Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g00420.t01
CDS Infomation

cds chromosome:12X:11:417287:423340:-1 gene:VIT_11s0016g00420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGTCGTCGAAGAGGAATCATAAAGAGAAGATAATTCGTCGAAAAGAAGAGAAACCA
GAAGAACCGGAGCTACCGAAGTATAGGGATCGTGCAAAGGAGCGGAGAGAGGATCAAAAT
CCGGATTACGAACCAACTGAACTCGGCTCTTTTCATGCGGTTGCTCCTCCTGGCACCGTC
GACCTTAGGTCAACTGACGCCAACAAGATATCCATCGAGCACAGCAAGTACCTCGGAGGG
GATGTGGAACACACGCATTTGGTCAAAGGCTTGGACTATGCTTTGCTTCATAAAGTGAGA
AGTGAGATTGAAAAGAAACCGGAAGTTGGAGATGATGCTGATGGAAAGTCCAGAGTATCC
AATGAGGACCAGCCATTGTCATTTCGCACTGCAACTGCAAAGTCAGTGTATCAGTGGATT
GTCAAGCCCCAAACTGTTGTCAAGTCAAACGAGATGTTCCTCCCTGGTAGAATGGCATTT
ATTTTTAGCATGGAGGGTGGATTTTCTAGTGACATTCCAACGACCCTGCATAGAAGTAAA
GCTGACTGTCCAGTGCCGGAGGAAATGGTTACTGTCGGCGTTGATGGTTCTGTGCTGGAC
CGAATTGCTAAAATCATGTCATATCTTCGCCTGGGATCATCTGGGAAGGTTCTCAAGAAG
AAGAAGAAGGAGAGAGATGTCAAAGGAAAGATATCAACTGTTGGTAATGAATTTGATGAA
GAGAAGAAGCCATCAAAGCTTGATGGTGGAATGTCAAAGAATCAAACCGAAAGGGAAAGC
CTGCCACCACCTTTACCTCCCAGGAAAAATTATGTTGATTCAAGAGAGAAACATGGTCCA
TCTGTTGCTAGATCTGAACAGGATGACATATTTGTTGGGGATGGTGTTGAATATGATATT
CCCAGTAAAGACATGAGTCAGAGCCCTGTCTCCGAGGACATGGAGGAGTCTCCTCGAAAC
AAGGAAAGAATTTCCTATCTCAGTGAACCTGCTTATGGTCCAGTTCCGCCCTCTGAGCCT
CAGGAATGGCAACAAACGAATGGATATGATGCTATGCAAGCACAAGCATTGGCTGCTGGC
TACCAGGGAGACTGGCAGGAGTACCAATATGCTGAGCAAATGGCTTATCCTGAACAATAT
CTCCAGCAGAACATGCAAACATATGATGTGCAGGCAGGTATGGGCATTCCTCAGGATCCA
CGCTTCATGACTCAAGAAGAGAAGGATCGGGGTTTGGGGTCCGTGTTCAAGCGGGATGAT
CAAAGGCTGCAGCAACTGAGGGAGAAAGATGCTCGAGAGAAGGATCCCAACTTCATATCA
GAAAGTTACTCTGAATGCTATCCTGGGTATCAGGAGTACAACCGTGAGGTTGTGGACAGT
GATGATGAAGATGACTTGTCAAAAATGGACATGGGTGGACGTGCTAAGGGTCGTCTACAT
CGGTGGGACTTTGAAACAGAGGAGGAATGGGCAACATATAACGAGCAGAAGGAAGCAATG
CCAAAAGCTGCATTCCAGTTTGGTGTGAAGATGCAAGATGGTAGAAAGACAAGAAAGCAA
AACAAGGACCAGAAGCTCACCAACGAGCTCCACAAGATCAACAAGATACTTGCCAGAAAG
AAAATGGAGAAGGGTGAGATGAATGATGATGGAGGCCGCTATGATGATGATTCACAACCT
GGGAAGAAGCTTCGGATATGA

Peptide Sequence

PEP ID

VIT_11s0016g00420.t01
PEP Infomation

pep chromosome:12X:11:417287:423340:-1 gene:VIT_11s0016g00420 transcript:VIT_11s0016g00420.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASSKRNHKEKIIRRKEEKPEEPELPKYRDRAKERREDQNPDYEPTELGSFHAVAPPGTV
DLRSTDANKISIEHSKYLGGDVEHTHLVKGLDYALLHKVRSEIEKKPEVGDDADGKSRVS
NEDQPLSFRTATAKSVYQWIVKPQTVVKSNEMFLPGRMAFIFSMEGGFSSDIPTTLHRSK
ADCPVPEEMVTVGVDGSVLDRIAKIMSYLRLGSSGKVLKKKKKERDVKGKISTVGNEFDE
EKKPSKLDGGMSKNQTERESLPPPLPPRKNYVDSREKHGPSVARSEQDDIFVGDGVEYDI
PSKDMSQSPVSEDMEESPRNKERISYLSEPAYGPVPPSEPQEWQQTNGYDAMQAQALAAG
YQGDWQEYQYAEQMAYPEQYLQQNMQTYDVQAGMGIPQDPRFMTQEEKDRGLGSVFKRDD
QRLQQLREKDAREKDPNFISESYSECYPGYQEYNREVVDSDDEDDLSKMDMGGRAKGRLH
RWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNELHKINKILARK
KMEKGEMNDDGGRYDDDSQPGKKLRI

Transcript Sequence

Transcript ID

VIT_11s0016g00420.t01
Transcript Infomation

cdna chromosome:12X:11:417287:423340:-1 gene:VIT_11s0016g00420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GATGGGTTCTCGAGGGGAATGGTAAGAGCCCTAGAGTGGGGAACCATAGAAATTATCATC
AATGGCGTCGTCGAAGAGGAATCATAAAGAGAAGATAATTCGTCGAAAAGAAGAGAAACC
AGAAGAACCGGAGCTACCGAAGTATAGGGATCGTGCAAAGGAGCGGAGAGAGGATCAAAA
TCCGGATTACGAACCAACTGAACTCGGCTCTTTTCATGCGGTTGCTCCTCCTGGCACCGT
CGACCTTAGGTCAACTGACGCCAACAAGATATCCATCGAGCACAGCAAGTACCTCGGAGG
GGATGTGGAACACACGCATTTGGTCAAAGGCTTGGACTATGCTTTGCTTCATAAAGTGAG
AAGTGAGATTGAAAAGAAACCGGAAGTTGGAGATGATGCTGATGGAAAGTCCAGAGTATC
CAATGAGGACCAGCCATTGTCATTTCGCACTGCAACTGCAAAGTCAGTGTATCAGTGGAT
TGTCAAGCCCCAAACTGTTGTCAAGTCAAACGAGATGTTCCTCCCTGGTAGAATGGCATT
TATTTTTAGCATGGAGGGTGGATTTTCTAGTGACATTCCAACGACCCTGCATAGAAGTAA
AGCTGACTGTCCAGTGCCGGAGGAAATGGTTACTGTCGGCGTTGATGGTTCTGTGCTGGA
CCGAATTGCTAAAATCATGTCATATCTTCGCCTGGGATCATCTGGGAAGGTTCTCAAGAA
GAAGAAGAAGGAGAGAGATGTCAAAGGAAAGATATCAACTGTTGGTAATGAATTTGATGA
AGAGAAGAAGCCATCAAAGCTTGATGGTGGAATGTCAAAGAATCAAACCGAAAGGGAAAG
CCTGCCACCACCTTTACCTCCCAGGAAAAATTATGTTGATTCAAGAGAGAAACATGGTCC
ATCTGTTGCTAGATCTGAACAGGATGACATATTTGTTGGGGATGGTGTTGAATATGATAT
TCCCAGTAAAGACATGAGTCAGAGCCCTGTCTCCGAGGACATGGAGGAGTCTCCTCGAAA
CAAGGAAAGAATTTCCTATCTCAGTGAACCTGCTTATGGTCCAGTTCCGCCCTCTGAGCC
TCAGGAATGGCAACAAACGAATGGATATGATGCTATGCAAGCACAAGCATTGGCTGCTGG
CTACCAGGGAGACTGGCAGGAGTACCAATATGCTGAGCAAATGGCTTATCCTGAACAATA
TCTCCAGCAGAACATGCAAACATATGATGTGCAGGCAGGTATGGGCATTCCTCAGGATCC
ACGCTTCATGACTCAAGAAGAGAAGGATCGGGGTTTGGGGTCCGTGTTCAAGCGGGATGA
TCAAAGGCTGCAGCAACTGAGGGAGAAAGATGCTCGAGAGAAGGATCCCAACTTCATATC
AGAAAGTTACTCTGAATGCTATCCTGGGTATCAGGAGTACAACCGTGAGGTTGTGGACAG
TGATGATGAAGATGACTTGTCAAAAATGGACATGGGTGGACGTGCTAAGGGTCGTCTACA
TCGGTGGGACTTTGAAACAGAGGAGGAATGGGCAACATATAACGAGCAGAAGGAAGCAAT
GCCAAAAGCTGCATTCCAGTTTGGTGTGAAGATGCAAGATGGTAGAAAGACAAGAAAGCA
AAACAAGGACCAGAAGCTCACCAACGAGCTCCACAAGATCAACAAGATACTTGCCAGAAA
GAAAATGGAGAAGGGTGAGATGAATGATGATGGAGGCCGCTATGATGATGATTCACAACC
TGGGAAGAAGCTTCGGATATGAAGCTTTTAGAAGAGTTGGTTGATGCAACTTTTGTACTA
TTTGTAGGATAATTTTTTTGTTGATCTGGAGCCTGTATTGCACTAAGTTTTTTAGGGCAA
AGGAAAGTGAAGTTTGTCATAAATTCTTGCTAAT