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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g00560.t01
CDS Infomation

cds chromosome:12X:11:552997:554795:1 gene:VIT_11s0016g00560 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxiredoxin Q [Source:UniProtKB/TrEMBL;Acc:D7TCA6]
Sequence

ATGGCTTCCCTCTTCCTCCCCAAGCATTCTCTTCCCTCTCTCCTCTCCACTCAAATTCCC
AAAACCCCATCTCTCCACTCCCTTCCACTTGTCTCCAAATCATCACATTCTCAATTTTAT
GGTCTCACCTTCTCTTCTTCGCCCTCTCTTCCACTTCCTTCTTCTTCCTCTCCAAAGAAG
GCTTCCATTTTTGCTAAGGTTTCCAAAGGCCAAGTGCCCCCACCCTTCACTTTGAAAGAC
CAGGATGGGAAGACCGTGAGCCTCTCCAAGTTCAAAGGGAAGCCTGTGGTGGTCTATTTC
TACCCTGCTGATGAAACTCCAGGATGCACCAAACAGGCATGTGCTTTCAGGGACTCTTAT
GAGAAATTCAAGAAAGCAGGAGCCCAGGTTGTGGGCATTAGTGGTGATGACCCATCATCA
CACAAGGCATTTGCAAAGAAATACAGACTTCCATTCACATTGCTGAGCGATGACGGAAAC
AAGGTGAGGAAAGATTGGGGAGTGCCGGCAGATCTGTTTGGAACATTGCCCGGGAGACAA
ACTTATGTTCTTGACAAGAAGGGAGTGGTTCAGCTCATCTACAATAATCAGTTCCAACCC
GAAAAGCATATCGATGAGACCTTGAAACTACTTCAAACCCTTTGA

Peptide Sequence

PEP ID

VIT_11s0016g00560.t01
PEP Infomation

pep chromosome:12X:11:552997:554795:1 gene:VIT_11s0016g00560 transcript:VIT_11s0016g00560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxiredoxin Q [Source:UniProtKB/TrEMBL;Acc:D7TCA6]
Sequence

MASLFLPKHSLPSLLSTQIPKTPSLHSLPLVSKSSHSQFYGLTFSSSPSLPLPSSSSPKK
ASIFAKVSKGQVPPPFTLKDQDGKTVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSY
EKFKKAGAQVVGISGDDPSSHKAFAKKYRLPFTLLSDDGNKVRKDWGVPADLFGTLPGRQ
TYVLDKKGVVQLIYNNQFQPEKHIDETLKLLQTL

Transcript Sequence

Transcript ID

VIT_11s0016g00560.t01
Transcript Infomation

cdna chromosome:12X:11:552997:554795:1 gene:VIT_11s0016g00560 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxiredoxin Q [Source:UniProtKB/TrEMBL;Acc:D7TCA6]
Sequence

AAGCAACCATTTTTTTACAGGTACTTTACCTTCCTCACTCTTAATGGCTTCCCTCTTCCT
CCCCAAGCATTCTCTTCCCTCTCTCCTCTCCACTCAAATTCCCAAAACCCCATCTCTCCA
CTCCCTTCCACTTGTCTCCAAATCATCACATTCTCAATTTTATGGTCTCACCTTCTCTTC
TTCGCCCTCTCTTCCACTTCCTTCTTCTTCCTCTCCAAAGAAGGCTTCCATTTTTGCTAA
GGTTTCCAAAGGCCAAGTGCCCCCACCCTTCACTTTGAAAGACCAGGATGGGAAGACCGT
GAGCCTCTCCAAGTTCAAAGGGAAGCCTGTGGTGGTCTATTTCTACCCTGCTGATGAAAC
TCCAGGATGCACCAAACAGGCATGTGCTTTCAGGGACTCTTATGAGAAATTCAAGAAAGC
AGGAGCCCAGGTTGTGGGCATTAGTGGTGATGACCCATCATCACACAAGGCATTTGCAAA
GAAATACAGACTTCCATTCACATTGCTGAGCGATGACGGAAACAAGGTGAGGAAAGATTG
GGGAGTGCCGGCAGATCTGTTTGGAACATTGCCCGGGAGACAAACTTATGTTCTTGACAA
GAAGGGAGTGGTTCAGCTCATCTACAATAATCAGTTCCAACCCGAAAAGCATATCGATGA
GACCTTGAAACTACTTCAAACCCTTTGAGCCTTTCTTATTGTAGCTTCTCTCCTTCCTTC
ATTTCTGATAATTTTTTCATTTTTATCCCTCCCCACCATGAGATTTGTCCTCTTGAAGTT
AATTTATATATAACTCTCTATTGAACTTGTACTCTGTCTCACAAGTAAATGAAACTAAAT
AAAACTTTCATTATATGGAA