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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g00580.t01
CDS Infomation

cds chromosome:12X:11:571050:571850:1 gene:VIT_11s0016g00580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGTGAAGGTACTGGATTATCCGCTTGATGCTCTAGCCTTCAACTATGTCAGCTTC
GGATTCTTCGCCCTAGTTAATAATTTATGGACATGGGTAGCCGTCGTCACCGCCGCCGTC
AGTTTCTGGAGCATCAGAATCAGAGCCGCAGCTTCCGCCGGTGCTGTCTTATCGCCTCTC
AAGTCGGAACCACCAGAGCTTCACGATCGGGAAACAGACGCTTCGTCAGCTCCGTCGACA
TTGAAGGAGGACCCAGCTCCCTCGACGGTTCCCGCGGTTGTGGCCGCCGGAGGCGGAGGA
GTGACGAAAGGGAAGTTCACTGTGTATTACGAAAATGACCGGAAAAGCGACGGCGAGGTA
GCACTGGCCGGACCTTGGGCCGCCTCCGACTGTGACGTTGACGGAGACTGTGGAGAGTGG
AGCCAGTGGTGGGAGGGAGTGATGAAGACGAGAATGGGGGAGTTGGGGTGGTACAGTTGC
CAGGATCGGACGGTGCTGAATGGAAGCGTGGTGAGATTTTGGGACGGCCGTGGACGGAGA
CGTTCCGTCACAGGTGGACTTCTGTTGTAG

Peptide Sequence

PEP ID

VIT_11s0016g00580.t01
PEP Infomation

pep chromosome:12X:11:571050:571850:1 gene:VIT_11s0016g00580 transcript:VIT_11s0016g00580.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAVKVLDYPLDALAFNYVSFGFFALVNNLWTWVAVVTAAVSFWSIRIRAAASAGAVLSPL
KSEPPELHDRETDASSAPSTLKEDPAPSTVPAVVAAGGGGVTKGKFTVYYENDRKSDGEV
ALAGPWAASDCDVDGDCGEWSQWWEGVMKTRMGELGWYSCQDRTVLNGSVVRFWDGRGRR
RSVTGGLLL

Transcript Sequence

Transcript ID

VIT_11s0016g00580.t01
Transcript Infomation

cdna chromosome:12X:11:571050:571850:1 gene:VIT_11s0016g00580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TACATTTAGATCCCCTCTCTCCAATCAAATCTAGCGGTTTATATTCACTCCCCCTTGTCC
ATAAATTTCATTTGGCTGGTGGGCTGTTCCTAAACGCCGCAAAGCGATGGCTGTGAAGGT
ACTGGATTATCCGCTTGATGCTCTAGCCTTCAACTATGTCAGCTTCGGATTCTTCGCCCT
AGTTAATAATTTATGGACATGGGTAGCCGTCGTCACCGCCGCCGTCAGTTTCTGGAGCAT
CAGAATCAGAGCCGCAGCTTCCGCCGGTGCTGTCTTATCGCCTCTCAAGTCGGAACCACC
AGAGCTTCACGATCGGGAAACAGACGCTTCGTCAGCTCCGTCGACATTGAAGGAGGACCC
AGCTCCCTCGACGGTTCCCGCGGTTGTGGCCGCCGGAGGCGGAGGAGTGACGAAAGGGAA
GTTCACTGTGTATTACGAAAATGACCGGAAAAGCGACGGCGAGGTAGCACTGGCCGGACC
TTGGGCCGCCTCCGACTGTGACGTTGACGGAGACTGTGGAGAGTGGAGCCAGTGGTGGGA
GGGAGTGATGAAGACGAGAATGGGGGAGTTGGGGTGGTACAGTTGCCAGGATCGGACGGT
GCTGAATGGAAGCGTGGTGAGATTTTGGGACGGCCGTGGACGGAGACGTTCCGTCACAGG
TGGACTTCTGTTGTAGTTGTGGTGTATAATGTCGAAGACAATAAATTATTAAATTGTGTA
TATACCATGGTTGATGAAGGAATTAAAGTTGCAATTTTGCCGTCTTTCTTTTATCAAATA
AAAAACATATGTCATCATCAT