Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g00900.t01
CDS Infomation

cds chromosome:12X:11:787578:794926:-1 gene:VIT_11s0016g00900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTTTCGAGAGAAAAGAGTACCAATTTCTGGCGGAGATCGGAGTCGGTCCGGCGAAT
CCTGGATGTTACATCAACGGAGAGTGGAAGGCACGCGGCCCGCTCGTCTCTTCTGTGAAT
CCGTCGAACAATCAGAGGATTGCGGTGGTGACGGAGGCGTCTATTGAAGATTACGAGGAG
GGGCTGATGGCTTGCAGTGAAGCAGCAAAGACGTGGATGAAGATTCCGGCGCCGAAGCGA
GGTGAGATTGTGAGGCAGATTGGGGAAGCGCTTAGAGCGAAATTGGGGAGTCTTGGTCGG
CTTGTGTCGCTGGAGATGGGGAAAATACTGGCTGAAGGAATCGGAGAGGTTCAGGAAATT
GTTGATATGTGTGATTATGCTGTTGGGTTAAGTCGACAAATAAATGGATCCATCATACCT
TCTGAACGTCCAGACCATATGATGTGTGAGGTGTGGAATCCCATGGGCATAGTTGGTGTG
ATTACTGCTTTCAACTTTCCATGTGCTGTCCTTGGATGGAATGCCTGCCTCGCATTAGTA
TGTGGTAATTGTGTTGTGTGGAAGGGTGCTCCAACAACTCCACTAGTCACCATTGCCGTG
ACAAAGCTAGTGGCTGAAGTTCTTGAGAAAAACAACTTGCCAGGTGCAATATTCACCTCT
TTTTGTGGAGGTGCTGAAATTGGTGAAGCCATATCAAAAGACGCTCGCATTCCCCTGGTT
TCATTCACTGGGAGTTCAAAGGTGGGTCTAATGGTCCAACAAGCTGTCAACCAAAGATTT
GGTAAATGCTTGCTTGAATTAAGTGGGAACAATGCCATCATTATCATGGAAGATGCTGAC
ATTGGGCTAGCAGTACGGTCTGTTTTGTTTGCTGCTGTTGGCACGGCTGGCCAGCGCTGC
ACCACGTGTCGTAGGCTGCTAGTTCATGAAAGTATATATGAGACTGTATTGAATCAACTG
ATTGATGTCTATAAACAAGTCAAAATGGGGGACCCTTTAGAAAAAAGTACCCTTGTTGGA
CCACTGCATACTCGTGCTTCGAAGGAGAACTTTGAGAAGGGCATTGAGATCATAAAATTT
CAGGGAGGAAATATTCTGATTGGTGGGTCCACTGTAGAATCTGAGGGAAATTTTGTGCAG
CCAACAATCGTTGAGATTTCTCCAAATGCCTCTGTAGTTAAGGAAGAATTGTTCGGTCCA
GTTCTTTATGTGATGAAATTTCAGACTTTTGAAGAAGCAGTTGAAATGAACAACTCTGTA
CCACAAGGATTGAGTAGTTCAATCTTCACTCGCAAACCTGAAGTTATCTTCAAATGGATT
GGGCCACATGGAAGTGACTGTGGTATTGTGAATGTAAATATACCTACAAATGGAGCTGAG
ATTGGTGGAGCTTTTGGGGGAGAAAAGGCAACTGGTGGTGGTCGTGAAGCAGGAAGCGAC
TCCTGGAAACAATACATGCGGCGTTCAACATGTACAATCAATTATGGAAATGAGCTACCA
CTGGCTCAGGGTATCAATTTTGGCTAG

Peptide Sequence

PEP ID

VIT_11s0016g00900.t01
PEP Infomation

pep chromosome:12X:11:787578:794926:-1 gene:VIT_11s0016g00900 transcript:VIT_11s0016g00900.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSFERKEYQFLAEIGVGPANPGCYINGEWKARGPLVSSVNPSNNQRIAVVTEASIEDYEE
GLMACSEAAKTWMKIPAPKRGEIVRQIGEALRAKLGSLGRLVSLEMGKILAEGIGEVQEI
VDMCDYAVGLSRQINGSIIPSERPDHMMCEVWNPMGIVGVITAFNFPCAVLGWNACLALV
CGNCVVWKGAPTTPLVTIAVTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAISKDARIPLV
SFTGSSKVGLMVQQAVNQRFGKCLLELSGNNAIIIMEDADIGLAVRSVLFAAVGTAGQRC
TTCRRLLVHESIYETVLNQLIDVYKQVKMGDPLEKSTLVGPLHTRASKENFEKGIEIIKF
QGGNILIGGSTVESEGNFVQPTIVEISPNASVVKEELFGPVLYVMKFQTFEEAVEMNNSV
PQGLSSSIFTRKPEVIFKWIGPHGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSD
SWKQYMRRSTCTINYGNELPLAQGINFG

Transcript Sequence

Transcript ID

VIT_11s0016g00900.t01
Transcript Infomation

cdna chromosome:12X:11:787578:794926:-1 gene:VIT_11s0016g00900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAGAAGGCGACACTCACACAAATTTTATCCTTTCAACCGGTTACTTAAATCGGTGAATC
CTTGTCGTTCTTCTCTCTGATCGCATCGTCTCTCGTTCCCAATCTTAATTGCATTTCTGA
GGTGTTTTTGTTATCTGAGGTTTTGATCTTAATCCTAGAGAATCATCGCAGTTGTGGAGA
TGTCTTTCGAGAGAAAAGAGTACCAATTTCTGGCGGAGATCGGAGTCGGTCCGGCGAATC
CTGGATGTTACATCAACGGAGAGTGGAAGGCACGCGGCCCGCTCGTCTCTTCTGTGAATC
CGTCGAACAATCAGAGGATTGCGGTGGTGACGGAGGCGTCTATTGAAGATTACGAGGAGG
GGCTGATGGCTTGCAGTGAAGCAGCAAAGACGTGGATGAAGATTCCGGCGCCGAAGCGAG
GTGAGATTGTGAGGCAGATTGGGGAAGCGCTTAGAGCGAAATTGGGGAGTCTTGGTCGGC
TTGTGTCGCTGGAGATGGGGAAAATACTGGCTGAAGGAATCGGAGAGGTTCAGGAAATTG
TTGATATGTGTGATTATGCTGTTGGGTTAAGTCGACAAATAAATGGATCCATCATACCTT
CTGAACGTCCAGACCATATGATGTGTGAGGTGTGGAATCCCATGGGCATAGTTGGTGTGA
TTACTGCTTTCAACTTTCCATGTGCTGTCCTTGGATGGAATGCCTGCCTCGCATTAGTAT
GTGGTAATTGTGTTGTGTGGAAGGGTGCTCCAACAACTCCACTAGTCACCATTGCCGTGA
CAAAGCTAGTGGCTGAAGTTCTTGAGAAAAACAACTTGCCAGGTGCAATATTCACCTCTT
TTTGTGGAGGTGCTGAAATTGGTGAAGCCATATCAAAAGACGCTCGCATTCCCCTGGTTT
CATTCACTGGGAGTTCAAAGGTGGGTCTAATGGTCCAACAAGCTGTCAACCAAAGATTTG
GTAAATGCTTGCTTGAATTAAGTGGGAACAATGCCATCATTATCATGGAAGATGCTGACA
TTGGGCTAGCAGTACGGTCTGTTTTGTTTGCTGCTGTTGGCACGGCTGGCCAGCGCTGCA
CCACGTGTCGTAGGCTGCTAGTTCATGAAAGTATATATGAGACTGTATTGAATCAACTGA
TTGATGTCTATAAACAAGTCAAAATGGGGGACCCTTTAGAAAAAAGTACCCTTGTTGGAC
CACTGCATACTCGTGCTTCGAAGGAGAACTTTGAGAAGGGCATTGAGATCATAAAATTTC
AGGGAGGAAATATTCTGATTGGTGGGTCCACTGTAGAATCTGAGGGAAATTTTGTGCAGC
CAACAATCGTTGAGATTTCTCCAAATGCCTCTGTAGTTAAGGAAGAATTGTTCGGTCCAG
TTCTTTATGTGATGAAATTTCAGACTTTTGAAGAAGCAGTTGAAATGAACAACTCTGTAC
CACAAGGATTGAGTAGTTCAATCTTCACTCGCAAACCTGAAGTTATCTTCAAATGGATTG
GGCCACATGGAAGTGACTGTGGTATTGTGAATGTAAATATACCTACAAATGGAGCTGAGA
TTGGTGGAGCTTTTGGGGGAGAAAAGGCAACTGGTGGTGGTCGTGAAGCAGGAAGCGACT
CCTGGAAACAATACATGCGGCGTTCAACATGTACAATCAATTATGGAAATGAGCTACCAC
TGGCTCAGGGTATCAATTTTGGCTAGCAACTACTGTGGAGGTATGTACTGTCTGTTCATT
GGGAATAATCTTCCATCCGGTACTGAGGGATGAAGCAGGTAAAATCACGCTTATGGGGTA
GTTCATTGGAGTATCTATATGATTTGCAGGTGTTAAGGCACGTGAAAAGTTCCAAAAGGA
ATGTTGGAA