Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_11s0016g00640.t01
CDS Infomation	cds chromosome:12X:11:629393:640201:1 gene:VIT_11s0016g00640 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin response factor [Source:UniProtKB/TrEMBL;Acc:F6HGM9]
Sequence	ATGAAAGCTCCACCAAATGGGTTTCTGGCAGGTTCTGGTGAAGGAGAAAGGAAGAGTATT AATTCTGAGTTGTGGCATGCTTGTGCGGGGCCCCTGGTTTCATTGCCTCCAGTTGGAAGT CTCGTGGTGTACTTCCCTCAAGGTCACAGTGAGCAAGTTGCTGCATCGATGCAAAAGGAG ACTGAATGCGTACCAAGTTATCCTAATCTTCCTTCCAAGTTGATTTGCATGCTTCATAAT GTCACATTACATGCTGATGCAGAAACTGATGAAGTTTATGCGCAGATGACCCTTCAGCCT GTAAGCAAATATGACAAGGAGGCATTGCTGGCATCTGATCTTGGCCTCAAGCAAAGCAGG CAACCAGTTGAGTTTTTCTGTAAAACTCTCACAGCTAGTGACACAAGCACCCATGGTGGA TTTTCTGTACCTCGTAGAGCAGCTGAGAAGATCTTTCCACCTCTTGATTTCTCGATGCAA CCCCCTGCTCAGGAGATTGTGGCCAGAGATTTACATGATAATACATGGACATTCAGACAT ATTTATCGAGGGCAACCAAAAAGGCACCTGCTGACTACAGGTTGGAGTGTCTTTGTTAGC ACAAAAAGATTGTTCGCTGGTGATTCTGTCCTTTTTATAAGAGATGAAAAATCACAGCTT CTCTTGGGTATAAGGCGTGCTAATAGGCAGCAGCCAGCTCTGTCTTCATCAGTCATATCC TGTGATAGCATGCATATAGGAATTCTAGCTGCTGCTGCTCATGCTGCTGCAAATAACAGT CCATTTACTATATTTTATAATCCAAGGGCTAGCCCTTCTGAGTTTGTGATTCCCTTAGCC AAATATAACAAAGCAATGTATACCCAAGTTTCACTTGGCATGCGATTTAGAATGATGTTT GAAACTGAGGAGTCAGGGGTACGCAGATACATGGGTACCATCACTGGCATCAGTGAACTT GATGCTGCGCGATGGAAAAATTCACAATGGCGCAACCTTCAGGTTGGCTGGGATGAATCA ACAGCTGGCGAACGGCCAAGCCGAGTTTCAATTTGGGAAATTGAACCTGTTGTAACTCCT TTCTATTTATGTCCTCCTCCATTTTTCAGACCCAAATTTCCCAAACAACCAGGATTTCCA GATGATGAGTCTGATATAGAGAGTGCTTTCAAGAGAGGCATGCCCTGGCTTGGGGATGAC TTTGGCATGAAGGATGCCCCGAGCTCAATCTTCCCAGGCTTGAATCTAGTCCAGTGGATG AGCATGCAACAGAATAATCAATTTCCAGCTTCTCAGTCAGGACTATTCCCTCCCATGGTT TCTTCAACTGTCCTGCACAGTAACCTTAGCACTGATGATCCGTCCAAATTGTTGAGTTTT CAAGCTCCTGCGTTGTCTGCACCAAGTCTCCAGTTCAATAAAGTAAATCAACAAAATCAA GTTAGCCAATTCCAGCAGCCATCTTTGGCATGGCCCCAGCAGCAGCAGCAGCAGCAGCAG CAGCAGCTACAGCAACTGTTGCAGACTCCTATTAATCCACAACAACACCCCCAGCAGCAT CAGCGCCAGCAGCAACAGCAGCCCCAGCAGCAGCATCAGCAGCAGCAACAACAACAACAA CATCAACAACATCCACAGCAGCAGCAGCAGCACCAACTGCAACAATTGCAACAACCACAG CTGCTGCTGCAGCAGCACCAACAGTTGCAACCGCAGCAGCAACAACAGCAACAACAGCAG CAACAACCACAACATCAGCAGCAGCAGCAGCAGCAGCCACCACCACACCAGCAGCAGCAT CAGCCACCACAGCAGCAGCAGCCGCTCCAACAGCTATTCCAACCAGCTTTTGTAAATGGT GGTGTTTCCTCAAATCAGATCCTTAATCAGAATTCACAGCAACCAATTTTATACCCTCAG CTTCAGCCACAACAGTCACTAACAGGCAATACCCTATCTCAACAAAGTATTCAGTCTGCT AGTAGGAATTCATTTCAGTTGTCATCTTTGCCACAAGACTTGCAGTTTCAGCAACAAATG GAACAGCAGCCTAGCCTTGTACAGAGGCATCAGCAGCCGCATACACAAATGCAACAATCA TCCCCACAGTTGTTGCAACATAGCTCGTCTCAGAGGCCACAACAGCCACAGCAACCACAA GTGCAACAATCCTCACAGCAGAACCTACCAGAGCATCAACTTCAGTTACAGTATCTGCAG AAATTGCAGCAGCAGCAGTTGCTTTCTCCGGTAAGCCCACGGTTACAGCCTCAGCAGCCA CAGCAACAGCAGGCAAATCAACAAAACCAGTCATTACAACATTTGTCTCTGTCTCAGCAG CAGCTAAGTAGCAATAGTTTCTCAACATCAGCGCTCATGCAATCACAACAAATTCCCATG AACCAACTCCAGGGCCAGCACAAACCAATTACAGCAATCAGAGCTCATTCTGGGCTTACA GATGGGGATGCTCCATCATGTTCAACCTCACCTTCTACTAATAATTGCCAGGTCCCATCA AATTTCCTCAATAGAAACCAACAAGGGCCAGCCATATTATTGGGGGATTCAGTGGTTGAG CCTGCTAGTAATCTTGTCCAAGAGCTTCAAAGCAAGTCTGATATCCGCATAAAAAATGAA GTACCCAGCTCAAAAGTACCAGACCAACTAAGATACAAAGGTACTGTTACTGATCAATTG GAAGCTTCTTCATCTGCGACGTCTTATTGCTTGGATGCTGGTACCCTCCAGCAGAATTTC ACACTCCCCACCTTCTGTTTGGATGGAGATGTTCAGTCAAATCCTCAGAGTAATCCTCCT TTTGCAGTTAATATTGATGGTTTGACACCTGACACTCTGTTGTCGAGGGGTTTTGACTCA GGAAAGGATCTTCAGAACTTGCTTTCTAATTATGGTGGAACTCCAAGAGATATTGAGACG GAGTTGTCTACTGCTGCGATTAGCTCTCAGTCATTTGGGGTTCCGAACATGTCTTTCAAG CCTGGGTGTTCAAATGATGTTGCCATCACAGAGACTGGGGTTTTGAGCAATGGGTTGTGG ACAAACCAGGCTCAGCGTATGCGGACATATACAAAGGTTCAAAAGCGTGGTTCTGTGGGG AGATCTATCGATGTCACTCGTTACAAAGGTTATGATGAGCTCAGGCATGATCTTGCCCGC ATGTTTGGAATTGAAGGGCAGCTAGAAGATCCACAAAGGACCGACTGGAAGCTTGTTTAT GTTGATCATGAGAATGACATACTACTTGTTGGTGATGACCCTTGGGAAGAGTTTGTAAGC TGTGTTCAGAGTATAAAGATACTGTCATCTGCTGAAGTACAGCAGATGAGTTTGGATGGA GATCTGGGTCACGTGCCTGTCCCAAATCAAGCTTGTAGTGGGACTGATAGTGGGAATGCA TGGAAGGGTCACTACGAGGATACCTCAGCTGCCTCATTTAATCGATGA

Peptide Sequence

PEP ID	VIT_11s0016g00640.t01
PEP Infomation	pep chromosome:12X:11:629393:640201:1 gene:VIT_11s0016g00640 transcript:VIT_11s0016g00640.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin response factor [Source:UniProtKB/TrEMBL;Acc:F6HGM9]
Sequence	MKAPPNGFLAGSGEGERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE TECVPSYPNLPSKLICMLHNVTLHADAETDEVYAQMTLQPVSKYDKEALLASDLGLKQSR QPVEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRH IYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVIS CDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMF ETEESGVRRYMGTITGISELDAARWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVVTP FYLCPPPFFRPKFPKQPGFPDDESDIESAFKRGMPWLGDDFGMKDAPSSIFPGLNLVQWM SMQQNNQFPASQSGLFPPMVSSTVLHSNLSTDDPSKLLSFQAPALSAPSLQFNKVNQQNQ VSQFQQPSLAWPQQQQQQQQQQLQQLLQTPINPQQHPQQHQRQQQQQPQQQHQQQQQQQQ HQQHPQQQQQHQLQQLQQPQLLLQQHQQLQPQQQQQQQQQQQPQHQQQQQQQPPPHQQQH QPPQQQQPLQQLFQPAFVNGGVSSNQILNQNSQQPILYPQLQPQQSLTGNTLSQQSIQSA SRNSFQLSSLPQDLQFQQQMEQQPSLVQRHQQPHTQMQQSSPQLLQHSSSQRPQQPQQPQ VQQSSQQNLPEHQLQLQYLQKLQQQQLLSPVSPRLQPQQPQQQQANQQNQSLQHLSLSQQ QLSSNSFSTSALMQSQQIPMNQLQGQHKPITAIRAHSGLTDGDAPSCSTSPSTNNCQVPS NFLNRNQQGPAILLGDSVVEPASNLVQELQSKSDIRIKNEVPSSKVPDQLRYKGTVTDQL EASSSATSYCLDAGTLQQNFTLPTFCLDGDVQSNPQSNPPFAVNIDGLTPDTLLSRGFDS GKDLQNLLSNYGGTPRDIETELSTAAISSQSFGVPNMSFKPGCSNDVAITETGVLSNGLW TNQAQRMRTYTKVQKRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVY VDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGHVPVPNQACSGTDSGNA WKGHYEDTSAASFNR

Transcript Sequence

Transcript ID	VIT_11s0016g00640.t01
Transcript Infomation	cdna chromosome:12X:11:629393:640201:1 gene:VIT_11s0016g00640 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin response factor [Source:UniProtKB/TrEMBL;Acc:F6HGM9]
Sequence	TGAAAACGGTGATCTTAGAGAGTTTCGGACATCTTGAATTCACTTCTGTATGTTGTTCCG ATAAGCTCAGTCGTAGGTTTGAATTTTTGGTTTTTTTTTTGGAGGAAAGTTGTTGCGTTT GGTTGCTTTGGTCAATGGTGAGAGGCGGAATCAGTGTTTGGTGTTTGTACGAAGATGAGG AATTGAGAGAAAGTTAGGGTTTGATGGTTGGAATCAATGTGAATTGCGTGCGATGCTGCA GCTGATGGTGAATGATGGTTTAGTGGTGGAAAACTAGGCCGAAGAGGAACGCCGAGTGGT GATTGAATTGAATTTGCTCAGAGGAATATTTTGGTATCTGTAAGCATGAAAGCTCCACCA AATGGGTTTCTGGCAGGTTCTGGTGAAGGAGAAAGGAAGAGTATTAATTCTGAGTTGTGG CATGCTTGTGCGGGGCCCCTGGTTTCATTGCCTCCAGTTGGAAGTCTCGTGGTGTACTTC CCTCAAGGTCACAGTGAGCAAGTTGCTGCATCGATGCAAAAGGAGACTGAATGCGTACCA AGTTATCCTAATCTTCCTTCCAAGTTGATTTGCATGCTTCATAATGTCACATTACATGCT GATGCAGAAACTGATGAAGTTTATGCGCAGATGACCCTTCAGCCTGTAAGCAAATATGAC AAGGAGGCATTGCTGGCATCTGATCTTGGCCTCAAGCAAAGCAGGCAACCAGTTGAGTTT TTCTGTAAAACTCTCACAGCTAGTGACACAAGCACCCATGGTGGATTTTCTGTACCTCGT AGAGCAGCTGAGAAGATCTTTCCACCTCTTGATTTCTCGATGCAACCCCCTGCTCAGGAG ATTGTGGCCAGAGATTTACATGATAATACATGGACATTCAGACATATTTATCGAGGGCAA CCAAAAAGGCACCTGCTGACTACAGGTTGGAGTGTCTTTGTTAGCACAAAAAGATTGTTC GCTGGTGATTCTGTCCTTTTTATAAGAGATGAAAAATCACAGCTTCTCTTGGGTATAAGG CGTGCTAATAGGCAGCAGCCAGCTCTGTCTTCATCAGTCATATCCTGTGATAGCATGCAT ATAGGAATTCTAGCTGCTGCTGCTCATGCTGCTGCAAATAACAGTCCATTTACTATATTT TATAATCCAAGGGCTAGCCCTTCTGAGTTTGTGATTCCCTTAGCCAAATATAACAAAGCA ATGTATACCCAAGTTTCACTTGGCATGCGATTTAGAATGATGTTTGAAACTGAGGAGTCA GGGGTACGCAGATACATGGGTACCATCACTGGCATCAGTGAACTTGATGCTGCGCGATGG AAAAATTCACAATGGCGCAACCTTCAGGTTGGCTGGGATGAATCAACAGCTGGCGAACGG CCAAGCCGAGTTTCAATTTGGGAAATTGAACCTGTTGTAACTCCTTTCTATTTATGTCCT CCTCCATTTTTCAGACCCAAATTTCCCAAACAACCAGGATTTCCAGATGATGAGTCTGAT ATAGAGAGTGCTTTCAAGAGAGGCATGCCCTGGCTTGGGGATGACTTTGGCATGAAGGAT GCCCCGAGCTCAATCTTCCCAGGCTTGAATCTAGTCCAGTGGATGAGCATGCAACAGAAT AATCAATTTCCAGCTTCTCAGTCAGGACTATTCCCTCCCATGGTTTCTTCAACTGTCCTG CACAGTAACCTTAGCACTGATGATCCGTCCAAATTGTTGAGTTTTCAAGCTCCTGCGTTG TCTGCACCAAGTCTCCAGTTCAATAAAGTAAATCAACAAAATCAAGTTAGCCAATTCCAG CAGCCATCTTTGGCATGGCCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTACAGCAA CTGTTGCAGACTCCTATTAATCCACAACAACACCCCCAGCAGCATCAGCGCCAGCAGCAA CAGCAGCCCCAGCAGCAGCATCAGCAGCAGCAACAACAACAACAACATCAACAACATCCA CAGCAGCAGCAGCAGCACCAACTGCAACAATTGCAACAACCACAGCTGCTGCTGCAGCAG CACCAACAGTTGCAACCGCAGCAGCAACAACAGCAACAACAGCAGCAACAACCACAACAT CAGCAGCAGCAGCAGCAGCAGCCACCACCACACCAGCAGCAGCATCAGCCACCACAGCAG CAGCAGCCGCTCCAACAGCTATTCCAACCAGCTTTTGTAAATGGTGGTGTTTCCTCAAAT CAGATCCTTAATCAGAATTCACAGCAACCAATTTTATACCCTCAGCTTCAGCCACAACAG TCACTAACAGGCAATACCCTATCTCAACAAAGTATTCAGTCTGCTAGTAGGAATTCATTT CAGTTGTCATCTTTGCCACAAGACTTGCAGTTTCAGCAACAAATGGAACAGCAGCCTAGC CTTGTACAGAGGCATCAGCAGCCGCATACACAAATGCAACAATCATCCCCACAGTTGTTG CAACATAGCTCGTCTCAGAGGCCACAACAGCCACAGCAACCACAAGTGCAACAATCCTCA CAGCAGAACCTACCAGAGCATCAACTTCAGTTACAGTATCTGCAGAAATTGCAGCAGCAG CAGTTGCTTTCTCCGGTAAGCCCACGGTTACAGCCTCAGCAGCCACAGCAACAGCAGGCA AATCAACAAAACCAGTCATTACAACATTTGTCTCTGTCTCAGCAGCAGCTAAGTAGCAAT AGTTTCTCAACATCAGCGCTCATGCAATCACAACAAATTCCCATGAACCAACTCCAGGGC CAGCACAAACCAATTACAGCAATCAGAGCTCATTCTGGGCTTACAGATGGGGATGCTCCA TCATGTTCAACCTCACCTTCTACTAATAATTGCCAGGTCCCATCAAATTTCCTCAATAGA AACCAACAAGGGCCAGCCATATTATTGGGGGATTCAGTGGTTGAGCCTGCTAGTAATCTT GTCCAAGAGCTTCAAAGCAAGTCTGATATCCGCATAAAAAATGAAGTACCCAGCTCAAAA GTACCAGACCAACTAAGATACAAAGGTACTGTTACTGATCAATTGGAAGCTTCTTCATCT GCGACGTCTTATTGCTTGGATGCTGGTACCCTCCAGCAGAATTTCACACTCCCCACCTTC TGTTTGGATGGAGATGTTCAGTCAAATCCTCAGAGTAATCCTCCTTTTGCAGTTAATATT GATGGTTTGACACCTGACACTCTGTTGTCGAGGGGTTTTGACTCAGGAAAGGATCTTCAG AACTTGCTTTCTAATTATGGTGGAACTCCAAGAGATATTGAGACGGAGTTGTCTACTGCT GCGATTAGCTCTCAGTCATTTGGGGTTCCGAACATGTCTTTCAAGCCTGGGTGTTCAAAT GATGTTGCCATCACAGAGACTGGGGTTTTGAGCAATGGGTTGTGGACAAACCAGGCTCAG CGTATGCGGACATATACAAAGGTTCAAAAGCGTGGTTCTGTGGGGAGATCTATCGATGTC ACTCGTTACAAAGGTTATGATGAGCTCAGGCATGATCTTGCCCGCATGTTTGGAATTGAA GGGCAGCTAGAAGATCCACAAAGGACCGACTGGAAGCTTGTTTATGTTGATCATGAGAAT GACATACTACTTGTTGGTGATGACCCTTGGGAAGAGTTTGTAAGCTGTGTTCAGAGTATA AAGATACTGTCATCTGCTGAAGTACAGCAGATGAGTTTGGATGGAGATCTGGGTCACGTG CCTGTCCCAAATCAAGCTTGTAGTGGGACTGATAGTGGGAATGCATGGAAGGGTCACTAC GAGGATACCTCAGCTGCCTCATTTAATCGATGAAAGTTACAAACTTCCTAACATCAAGAT AATTCATCATGCCTTTGGGTAGACTATCAGGTATCATCAAATTGGACGATGGATGCCCCG TCTGGTCGGTGCTTGTCAGTTCTACGAGCAATGTGAACTAGCTCTTCTTATGAGGTGATG TGTCCATAAACAGAGGGAAATGGAGTAGTAATTGGGGGGGGGGGCAGACTATTATAGTTT TTGCCACTCTTCACCTCTGCATACAAGTCCACCGATTCCCTGGTTGAGGAACTGAGCGCT TTTAAAAAACGCTAAGGCTTAGAGCTCGAATCATATAGTAGGGTGAAAAACTACAGCTTA TTCAAATTTTTTGATGCTGGCATCCGCATCTGCTTTTGTTGCAATTGGTTGCGCCTGTGC AATGGTATTTCAGAAAGAGCCAGCAGGGGCGGAAACAAAAGGCAGATGATGTATAATACA GTACTTTTCCTTCAGTTAAGGCTTAAAAGGACTGTCACTTGCAAAGAACCCTGTTTATAT GTTATGTTCTCGCTGTAACCATAACTACTAGG