Gene sequences

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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_11s0016g00510.t01
CDS Infomation	cds chromosome:12X:11:521906:524349:1 gene:VIT_11s0016g00510 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase [Source:UniProtKB/TrEMBL;Acc:F6HGM2]
Sequence	ATGCATTTGGGCGCTGTGACGACGCTGCTGCTGGCGTCGCAGTTCATGATTTTCATCCCA GCCGTCGTCTCCGACAAAACCAAGCACATTCCCTCCGATACCTCCAAGCTAGACGCCTGG ATCGCCACCAACATCCGGGAATACCGGCAGCGAATATGGGAGAGCAAAAAGGGCCTGCAC TCATCTCTCGATCCTATACTCGTCGCCGCCGAGGCAGAAGTGAATGTGATCAAGGTCAGA AAAGATGGCACCGGCGATTTCAAGACGATCACCGACGCTCTCAACAGCATCCCCAAGGGC AACCTCAAGCGCACCGTCATATGGATCGGCGGCGGCGAGTACTGGGAGAAGATCACCATT GATCGGTCCAAGCCGTTCATCACTTTGTACGGATCGACGGCTGATATGCCGTCGATAACG TACGACGGAACGGCGTTCAAGTACGGAACAGTCGACAGCGCCACCGTGGCGGTTGAGTCG GACTACTTCATGGCCGTTAATATTGCATTTGTGAATTCAGCTCCTATGCCAGACGGAAAA AGGGTGGGAGCTCAGGCAGTGGCCATGAGGATCTCCGGCGACAAAGCAGCATTCCACAAC TGCATGTTCATAGGGTTTCAAGACACCCTTTGTGACGACAGGGGCAGACATTTCTTCAAG GACTGCCAAATCCAGGGCACCGTTGATTTCATCTTTGGGGACGGCAAATCACTCTACTTG AACACAATGATACAATCAGTTGCAAAGGGCGTGGGCGTGATCACAGCTCAGGCAAGGGAA AACGTGGCTGATACCAGCGGATTCGCCTTCGTCCACTGCAACATATCCGGCAGCGGAGAC ACTTATCTCGGCCGAGCATGGAGGTTGAGGCCCAGAGTGGTGTTTGCTTACACCTACATG GGCACTCTCATCAACGGCGAAGGTTGGTCGGATAACTTGCATGCTGATCGTGACAAGACT GTATACTATGGGGAGTACATGTGCGAAGGACCAGGAGCAACCCCGTCTGGCCGAGTTAAA TTTGCGAAGTTACTGACTGGTGAAGAAGCAAAGCCCTTCTTGAGCATGACCTACATCAAT GGCAACAAGTGGCTTCTGCCACCTCCCAATTATGTGTAG

Peptide Sequence

PEP ID	VIT_11s0016g00510.t01
PEP Infomation	pep chromosome:12X:11:521906:524349:1 gene:VIT_11s0016g00510 transcript:VIT_11s0016g00510.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase [Source:UniProtKB/TrEMBL;Acc:F6HGM2]
Sequence	MHLGAVTTLLLASQFMIFIPAVVSDKTKHIPSDTSKLDAWIATNIREYRQRIWESKKGLH SSLDPILVAAEAEVNVIKVRKDGTGDFKTITDALNSIPKGNLKRTVIWIGGGEYWEKITI DRSKPFITLYGSTADMPSITYDGTAFKYGTVDSATVAVESDYFMAVNIAFVNSAPMPDGK RVGAQAVAMRISGDKAAFHNCMFIGFQDTLCDDRGRHFFKDCQIQGTVDFIFGDGKSLYL NTMIQSVAKGVGVITAQARENVADTSGFAFVHCNISGSGDTYLGRAWRLRPRVVFAYTYM GTLINGEGWSDNLHADRDKTVYYGEYMCEGPGATPSGRVKFAKLLTGEEAKPFLSMTYIN GNKWLLPPPNYV

Transcript Sequence

Transcript ID	VIT_11s0016g00510.t01
Transcript Infomation	cdna chromosome:12X:11:521906:524349:1 gene:VIT_11s0016g00510 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase [Source:UniProtKB/TrEMBL;Acc:F6HGM2]
Sequence	AAAATCACAGGCCCATTACGAAAAACACGACCAACTTCAAGCATCTTCTATGTCTCGCTT TATAAATCATATGTTCAATTCCACCACCAAAATTTTCCGATTTGATTCGCGGGAACCAAA CAGCAATGTGTATGCCTGAGAAAACGATGCATTTGGGCGCTGTGACGACGCTGCTGCTGG CGTCGCAGTTCATGATTTTCATCCCAGCCGTCGTCTCCGACAAAACCAAGCACATTCCCT CCGATACCTCCAAGCTAGACGCCTGGATCGCCACCAACATCCGGGAATACCGGCAGCGAA TATGGGAGAGCAAAAAGGGCCTGCACTCATCTCTCGATCCTATACTCGTCGCCGCCGAGG CAGAAGTGAATGTGATCAAGGTCAGAAAAGATGGCACCGGCGATTTCAAGACGATCACCG ACGCTCTCAACAGCATCCCCAAGGGCAACCTCAAGCGCACCGTCATATGGATCGGCGGCG GCGAGTACTGGGAGAAGATCACCATTGATCGGTCCAAGCCGTTCATCACTTTGTACGGAT CGACGGCTGATATGCCGTCGATAACGTACGACGGAACGGCGTTCAAGTACGGAACAGTCG ACAGCGCCACCGTGGCGGTTGAGTCGGACTACTTCATGGCCGTTAATATTGCATTTGTGA ATTCAGCTCCTATGCCAGACGGAAAAAGGGTGGGAGCTCAGGCAGTGGCCATGAGGATCT CCGGCGACAAAGCAGCATTCCACAACTGCATGTTCATAGGGTTTCAAGACACCCTTTGTG ACGACAGGGGCAGACATTTCTTCAAGGACTGCCAAATCCAGGGCACCGTTGATTTCATCT TTGGGGACGGCAAATCACTCTACTTGAACACAATGATACAATCAGTTGCAAAGGGCGTGG GCGTGATCACAGCTCAGGCAAGGGAAAACGTGGCTGATACCAGCGGATTCGCCTTCGTCC ACTGCAACATATCCGGCAGCGGAGACACTTATCTCGGCCGAGCATGGAGGTTGAGGCCCA GAGTGGTGTTTGCTTACACCTACATGGGCACTCTCATCAACGGCGAAGGTTGGTCGGATA ACTTGCATGCTGATCGTGACAAGACTGTATACTATGGGGAGTACATGTGCGAAGGACCAG GAGCAACCCCGTCTGGCCGAGTTAAATTTGCGAAGTTACTGACTGGTGAAGAAGCAAAGC CCTTCTTGAGCATGACCTACATCAATGGCAACAAGTGGCTTCTGCCACCTCCCAATTATG TGTAG