Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g00380.t01
CDS Infomation

cds chromosome:12X:11:396641:400909:-1 gene:VIT_11s0016g00380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATGAGTATCTGGATCACTTGTTTTCATCCACATCATGGTCAGATGTGAATGTGAAG
GAGGGATCATCTTGGATTTGTGGTGAGCCTAGCCAAACAAATGGGATGCTTTCAGATTCA
ATTGGAATATATGAAGGTGATAAAAAAAACTCACCTGTTGGCATGACTAATTCAAACCTT
ATGATCGAGGGCTTGGTTACTCAAGATACTTCATCTATTGTTCTTGGTGGAGAGTCTGAT
CATGGTCTTGGCAAGGGCTTACTTTTGGAAGAAGCTCCACGGCAGCAAGACCTTCAAAAC
ACTGAAGGCAATTCCTCCTTGAATGGAGCAGTGAATGGCAGCTCAGAAGTTGGATACGTG
GGCCTGCAACTAAATACTCCTACTTCAACCCCATGCTCACTGGATCTTGGCTCTCCCAAG
CAGCTTTCGCTGATTGGTGGCATGTCTAGGTCATCTCGTCCTTTCACTGAGCTGGATCAT
GTTGGGTGCAATGGTAATGAGCCATCTGATTTTCAGAGATCAGTTGGAAATTTTCAAGCA
TTGCCTCCAATTCCACAGTTGTGGTCTCAACCATCTTACGGGGGTGGTTCCTCCTTGTCT
CCTGTTATGGGAGAATACAAGATGCAGGGCTTTGGTCTGCAAGGAGAATATGTGGATAAT
GAAATGGATATCATGAGGAACAGATACGTTGGGGATGAAATTCTGCAACTTGATAACATT
TCTTCAGCAATCCCCATAAAGGGGAAAGAAGAGCAGCACACTCATCCTTTCTCTCCTTCT
GCGGTTGGGCCCCACATGACAATGACAGCATCTGGATTACAGTCTTTGCCACAGACTACG
GTAGGTACTGCTTCTGGTGGCTGTAATGGAACTGGAAAGCCGCGTGTAAGGGCTCGTCGA
GGCCAGGCCACTGATCCTCACAGTATTGCTGAAAGGCTTCGGAGAGAGAAAATTGCTGAA
AGGATGAAGAACCTGCAAGAACTTGTTCCCAATTCCAATAAGACGGACAAAGCATCTATG
CTCGACGAAATCATTGAGTACGTCAAATTTCTTCAGCTCCAGGTCAAGGTACTAAGCATG
AGTAGGCTGGGGGCAGCAGAGGCAGTTGTTCCTCTCATCACAGATGGCCAAGCTGAGGGC
TCTAAGGGTCTGTCACTTTCACCCTCGGCTGGTCAAGCTGAAGATATTTGTCAATCTCCT
GATCAAATTGCCTTTGAGCAAGAAGTAGTGAAGTTGATGGAGTCCAACGTGACCATGGCC
ATGCAATATCTTCAAAGCAAAGGTCTCTGCCTTATGCCAATTGCTCTTGCTACAGCCATA
TCCAGTGGAAAGGCAGCATCATCAGGTACTGGGTCCGATGAGGGAAAGAACGGTTTGATT
GGTGGATTCATTCCCAATAATAACAGTAGCAGCAACACCAGTAGCAGCAACACCAGTAGC
AACAGCTTACCTGGCATTGGGACACATCATACATCTTCTGATGGCAATGTTCTGATTGGA
AAACTCAGCAGAGAAGGCATCACCACCAGTAGTTGCAATGGGGCTATTAACAAACAAGAA
GAGTTGAAGAGCACCTCATGCACTGCAAGAGAACTGAAAGCCAAAACTTAA

Peptide Sequence

PEP ID

VIT_11s0016g00380.t01
PEP Infomation

pep chromosome:12X:11:396641:400909:-1 gene:VIT_11s0016g00380 transcript:VIT_11s0016g00380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDEYLDHLFSSTSWSDVNVKEGSSWICGEPSQTNGMLSDSIGIYEGDKKNSPVGMTNSNL
MIEGLVTQDTSSIVLGGESDHGLGKGLLLEEAPRQQDLQNTEGNSSLNGAVNGSSEVGYV
GLQLNTPTSTPCSLDLGSPKQLSLIGGMSRSSRPFTELDHVGCNGNEPSDFQRSVGNFQA
LPPIPQLWSQPSYGGGSSLSPVMGEYKMQGFGLQGEYVDNEMDIMRNRYVGDEILQLDNI
SSAIPIKGKEEQHTHPFSPSAVGPHMTMTASGLQSLPQTTVGTASGGCNGTGKPRVRARR
GQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQLQVKVLSM
SRLGAAEAVVPLITDGQAEGSKGLSLSPSAGQAEDICQSPDQIAFEQEVVKLMESNVTMA
MQYLQSKGLCLMPIALATAISSGKAASSGTGSDEGKNGLIGGFIPNNNSSSNTSSSNTSS
NSLPGIGTHHTSSDGNVLIGKLSREGITTSSCNGAINKQEELKSTSCTARELKAKT

Transcript Sequence

Transcript ID

VIT_11s0016g00380.t01
Transcript Infomation

cdna chromosome:12X:11:396641:400909:-1 gene:VIT_11s0016g00380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTAGGTAGTGGCAGAGAGGATATGAGCGGAGGTGATTATCTTGCAACTGCAGTGCAGCAT
AGATATTTGGACATATACCTTTACAGTTGGTACTGGCTCTGAAAAAAAAAGAAGAAAGAA
AAGCAATTCTGTGGAGCTTTTGCTTTTGCAAGATTCAGCTCAGGGATTTCACATTGCACA
GCGTTTTATAATGGATGAGTATCTGGATCACTTGTTTTCATCCACATCATGGTCAGATGT
GAATGTGAAGGAGGGATCATCTTGGATTTGTGGTGAGCCTAGCCAAACAAATGGGATGCT
TTCAGATTCAATTGGAATATATGAAGGTGATAAAAAAAACTCACCTGTTGGCATGACTAA
TTCAAACCTTATGATCGAGGGCTTGGTTACTCAAGATACTTCATCTATTGTTCTTGGTGG
AGAGTCTGATCATGGTCTTGGCAAGGGCTTACTTTTGGAAGAAGCTCCACGGCAGCAAGA
CCTTCAAAACACTGAAGGCAATTCCTCCTTGAATGGAGCAGTGAATGGCAGCTCAGAAGT
TGGATACGTGGGCCTGCAACTAAATACTCCTACTTCAACCCCATGCTCACTGGATCTTGG
CTCTCCCAAGCAGCTTTCGCTGATTGGTGGCATGTCTAGGTCATCTCGTCCTTTCACTGA
GCTGGATCATGTTGGGTGCAATGGTAATGAGCCATCTGATTTTCAGAGATCAGTTGGAAA
TTTTCAAGCATTGCCTCCAATTCCACAGTTGTGGTCTCAACCATCTTACGGGGGTGGTTC
CTCCTTGTCTCCTGTTATGGGAGAATACAAGATGCAGGGCTTTGGTCTGCAAGGAGAATA
TGTGGATAATGAAATGGATATCATGAGGAACAGATACGTTGGGGATGAAATTCTGCAACT
TGATAACATTTCTTCAGCAATCCCCATAAAGGGGAAAGAAGAGCAGCACACTCATCCTTT
CTCTCCTTCTGCGGTTGGGCCCCACATGACAATGACAGCATCTGGATTACAGTCTTTGCC
ACAGACTACGGTAGGTACTGCTTCTGGTGGCTGTAATGGAACTGGAAAGCCGCGTGTAAG
GGCTCGTCGAGGCCAGGCCACTGATCCTCACAGTATTGCTGAAAGGCTTCGGAGAGAGAA
AATTGCTGAAAGGATGAAGAACCTGCAAGAACTTGTTCCCAATTCCAATAAGACGGACAA
AGCATCTATGCTCGACGAAATCATTGAGTACGTCAAATTTCTTCAGCTCCAGGTCAAGGT
ACTAAGCATGAGTAGGCTGGGGGCAGCAGAGGCAGTTGTTCCTCTCATCACAGATGGCCA
AGCTGAGGGCTCTAAGGGTCTGTCACTTTCACCCTCGGCTGGTCAAGCTGAAGATATTTG
TCAATCTCCTGATCAAATTGCCTTTGAGCAAGAAGTAGTGAAGTTGATGGAGTCCAACGT
GACCATGGCCATGCAATATCTTCAAAGCAAAGGTCTCTGCCTTATGCCAATTGCTCTTGC
TACAGCCATATCCAGTGGAAAGGCAGCATCATCAGGTACTGGGTCCGATGAGGGAAAGAA
CGGTTTGATTGGTGGATTCATTCCCAATAATAACAGTAGCAGCAACACCAGTAGCAGCAA
CACCAGTAGCAACAGCTTACCTGGCATTGGGACACATCATACATCTTCTGATGGCAATGT
TCTGATTGGAAAACTCAGCAGAGAAGGCATCACCACCAGTAGTTGCAATGGGGCTATTAA
CAAACAAGAAGAGTTGAAGAGCACCTCATGCACTGCAAGAGAACTGAAAGCCAAAACTTA
AACTCTGGTTTGACCTTCATTTCTGATTCCAGTTCAGAACTCAACTCTGGTTTGAACTTC
ATTTGTGATTCAATTTCTCGTTTTTTGCCTTAGGCTGGTAGTTCCAGAATTTAGGATTAG
TAAATACTATCTGAGTGGGTCTGTCTTTAACAGTAGTGGGATTTGGTTGTGTTTTGTATA
G