Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g00600.t01
CDS Infomation

cds chromosome:12X:11:586791:595557:-1 gene:VIT_11s0016g00600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGCGTCTCCTCTCTGCACGTGGCTAGTGGCCGCTTGCATGTCGGTGACCGCCGAC
AATGAGTTTGCGCCGAAACCGTCGATGGTACAGTGTTCGAAGAGATTGAGCAGGTGGGGG
AAGAGGAGGAGGGTTTTGGCTCAATGCAGCGACTTCGCTCGAGGTGGGTCGATTTCGTCG
AGCATTCAGGGTCTGGTGAGCTCGTGTCTGGCTTTCGAGCCCTGCGACCAGTATTGTAGC
TCCAAGGGGCTTCCTTACTCGGCCTTTTTCGGTGACAATGCTCTCTCGTCGGTTTTCGGA
TCCAAGTCTCTTCCTCTGAATCGAAGGCAGAGGCGAACCAATCGAGGCTCTCATTCGGGG
GAAACCATGGCAGTGGCTGTGCAACCTGCAAAGGAGGTCACAACAAAGAAGAAACCTCTT
ACAGAACAGAGGCGAGTAGTTGTGACAGGGATGGGGGTCATGAGCCCAATTGGTCATGAA
CCAGACAGCTTCTACAACAATCTGCTTGAGGGTGTTAGTGGCATAAGTGAAATAGAGAGT
TTTGATTGTTCTCATTTTCCAACGAGAATTGCTGGCGAGATCAAGTCCTTCTCAACAGAT
GGATGGATTGCACCGAAACTTTCCAAAAGGATGGACAAGTTCATGCTATACATGCTCACT
GCCGGCAAGAAAGCCTTGGCGGATGGTGGAATTACAGAAGATGTAACTGATGAGTTGGAT
AAATCTAGATGTGGAGTTTTGATTGGCTCAGCAATGGGTGGCATCAAGGTTTTTAACGAT
GCCATAGAAGCTTTGAGGGTCTCATATAGGAAGATGAACCCTTTCTGTGTACCTTTTGCC
ACTACAAATATGGGCTCTGCCATGCTTGCAATGGATTTGGGGTGGATGGGCCCAAATTAT
TCAATATCTACTGCTTGTGCTACCAGCAACTTCTGTATATTGAACGCATCAAATCATATC
ATCAGGGGTGAAGCTGACATGATGCTTTGTGGTGGCTCAGATGCGGCAATCATACCTATT
GGTTTGGGAGGTTTTGTTGCTTGTAGAGCACTTTCACAGAGGAACAACGATCCTACCAAA
GCTTCACGTCCTTGGGATACTAACCGTGATGGATTTGTTATGGGAGAAGGAGCTGGGGTC
CTGCTTTTAGAAGAATTAGAGCATGCTAAGAAAAGAGGTGCAAAAATTTATGCAGAATTT
CTGGGTGGAAGCTTCACTTGTGATGCCTACCACATGACTGAGCCTCACCCTGATGGTGCT
GGTGTCATTCTCTGCATAGAAAGTGCCTTGGCTCGATCCGGGGTGTCCAGAGAAGATGTG
AATTACATAAATGCACATGCTACCTCCACACTTGCTGGAGACTTTAGAGAGTACCAAGCC
CTTGTTCGTTGTTTTGGCCAGAATCCTGAGTTAAAAGTGAACTCTACAAAATCTATGATT
GGTCACCTGCTAGGAGCAGCTGGTGCAGTGGAGGCCATTGCAACAATACAGGCCATACGG
ACAGGGTGGGTTCATCCAAATATCAACCTTGAGAGCCCGGAGGAGGGTGTGGATACGGAT
TTGCTAGTGGGCTCAAAGAAAGAAAGACTCGACATCAAGGTGGCATTGTCTAATTCATTT
GGGTTTGGCGGCCACAATTCATCAATCATATTTGCCCCTTACAAATAG

Peptide Sequence

PEP ID

VIT_11s0016g00600.t01
PEP Infomation

pep chromosome:12X:11:586791:595557:-1 gene:VIT_11s0016g00600 transcript:VIT_11s0016g00600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAASPLCTWLVAACMSVTADNEFAPKPSMVQCSKRLSRWGKRRRVLAQCSDFARGGSISS
SIQGLVSSCLAFEPCDQYCSSKGLPYSAFFGDNALSSVFGSKSLPLNRRQRRTNRGSHSG
ETMAVAVQPAKEVTTKKKPLTEQRRVVVTGMGVMSPIGHEPDSFYNNLLEGVSGISEIES
FDCSHFPTRIAGEIKSFSTDGWIAPKLSKRMDKFMLYMLTAGKKALADGGITEDVTDELD
KSRCGVLIGSAMGGIKVFNDAIEALRVSYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNY
SISTACATSNFCILNASNHIIRGEADMMLCGGSDAAIIPIGLGGFVACRALSQRNNDPTK
ASRPWDTNRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFLGGSFTCDAYHMTEPHPDGA
GVILCIESALARSGVSREDVNYINAHATSTLAGDFREYQALVRCFGQNPELKVNSTKSMI
GHLLGAAGAVEAIATIQAIRTGWVHPNINLESPEEGVDTDLLVGSKKERLDIKVALSNSF
GFGGHNSSIIFAPYK

Transcript Sequence

Transcript ID

VIT_11s0016g00600.t01
Transcript Infomation

cdna chromosome:12X:11:586791:595557:-1 gene:VIT_11s0016g00600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGCACTTGGCGCTGTCGTCTCTTGAGACGACTCAGATTGTTCCAAAACTTGGCTATCTG
AAACGGCTTCCACCGCAGGAGTTTCGATTCCATTTGGTGTGGTTTCTTCAGAGAAATGCA
CAGAGCCACATCATCGTCTTCTCCGTCAATGGAAGTGTAGATTCAGATTTGAGATTGAGA
TTTCACACCGACTTCACACCTCTCCATTGATCGGAAATTTTCTATTCCTCTTCACTGTTT
GTTTTGTTTCGTCTTAATCTCTTCTGTGTCTCTCCCATGGCGGCGTCTCCTCTCTGCACG
TGGCTAGTGGCCGCTTGCATGTCGGTGACCGCCGACAATGAGTTTGCGCCGAAACCGTCG
ATGGTACAGTGTTCGAAGAGATTGAGCAGGTGGGGGAAGAGGAGGAGGGTTTTGGCTCAA
TGCAGCGACTTCGCTCGAGGTGGGTCGATTTCGTCGAGCATTCAGGGTCTGGTGAGCTCG
TGTCTGGCTTTCGAGCCCTGCGACCAGTATTGTAGCTCCAAGGGGCTTCCTTACTCGGCC
TTTTTCGGTGACAATGCTCTCTCGTCGGTTTTCGGATCCAAGTCTCTTCCTCTGAATCGA
AGGCAGAGGCGAACCAATCGAGGCTCTCATTCGGGGGAAACCATGGCAGTGGCTGTGCAA
CCTGCAAAGGAGGTCACAACAAAGAAGAAACCTCTTACAGAACAGAGGCGAGTAGTTGTG
ACAGGGATGGGGGTCATGAGCCCAATTGGTCATGAACCAGACAGCTTCTACAACAATCTG
CTTGAGGGTGTTAGTGGCATAAGTGAAATAGAGAGTTTTGATTGTTCTCATTTTCCAACG
AGAATTGCTGGCGAGATCAAGTCCTTCTCAACAGATGGATGGATTGCACCGAAACTTTCC
AAAAGGATGGACAAGTTCATGCTATACATGCTCACTGCCGGCAAGAAAGCCTTGGCGGAT
GGTGGAATTACAGAAGATGTAACTGATGAGTTGGATAAATCTAGATGTGGAGTTTTGATT
GGCTCAGCAATGGGTGGCATCAAGGTTTTTAACGATGCCATAGAAGCTTTGAGGGTCTCA
TATAGGAAGATGAACCCTTTCTGTGTACCTTTTGCCACTACAAATATGGGCTCTGCCATG
CTTGCAATGGATTTGGGGTGGATGGGCCCAAATTATTCAATATCTACTGCTTGTGCTACC
AGCAACTTCTGTATATTGAACGCATCAAATCATATCATCAGGGGTGAAGCTGACATGATG
CTTTGTGGTGGCTCAGATGCGGCAATCATACCTATTGGTTTGGGAGGTTTTGTTGCTTGT
AGAGCACTTTCACAGAGGAACAACGATCCTACCAAAGCTTCACGTCCTTGGGATACTAAC
CGTGATGGATTTGTTATGGGAGAAGGAGCTGGGGTCCTGCTTTTAGAAGAATTAGAGCAT
GCTAAGAAAAGAGGTGCAAAAATTTATGCAGAATTTCTGGGTGGAAGCTTCACTTGTGAT
GCCTACCACATGACTGAGCCTCACCCTGATGGTGCTGGTGTCATTCTCTGCATAGAAAGT
GCCTTGGCTCGATCCGGGGTGTCCAGAGAAGATGTGAATTACATAAATGCACATGCTACC
TCCACACTTGCTGGAGACTTTAGAGAGTACCAAGCCCTTGTTCGTTGTTTTGGCCAGAAT
CCTGAGTTAAAAGTGAACTCTACAAAATCTATGATTGGTCACCTGCTAGGAGCAGCTGGT
GCAGTGGAGGCCATTGCAACAATACAGGCCATACGGACAGGGTGGGTTCATCCAAATATC
AACCTTGAGAGCCCGGAGGAGGGTGTGGATACGGATTTGCTAGTGGGCTCAAAGAAAGAA
AGACTCGACATCAAGGTGGCATTGTCTAATTCATTTGGGTTTGGCGGCCACAATTCATCA
ATCATATTTGCCCCTTACAAATAGACCTTGTGGCCTACTCTGAACTTGCTCACTTTAATG
AGGCCAAATGTATCTAGGTATGCAACCTTCTTTTGTTTTAGTTCCTGGGTACTGGAATAC
GAGATAGAAACCAAGCTCCAGGTGGAGTTGTTAACGCTGAAGCTTGTTTTTCCATTGCTA
CATGATCAGGAGAAAATTATAGGGTGTTGGGTTGAGAGTTATATCCAGGGTAGTTCCAGA
AAGAACTTTGTCCCGGACACTTTTGTCGTAGTAATAACTGATTATCAAATCTTCAGTTGA
TTGGCACTGATGGGTTGGTCACATCTTGCAGTTGCTGAGCACCCAGGGAACCTCCTCTGT
ATCTCATCTTTTGTTTGCCAGAAGGGAAGTTAAAAAATTCAGTGTTATAAGTCACTTTTT
GCTTCTGTTGCTATCAGCCAATATCCTTTTCCTCATAAAAATAGCTGTAATAGGGTTTCT
GCATGTGATCTAGTTGATATGAGCTGTTCACCCACCAGTTCTTGAGTTTGTTTGGAGTGA
TTGTGATTCTGTGAGGTCAGAACCACTTCCTCGTAAAAATTAGGTATTTAGTAATTTTTT
TAGAATTATTTTTGAAAATCTAGAGAACGATTCTAGGTCAATAATTTGATAGGTAATTCA
TTAAGATAATGTTTTGTTTTTTTTTGTTTTTGGGTATATAATGTAATTTAAAAAAAAAAA
CTTACAATGGTCCTCCTTATTTGTATTTTTGTTGGATTTATTTATTATAATCGAGTCCCT
TTTTCGAGTTTA