Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g00820.t01
CDS Infomation

cds chromosome:12X:11:746058:751628:-1 gene:VIT_11s0016g00820 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAGGGGGATTTTATGCGTTGCGGGGTAAACAACTCTCTCTCATCCTCCTTGTTCTT
GTGTGCACAACCATTCTTATTTGGGCATGGGAGAAAACCCCGCTTCTTACAACCTTACTT
CCACCTCAGAATCGCTTGTTGCAGCTGTATCCAGGTCCTGCTTTAGAAAGCTCGTCAAAA
CCACCAATACATAAGAACAAAGATATATCTACTTCTCCGGAAGACAAAGAAGTGGTGAAT
GGCCAAGAAGAAAAAGCTTTTAGTTTAGTAGATCAGTTGAATCCTGAAAAAAGCTCCCCT
GGAATTTGGAACAGTGACAGCAATGTGATAACTCCCTCTGATGAGAAGAAAGGAGATCCC
ATAAATGTCCCCAAAGAAGAATCCAGAGACAATAGAGTGCCAGAAGGAAAGAGTAGTTCA
AAAAAAGCAGAAGACGTGGATTTGGTTGTAGCAGCACCAATAAGCTCTGCGAATAAAAGC
TCTTCACTAGAGGGAAAAGAATATAAAAATTCAACAATAAGTGCAGGAAATCAAGCCTGT
AACTATGCTATAGGAAAATGGGTTGAGGATGATAGTCGACCTTTTTATTCTGGGTTTGAA
TGCAAGCAATGGCTATCGCCAATGTGGGCTTGCCGGTTGACGGAGCGCACAGATTTTGCA
TATGAGAAGTTTCAGTGGCGGCCAAAAAATTGTAAAATGGACAAATTTACAGGGTCAAAC
TTCTTGAGAAGGATGCAGGACAAAACCCTAGCTTTTATTGGGGATTCATTGGGCAGACAG
CAGTTCCAATCTCTAATGTGCATGATCACGGGTGGTAAGGAAAGTCCTGATGTCACTAGC
GTGGGATGGAAGTATGGTCTGGTCAAAGCTCGTGGTGCTCTACGCCCTGATGGGTGGGCA
TATTGGTTCCCAGGCACCAATACTACCATCCTCTATTACTGGTCAGCAAGCCTTTGTGAC
TTGGAACCACTTAACAGCGTGAACCCAACCATGGATTATGCCATGCACCTTGATCGGCCA
CCGGCATTCCTGCGTAGATTCCTTAACAAGTTTGATGTTCTGGTTCTCAACACAGGACAC
CATTGGAACAGAGGGAAGCTTAAGGCAAACAGGTGGGTCATGCATGTAGGAGGTGTGCCC
AACACTGATACAAAGATAGCAGAAATTGGAGGGGCAAAAAATCTCACTATCCACAGTATT
GTCAAGTGGGTAGACTCACAGCTCCCAAAATATCCAGGCTTGAAAGCATTCTACAGGACT
ATCTCTCCTAGGCATTTCTTTAATGGGGACTGGAACACAGGAGGGAGCTGTGACAACACC
ACCCCTCTGTCTGATGGGAAAGAAGTTTTAAAAGACGAATCTCTGGATCCTGTTGCAGTG
GCAGCTGTGAAGGGGACGAGGGTTAAGCTCTTGGACATAACAGCATCATCGCAACTTAGA
GACGAGGGTCATATATCTCGGTATAGCATCAGAGCCACACCAGGAGTGCAGGATTGCTTG
CACTGGTGTTTACCCGGCATTCCTGATATGTGGAATGAAATCCTCTTTGCACAGCTTTAG

Peptide Sequence

PEP ID

VIT_11s0016g00820.t01
PEP Infomation

pep chromosome:12X:11:746058:751628:-1 gene:VIT_11s0016g00820 transcript:VIT_11s0016g00820.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKGGFYALRGKQLSLILLVLVCTTILIWAWEKTPLLTTLLPPQNRLLQLYPGPALESSSK
PPIHKNKDISTSPEDKEVVNGQEEKAFSLVDQLNPEKSSPGIWNSDSNVITPSDEKKGDP
INVPKEESRDNRVPEGKSSSKKAEDVDLVVAAPISSANKSSSLEGKEYKNSTISAGNQAC
NYAIGKWVEDDSRPFYSGFECKQWLSPMWACRLTERTDFAYEKFQWRPKNCKMDKFTGSN
FLRRMQDKTLAFIGDSLGRQQFQSLMCMITGGKESPDVTSVGWKYGLVKARGALRPDGWA
YWFPGTNTTILYYWSASLCDLEPLNSVNPTMDYAMHLDRPPAFLRRFLNKFDVLVLNTGH
HWNRGKLKANRWVMHVGGVPNTDTKIAEIGGAKNLTIHSIVKWVDSQLPKYPGLKAFYRT
ISPRHFFNGDWNTGGSCDNTTPLSDGKEVLKDESLDPVAVAAVKGTRVKLLDITASSQLR
DEGHISRYSIRATPGVQDCLHWCLPGIPDMWNEILFAQL

Transcript Sequence

Transcript ID

VIT_11s0016g00820.t01
Transcript Infomation

cdna chromosome:12X:11:746058:751628:-1 gene:VIT_11s0016g00820 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAAGATCTTCTTAGTTTTCTCCGCGTTATTCTCGTCCGTACCCCTAGATCGCTCATTTA
TTATCTAAACCCCTTCCACCGTCCATCGGCTTTCCGTTTCCCGTTGTCTTTCATTTTCCA
TTTCTATTTGTTTTCTAATTTTTTTAATCTTTCAGAGTAGTTCAGAGAGTTCGCTTTCAG
TAGGGAGTTTCGGTTTCGATTCTGATCTGGAAAATCATAGATGTGGTGGTTGTGTTATTC
TTGTTTAATAATTTGTAATAGAATTGTAAGATCTGATTTCGGTTTGTGTAGCCCTTTTGC
TGCTGTTGTTTGTTTGTTTGAAATTATTAGAAGGATATGGTGGGGTGATGAAATGTGGGA
ACTTTTCCCCTTTTTGGGATGAAGTGATCAGGCAGTGTGTTAGTCTTCTATTTGGTAGAA
GATTCATTTGTCTGGGCTTTAGGTGGAATGTGGGCATTCATTTTAGTAAATCAGGTCTAA
CTTTGGTAATGAACCAACTTCATGAACTAAATCACTATAACGGGCAGAGTATGGTGGCTG
TAATTTTGAAGTTTTGGGATTTCATTTTGAAAATAATCACAGGCTGCCTTATGGCAATAA
GATTATTAGAGGGAATAAGCTCTTTTCTTGTCCAATTCCAGATCCAGGTTTTTTTTTCCT
TGTGAAATTTGTGTCTCTATGAGCTTTGTTTTTCTTGCCCTAATTATCTATGTTTGCTGC
TATAAATTGAATGATTCAAGAGAATTCAATGCATTTGTAGGCATCTGAACACTTTTAATT
TCATATATTTTGTGTGCACTAAGGATGAAAGGGGGATTTTATGCGTTGCGGGGTAAACAA
CTCTCTCTCATCCTCCTTGTTCTTGTGTGCACAACCATTCTTATTTGGGCATGGGAGAAA
ACCCCGCTTCTTACAACCTTACTTCCACCTCAGAATCGCTTGTTGCAGCTGTATCCAGGT
CCTGCTTTAGAAAGCTCGTCAAAACCACCAATACATAAGAACAAAGATATATCTACTTCT
CCGGAAGACAAAGAAGTGGTGAATGGCCAAGAAGAAAAAGCTTTTAGTTTAGTAGATCAG
TTGAATCCTGAAAAAAGCTCCCCTGGAATTTGGAACAGTGACAGCAATGTGATAACTCCC
TCTGATGAGAAGAAAGGAGATCCCATAAATGTCCCCAAAGAAGAATCCAGAGACAATAGA
GTGCCAGAAGGAAAGAGTAGTTCAAAAAAAGCAGAAGACGTGGATTTGGTTGTAGCAGCA
CCAATAAGCTCTGCGAATAAAAGCTCTTCACTAGAGGGAAAAGAATATAAAAATTCAACA
ATAAGTGCAGGAAATCAAGCCTGTAACTATGCTATAGGAAAATGGGTTGAGGATGATAGT
CGACCTTTTTATTCTGGGTTTGAATGCAAGCAATGGCTATCGCCAATGTGGGCTTGCCGG
TTGACGGAGCGCACAGATTTTGCATATGAGAAGTTTCAGTGGCGGCCAAAAAATTGTAAA
ATGGACAAATTTACAGGGTCAAACTTCTTGAGAAGGATGCAGGACAAAACCCTAGCTTTT
ATTGGGGATTCATTGGGCAGACAGCAGTTCCAATCTCTAATGTGCATGATCACGGGTGGT
AAGGAAAGTCCTGATGTCACTAGCGTGGGATGGAAGTATGGTCTGGTCAAAGCTCGTGGT
GCTCTACGCCCTGATGGGTGGGCATATTGGTTCCCAGGCACCAATACTACCATCCTCTAT
TACTGGTCAGCAAGCCTTTGTGACTTGGAACCACTTAACAGCGTGAACCCAACCATGGAT
TATGCCATGCACCTTGATCGGCCACCGGCATTCCTGCGTAGATTCCTTAACAAGTTTGAT
GTTCTGGTTCTCAACACAGGACACCATTGGAACAGAGGGAAGCTTAAGGCAAACAGGTGG
GTCATGCATGTAGGAGGTGTGCCCAACACTGATACAAAGATAGCAGAAATTGGAGGGGCA
AAAAATCTCACTATCCACAGTATTGTCAAGTGGGTAGACTCACAGCTCCCAAAATATCCA
GGCTTGAAAGCATTCTACAGGACTATCTCTCCTAGGCATTTCTTTAATGGGGACTGGAAC
ACAGGAGGGAGCTGTGACAACACCACCCCTCTGTCTGATGGGAAAGAAGTTTTAAAAGAC
GAATCTCTGGATCCTGTTGCAGTGGCAGCTGTGAAGGGGACGAGGGTTAAGCTCTTGGAC
ATAACAGCATCATCGCAACTTAGAGACGAGGGTCATATATCTCGGTATAGCATCAGAGCC
ACACCAGGAGTGCAGGATTGCTTGCACTGGTGTTTACCCGGCATTCCTGATATGTGGAAT
GAAATCCTCTTTGCACAGCTTTAGTCCAAGGAAGCGGCTGCAGAACGAAGAATCCCCATG
GCATGCCTTGGAATTATAGGAGCTATCTCGACGCTCAAACCAATAGCAAATATTGAATAC
TGCACTTCTCCACGGGATACAATCTCATAGGATATTGACCTCATTTTTTCACTATTTTTT
GTGCTGTATCACTATCTTAGGCCTAGAAGGGCCTGAGAAAGAGAGAAGGGTGGGTGGGGG
TGTTGGAGAAGATG