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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g00450.t01
CDS Infomation

cds chromosome:12X:11:443219:447330:-1 gene:VIT_11s0016g00450 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/TrEMBL;Acc:D7TC95]
Sequence

ATGGGAATTCCCAAACAGCAGCCGCAGCAGCAGTACACGGTGGAGCAACTACTCGCTCTC
AATCCCTACAATCCCGATATCCTTCCCGATCTTGAAAACTTCGTCAACGAGCAGGTGTCT
TCACAAACATACTCCTTGGATGCAAATCTTTGCCTTCTTCGCCTCTACCAATTTGAGCCA
GAGCGAATGAGTACCCAAATCGTTGCTCGGATTTTGGTGAAGGCCCTTATGGCAATGCCA
GCTCCAGATTTCAGCCTTTGTCTCTTTTTAATTCCAGAACGAGTGCAAATGGAGGAACAG
TTCAAGACTTTGATTGTTCTCTCACATTATTTGGAGACAGCAAGGTTCCGTCAGTTCTGG
GATGAAGCGGCTAAGAATCGACACATAGTTGAAGTTGTTCCAGGTTTTGAGCAAGCAATC
CAAGCCTATGCCATTCACGTTCTTTCCTTGACTTATCAAAAGGTTCCTAGGACTGTACTT
GCTGAGGCTATCAACATTGAAGGTCTATCTCTAGATAAATTCCTAGAGCATCAGGTAGCT
AACTGTGGTTGGGTTCTTGAGAAGAGTCAAGGCAAGGGCCAACTTATTGTCTTGCCTCCT
AACGAGTTCAACCATCCTGAACTGAAGAAAAACGCTGCAGATAGTATTCCTCTAGAGCAT
ATCACCCGAATCTTCCCCATTCTCGGCTGA

Peptide Sequence

PEP ID

VIT_11s0016g00450.t01
PEP Infomation

pep chromosome:12X:11:443219:447330:-1 gene:VIT_11s0016g00450 transcript:VIT_11s0016g00450.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/TrEMBL;Acc:D7TC95]
Sequence

MGIPKQQPQQQYTVEQLLALNPYNPDILPDLENFVNEQVSSQTYSLDANLCLLRLYQFEP
ERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETARFRQFW
DEAAKNRHIVEVVPGFEQAIQAYAIHVLSLTYQKVPRTVLAEAINIEGLSLDKFLEHQVA
NCGWVLEKSQGKGQLIVLPPNEFNHPELKKNAADSIPLEHITRIFPILG

Transcript Sequence

Transcript ID

VIT_11s0016g00450.t01
Transcript Infomation

cdna chromosome:12X:11:443219:447330:-1 gene:VIT_11s0016g00450 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/TrEMBL;Acc:D7TC95]
Sequence

CCATCGATCAGAAACCAGGGAGGAGACAGCAGTTCAAGAATGGGAATTCCCAAACAGCAG
CCGCAGCAGCAGTACACGGTGGAGCAACTACTCGCTCTCAATCCCTACAATCCCGATATC
CTTCCCGATCTTGAAAACTTCGTCAACGAGCAGGTGTCTTCACAAACATACTCCTTGGAT
GCAAATCTTTGCCTTCTTCGCCTCTACCAATTTGAGCCAGAGCGAATGAGTACCCAAATC
GTTGCTCGGATTTTGGTGAAGGCCCTTATGGCAATGCCAGCTCCAGATTTCAGCCTTTGT
CTCTTTTTAATTCCAGAACGAGTGCAAATGGAGGAACAGTTCAAGACTTTGATTGTTCTC
TCACATTATTTGGAGACAGCAAGGTTCCGTCAGTTCTGGGATGAAGCGGCTAAGAATCGA
CACATAGTTGAAGTTGTTCCAGGTTTTGAGCAAGCAATCCAAGCCTATGCCATTCACGTT
CTTTCCTTGACTTATCAAAAGGTTCCTAGGACTGTACTTGCTGAGGCTATCAACATTGAA
GGTCTATCTCTAGATAAATTCCTAGAGCATCAGGTAGCTAACTGTGGTTGGGTTCTTGAG
AAGAGTCAAGGCAAGGGCCAACTTATTGTCTTGCCTCCTAACGAGTTCAACCATCCTGAA
CTGAAGAAAAACGCTGCAGATAGTATTCCTCTAGAGCATATCACCCGAATCTTCCCCATT
CTCGGCTGACACCTCCCTTCGGAGGAGCTTGGAGACATCTGCTTTTCATATATTTGCAGC
TGAAGCTTGGGACATCACGATCAGCACAATATACCATCCTTTCACTCGTACACCACTTTA
GATGCTTCATTTTGAAGCAATTATGTAACTCTGGTCTTTGCTCTGGATTCATGAAGGGAG
AGTACCATTTAACATGGTCTCTTAACATTCCTGATAGCTCTGGTTTTAATTGTTTTATTG
ATGCTTGCTTTTATTGCGGCTTGGTAGCTCAA