Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g00400.t01
CDS Infomation

cds chromosome:12X:11:407973:411961:-1 gene:VIT_11s0016g00400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTACGTCCCAGGGGAAAGTTTCATATTCTTCCCTTTCTAAGCTAGAGAAGGGAAAT
ACCAACTTGTACTATGATGATGACTTCAGTGATTCTGTCTGGGCTATGCCCCAGGGCTCA
AGGTCCTCCAAACAAGATTACTCCTACCAATACCCCCTCCAGTCCGAGGATTTTGTTGAT
GAGGAATGCGATTCAATTGAGGAGCCTTGTAACTCTACGCAGCAATATGGTATGCCTCCT
GAGGTGAACTTGAAAAATGTTTTGGGTGGGATATTTGCAATTTTGACTGGGCGGAATAAA
GGCATCGGTGATGCAGGAAGCCAGCAGTCCCCCACTTCAAATGTTTCATTTCTTGGGTCC
GGAAAGAATGGAGATAGTTTCTTGCATCCTTCGGTTTACATACCTAGTGCCCCACCACTT
CTGGAGCCAAGTGGGATTAACTATAGTGCTTACAAGGAAGTTTTGGATGCTGAACCCCCA
GAATGGGTTCCCGACAGTTCTACCACAGTTTGCATGCAGTGCACTGCCCCCTTCACAGCT
CTTACACGTGGAAGACATCATTGTCGGTTTTGTGGGGGGATATTCTGCAGAGCATGCACT
AAAGGAAGGTCTTTGCTGCCCGTTAAGTTCAGAGAGAGGAATCCACAAAGGGTGTGTGAT
GCCTGCTATGATAGGCTTGATCCTCTACAGAATATTCTAATTAATAGCATTAGCAATGCT
GCACAAGTTGCAAAGCATGATGTGATGGACTGGACATGTACACGAGGATGGCTGAATCTT
CCAGTTGGTTTGTCCATGGAACATGAGATATACAAGTCAGCTAATACATTGAGGAGCTAC
TACCAGGTTGCTAGATTGAACCCTGAGAGGTCCATTCCCTTAGCAGTTCTGAAAGGAGCC
AGAGGCTTGGCTATTATAACAGTTGCTAAAGCTGGCATGCTAGTTTCTTACAAACTTGGC
ACTGGTTTGGTTGTTGCCCGAAGGTCAGATGGATCATGGTCTGCACCATCTGCCATATTC
TCTGTCGGTTTAGGATGGGGTGCTCAGATTGGGGGTGAGCTCATGGACTTCATAATTGTG
CTTCATGGTTCCAAAGCTGTGAAGACATTTTGTAGTCGCATGCATTTTTCTCTTGGTGCT
GGTTGCAGTGCTGCTGCAGGACCTGTAGGAAGAGTGTTGGAAGCAGATCTCCGAGCTGGA
GATAGAGGTTCTGGCATGTGTTATACATACAGTTGTAGCAAAGGTGCATTTGTTGGAGTG
TCATTGGAAGGGAACATTGTTGCAACAAGGATGGATACAAACCTACGGTTCTATGGTGAT
CCTTACCTCACCACAGCCGACATTCTACTTGGGACAGTGGACAGACCAAAGGCTGCTGAG
CCCTTGTATACTGCCCTTAAAGACCTCTACTCCAAACTGCAGCATTAG

Peptide Sequence

PEP ID

VIT_11s0016g00400.t01
PEP Infomation

pep chromosome:12X:11:407973:411961:-1 gene:VIT_11s0016g00400 transcript:VIT_11s0016g00400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATSQGKVSYSSLSKLEKGNTNLYYDDDFSDSVWAMPQGSRSSKQDYSYQYPLQSEDFVD
EECDSIEEPCNSTQQYGMPPEVNLKNVLGGIFAILTGRNKGIGDAGSQQSPTSNVSFLGS
GKNGDSFLHPSVYIPSAPPLLEPSGINYSAYKEVLDAEPPEWVPDSSTTVCMQCTAPFTA
LTRGRHHCRFCGGIFCRACTKGRSLLPVKFRERNPQRVCDACYDRLDPLQNILINSISNA
AQVAKHDVMDWTCTRGWLNLPVGLSMEHEIYKSANTLRSYYQVARLNPERSIPLAVLKGA
RGLAIITVAKAGMLVSYKLGTGLVVARRSDGSWSAPSAIFSVGLGWGAQIGGELMDFIIV
LHGSKAVKTFCSRMHFSLGAGCSAAAGPVGRVLEADLRAGDRGSGMCYTYSCSKGAFVGV
SLEGNIVATRMDTNLRFYGDPYLTTADILLGTVDRPKAAEPLYTALKDLYSKLQH

Transcript Sequence

Transcript ID

VIT_11s0016g00400.t01
Transcript Infomation

cdna chromosome:12X:11:407973:411961:-1 gene:VIT_11s0016g00400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATTTGGAAGTTACCTTCATCCTCCTCTTCCCGTCTCCGTCTCGACTCAACCTCCTTTTC
TCAATCGAAAACCTAAGCTAATCCCTCAGGTAGAGAAGGCAGGGCGATTGAAGTTATCTT
GAAATCATTTGCAGGATTCACTATTTTATATTTGAGTAGGATAATCCTTTATTGGAATTT
ATCACACGCATGGCTACGTCCCAGGGGAAAGTTTCATATTCTTCCCTTTCTAAGCTAGAG
AAGGGAAATACCAACTTGTACTATGATGATGACTTCAGTGATTCTGTCTGGGCTATGCCC
CAGGGCTCAAGGTCCTCCAAACAAGATTACTCCTACCAATACCCCCTCCAGTCCGAGGAT
TTTGTTGATGAGGAATGCGATTCAATTGAGGAGCCTTGTAACTCTACGCAGCAATATGGT
ATGCCTCCTGAGGTGAACTTGAAAAATGTTTTGGGTGGGATATTTGCAATTTTGACTGGG
CGGAATAAAGGCATCGGTGATGCAGGAAGCCAGCAGTCCCCCACTTCAAATGTTTCATTT
CTTGGGTCCGGAAAGAATGGAGATAGTTTCTTGCATCCTTCGGTTTACATACCTAGTGCC
CCACCACTTCTGGAGCCAAGTGGGATTAACTATAGTGCTTACAAGGAAGTTTTGGATGCT
GAACCCCCAGAATGGGTTCCCGACAGTTCTACCACAGTTTGCATGCAGTGCACTGCCCCC
TTCACAGCTCTTACACGTGGAAGACATCATTGTCGGTTTTGTGGGGGGATATTCTGCAGA
GCATGCACTAAAGGAAGGTCTTTGCTGCCCGTTAAGTTCAGAGAGAGGAATCCACAAAGG
GTGTGTGATGCCTGCTATGATAGGCTTGATCCTCTACAGAATATTCTAATTAATAGCATT
AGCAATGCTGCACAAGTTGCAAAGCATGATGTGATGGACTGGACATGTACACGAGGATGG
CTGAATCTTCCAGTTGGTTTGTCCATGGAACATGAGATATACAAGTCAGCTAATACATTG
AGGAGCTACTACCAGGTTGCTAGATTGAACCCTGAGAGGTCCATTCCCTTAGCAGTTCTG
AAAGGAGCCAGAGGCTTGGCTATTATAACAGTTGCTAAAGCTGGCATGCTAGTTTCTTAC
AAACTTGGCACTGGTTTGGTTGTTGCCCGAAGGTCAGATGGATCATGGTCTGCACCATCT
GCCATATTCTCTGTCGGTTTAGGATGGGGTGCTCAGATTGGGGGTGAGCTCATGGACTTC
ATAATTGTGCTTCATGGTTCCAAAGCTGTGAAGACATTTTGTAGTCGCATGCATTTTTCT
CTTGGTGCTGGTTGCAGTGCTGCTGCAGGACCTGTAGGAAGAGTGTTGGAAGCAGATCTC
CGAGCTGGAGATAGAGGTTCTGGCATGTGTTATACATACAGTTGTAGCAAAGGTGCATTT
GTTGGAGTGTCATTGGAAGGGAACATTGTTGCAACAAGGATGGATACAAACCTACGGTTC
TATGGTGATCCTTACCTCACCACAGCCGACATTCTACTTGGGACAGTGGACAGACCAAAG
GCTGCTGAGCCCTTGTATACTGCCCTTAAAGACCTCTACTCCAAACTGCAGCATTAGACT
CAGCTCCCTTTGCATATACCATCTCCTTGCTGCCCTTGGAAGTTTCCTTGATTCTTGAAT
ATATCTCCATGGATGAACTGGCTGGTGTGAGTCTGTTAAGAATCAAGGGGGTTCTTGATT
CTCATGAAATCAATTCCTTGGCCTTGATGTGAAATTATAAAATCCCTCGGCCACCTTGGT
TTATATTTTATGTTTCACAAAGGAAAAATAGGATGCACACCACAGACAGCTCTTAAGTAT
AAATCTATTTCTTCTTTTATTCTGTGTCATGGTATGTAGTGGAGACTGGAGACTGGCTGA
CTGCACCGTGGATATGTGAATTGAAAGTGTTACATATACCTGTATATAAACTAATGGTGT
ACATGTTTTTATTTGACTTATGAATGGTGGATCATTTAGAGCTTAAAATA