Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g00980.t01
CDS Infomation

cds chromosome:12X:11:833818:835545:1 gene:VIT_11s0016g00980 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTTCAATATGTGGTATCCACCAGCTTAATTGCTCACAAATAATCCCCCATTCCTCA
AACTTTCACCACCCACAACCACCACCACCACCACCACCAATGGAGGCTCCTTGTGTTGTT
TTGGCCCTAGTGTGGCTAGCTGCAGCAGCCCTTCTCTCAAAACTTTTCAGTTTCCGGCCA
CCCCACAAGCAAAACCTTCCACCAGGCCCCAAACCATGGCCGATCATCGGCAACCTAAAT
CTCATTGGCCATCTCCCCCACCTGTCCCTCCACAAACTGTCCCAAAAATATGGACAAATA
ATGCAGCTTCAATTCGGGTCTTTCCCAGTTGTAGTGGCCTCGTCTCCTGAAATGGCAAAG
CAGTTCTTAAAGACAAACGATCACCTCTTTGCCTCTAGGCCTCAGACTGCTGCTGGCAAG
TACACTGCTTATAACTACTCCAACATCACCTGGGCACCTTACGGTCCATACTGGCGCCAG
GGGCGTAAAATCTACCACACAGAGCTGTTCAGTTGGAAAAGGCTCGAGTCTTATGAATAT
ATTCAGGTCGAAGAAAGGCGGGCTTTCATCTCCCGTCTCTATGCATTGTCAGGAAAGCCA
GTCATGCTTAAAGAACATCTCTCTCGCGTTACTCTCAGCGTTATAAGTAGAATTGTACTG
GGGGAGAAGTACTTCAATGAGTCTGAATCCGGGAGGTCAATAGTCACGGTGAAAGAGTTC
CAGGAGATGCTGGATGAGTTGTTCTTGCTTAATGGTGTGTTGAATATTGGGGATTGGATA
CCGTGGATTGCGTTCTTGGACTTGCAGGGGTATGTGAAGAGGATGAAGGTTTTGCGTGAT
AAATTTGACCGGTTTCATGATCATGTGCTTGAGAAACACAGGGCCAGGAGAGAAGTAGGG
GACTTTGTGGTTAAGGATATGGTGGATATGCTTCTGAGATTGGCTGATGATCCCGATCTT
CAAGTTAAGCTCACTACTGATGGGATCAAAGGGTTTACACAGGACCTAATAGCTGGTGGT
ACAGATACCTCAGCTACTACTCTGGAATGGGCGATGTCCGAGGTCTTGAGGCAGCCAAAC
ATAGCTAACAAGGCAACCGAAGAGCTGGATAGAGTTATAGGGAGAAATAGATGGGTGGAA
GAGAAAGACATTCCCCAACTTCCTTACATAGATGCAATTGTGAAGGAGACAATGAGGCTA
CACCCTGTTGCTGTCCTGCTTGCCCCTCACCTGGCTCTTCATGACTGCAATGTAGCTGGC
TATGATATTCGCAAAGGAACCCGAGTCCTAATAAACACATGGAGCATAGGGCGGGACCCC
AATCTATGGGATGCACCTGAGGAATTTCGCCCAGAGAGGTTCCTAGGGAAGGCAATTGAT
GTGAAGGGGCAAAACTTCGAGCTGCTGCCATTTGGTTCAGGGCGGAGGATGTGTCCTGGC
TACAGCCTTGGCCTAAAGATGATTCGATCCAGCTTGGCTAACATGTTGCATGGATTCCAC
TGGAAATTGCCTGGGGATATGAAGGCAGAAGAGCTGAACATGGAGGAAGTTTTTGGACTG
GCAACTCCAAGGAAGGTCCCACTTGTTGCTGTCATGGAGCCTAGACTCCCAAGTCATCTT
TACTAG

Peptide Sequence

PEP ID

VIT_11s0016g00980.t01
PEP Infomation

pep chromosome:12X:11:833818:835545:1 gene:VIT_11s0016g00980 transcript:VIT_11s0016g00980.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSICGIHQLNCSQIIPHSSNFHHPQPPPPPPPMEAPCVVLALVWLAAAALLSKLFSFRP
PHKQNLPPGPKPWPIIGNLNLIGHLPHLSLHKLSQKYGQIMQLQFGSFPVVVASSPEMAK
QFLKTNDHLFASRPQTAAGKYTAYNYSNITWAPYGPYWRQGRKIYHTELFSWKRLESYEY
IQVEERRAFISRLYALSGKPVMLKEHLSRVTLSVISRIVLGEKYFNESESGRSIVTVKEF
QEMLDELFLLNGVLNIGDWIPWIAFLDLQGYVKRMKVLRDKFDRFHDHVLEKHRARREVG
DFVVKDMVDMLLRLADDPDLQVKLTTDGIKGFTQDLIAGGTDTSATTLEWAMSEVLRQPN
IANKATEELDRVIGRNRWVEEKDIPQLPYIDAIVKETMRLHPVAVLLAPHLALHDCNVAG
YDIRKGTRVLINTWSIGRDPNLWDAPEEFRPERFLGKAIDVKGQNFELLPFGSGRRMCPG
YSLGLKMIRSSLANMLHGFHWKLPGDMKAEELNMEEVFGLATPRKVPLVAVMEPRLPSHL
Y

Transcript Sequence

Transcript ID

VIT_11s0016g00980.t01
Transcript Infomation

cdna chromosome:12X:11:833818:835545:1 gene:VIT_11s0016g00980 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTTCAATATGTGGTATCCACCAGCTTAATTGCTCACAAATAATCCCCCATTCCTCA
AACTTTCACCACCCACAACCACCACCACCACCACCACCAATGGAGGCTCCTTGTGTTGTT
TTGGCCCTAGTGTGGCTAGCTGCAGCAGCCCTTCTCTCAAAACTTTTCAGTTTCCGGCCA
CCCCACAAGCAAAACCTTCCACCAGGCCCCAAACCATGGCCGATCATCGGCAACCTAAAT
CTCATTGGCCATCTCCCCCACCTGTCCCTCCACAAACTGTCCCAAAAATATGGACAAATA
ATGCAGCTTCAATTCGGGTCTTTCCCAGTTGTAGTGGCCTCGTCTCCTGAAATGGCAAAG
CAGTTCTTAAAGACAAACGATCACCTCTTTGCCTCTAGGCCTCAGACTGCTGCTGGCAAG
TACACTGCTTATAACTACTCCAACATCACCTGGGCACCTTACGGTCCATACTGGCGCCAG
GGGCGTAAAATCTACCACACAGAGCTGTTCAGTTGGAAAAGGCTCGAGTCTTATGAATAT
ATTCAGGTCGAAGAAAGGCGGGCTTTCATCTCCCGTCTCTATGCATTGTCAGGAAAGCCA
GTCATGCTTAAAGAACATCTCTCTCGCGTTACTCTCAGCGTTATAAGTAGAATTGTACTG
GGGGAGAAGTACTTCAATGAGTCTGAATCCGGGAGGTCAATAGTCACGGTGAAAGAGTTC
CAGGAGATGCTGGATGAGTTGTTCTTGCTTAATGGTGTGTTGAATATTGGGGATTGGATA
CCGTGGATTGCGTTCTTGGACTTGCAGGGGTATGTGAAGAGGATGAAGGTTTTGCGTGAT
AAATTTGACCGGTTTCATGATCATGTGCTTGAGAAACACAGGGCCAGGAGAGAAGTAGGG
GACTTTGTGGTTAAGGATATGGTGGATATGCTTCTGAGATTGGCTGATGATCCCGATCTT
CAAGTTAAGCTCACTACTGATGGGATCAAAGGGTTTACACAGGACCTAATAGCTGGTGGT
ACAGATACCTCAGCTACTACTCTGGAATGGGCGATGTCCGAGGTCTTGAGGCAGCCAAAC
ATAGCTAACAAGGCAACCGAAGAGCTGGATAGAGTTATAGGGAGAAATAGATGGGTGGAA
GAGAAAGACATTCCCCAACTTCCTTACATAGATGCAATTGTGAAGGAGACAATGAGGCTA
CACCCTGTTGCTGTCCTGCTTGCCCCTCACCTGGCTCTTCATGACTGCAATGTAGCTGGC
TATGATATTCGCAAAGGAACCCGAGTCCTAATAAACACATGGAGCATAGGGCGGGACCCC
AATCTATGGGATGCACCTGAGGAATTTCGCCCAGAGAGGTTCCTAGGGAAGGCAATTGAT
GTGAAGGGGCAAAACTTCGAGCTGCTGCCATTTGGTTCAGGGCGGAGGATGTGTCCTGGC
TACAGCCTTGGCCTAAAGATGATTCGATCCAGCTTGGCTAACATGTTGCATGGATTCCAC
TGGAAATTGCCTGGGGATATGAAGGCAGAAGAGCTGAACATGGAGGAAGTTTTTGGACTG
GCAACTCCAAGGAAGGTCCCACTTGTTGCTGTCATGGAGCCTAGACTCCCAAGTCATCTT
TACTAG