAGCCAAGCATAGCTACGAAGGCAACTGAAGAGCTGGATAGA
GTCATAGGGAGAGACAGATGGGTGGAAGAGAAAGACATCCCCCAACTTCCTTACATAGAT
GCAATTGTGAAGGAGACAATGAGGCTACACCCTGTTGCTGTCCTGCTTGCCCCTCACCTG
GCTCTTCAAGACTGCAATGTATCTGGCTATGATATTCGCAAAGGAACCCGAGTCCTAGTA
AACGCATGGAGCATAGGGAGGGACCCCAACATATGGGATGCACCGGAGGAATTTCGCCCA
GAGAGGTTCCTAGGGAAGGCAATTGATGTGAACGGGCAAAACTTTGAGCTACTACCATTT
GGTTCAGGGCGGAGGATGTGTGTTGGATACAGGCTTGGCCTAAAGATGATTCAATCAAGC
TTGTCTAACATGTTGCATGGATTCCACTGGAAATTGCCTGGGGATATGAAGACAGAAGAG
CTGAACATGGAGGAAGTGTTTGGCCTTACAACTCCAAGGAAGGTCCCACTTGTTGCTGTC
ATGGAGCCTAGACTCCCAAGTCATCTGTATTAG