Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g00350.t01
CDS Infomation

cds chromosome:12X:11:348742:372949:1 gene:VIT_11s0016g00350 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCACCAAGCCTGCTTCTGCTACTCTCCCTAAGTCTGCTGCAATTTCCAAAGGCTAC
AATTTCGCTTCTACTTGGGAACAGAATGCTCCATTGACTGAGCAGCAACAAGCAGCTATA
GCAACATTATCTCATGCGGTTGCTGAGCGACCTTTTCCAGCCAATTTGTCCCATGAGCAT
ATCTCAGGGCGGGAGAATGGTTTGTCCGTTAACACTAAGGATAACACTTGGGAAGATTCT
GGAGCTATAGAGACAGTTTTAGTCAACACAAATCAGTTCTATAAGTGGTTTACTGATCTT
GAATCAGCCATGAAGTCAGAGACAGAGGAGAAGTACCGCCACTACGTAAACACATTAACA
GAGCGCATACAAACATGTGATGATATACTTCATCAGGTGGATGCTACCCTTGACTTATTT
AATGAACTACAACTGCAGCACCAAGCAGTAGCAACAAAGACTAAAACTCTTCATGATGCT
TGTGACCGATTGCTAGTAGAGAAACAAAGACTGATTGAGTTTGCAGAAGCACTTCGCAGC
AAACTCAACTACTTTGACGAGTTGGAGAATGTTGCTACCAGTTTTTATTCTCCAAACATG
AATGTTGGCAATGAGAACTTTCTACCTCTGCTTAAACGGCTTGATGAGTGCATATCGTAT
GTTGAGAGCAATCCACAGTATGCAGAATCAAGTGTTTACTTGGTCAAGTTCAGACAACTC
CAGTCTCGAGCTTTGGGTATGATTCGCTCTCATGTAGTTTCTGTTCTCAAAAGTGCTTCT
TCTCAGGTACAGGCAGCAATTCGGAGCAGTGGAGGCAGCAAAGCAGCTGTTTCCGAGAGT
GTAGAGGCATCTGTCATTTATGTCCGCTTCAAGGCAGCAGCAAGTGAGCTAAAGCCGTTG
TTGGAAGACATCGAAAGCAGATCATCAAGGAAAGAATATGTTCAGATTCTTTCAGAATGC
CACAGACTGTATTGTGAACAGCGGTTTTCCTTGATAAGAGGCATCGTGCATCAACGGATC
TCTGAGTTTGCCAAGAAAGAGGCCTTGCCATCATTGACTAGATCTGGATGTGCATACCTA
ATGCAGGTCTGTCAACTTGAGCACCAGCTCTTTGATCATTTTTTCCCTTCTTCTTCCGAG
GATATTTCAAATTTAGCTCCATTAATAGATCCTCTGTGTACTTATTTGTATGATACACTT
CGCCCAAAACTTATTCATGAAACAAATCTTGATTTTCTTTGCGAACTCATTGATATCCTT
AAAGTTGAAGTTTTAGGAGAACAGATCAGTAGACGGGGTGAATCATTAGCTGGATTACGC
CCCACATTGCATAGAATTCTAGCCGATGTTCATGAGCGATTGACTTTTCGTGCTCGAACA
CATATTCGTGATGAGATTGCAAATTATCTTCCTTCTGAAGACGACTTGGATTACCCTGCA
AAGCTGGAGCAATCTGCTGAGTCAAAATCAGGAACTACTTCTGCTGATGAAAACCCAGAT
GTATTTAAAACTTGGTACCCCCCACTGGAGAAAACCTTGTCTTGCCTGTCGAAGTTGTAT
CGTTGTCTGGAACCAGCAGTTTTCACTGGTTTAGCCCAGGAGGCAGTGGAAGTTTGCTCG
CTATCTATCCAAAAAGCAAGCAAACTCGTTGTAAAGAGATCATCACCAATGGATGGACAG
CTTTTCCTTATAAAGCATCTTCTTATTTTAAGGGAGCAGATTGCTCCATTTGATATAGAA
TTTTCAGTCACACACAAAGAACTTGATTTCTCTCATTTACTGGAGCATCTAAGACGCATA
CTTAGGGGTCAAGCCTCACTATTCGACTGGTCAAGATCAACCTCATTGGCAAGGACCTTA
TCACCTCGAGTTTTGGAAAGTCAAATAGATGCCAAGAAGGAACTGGAGAAAAGCCTCAAA
GCCACTTGTGAGGAGTTTATTATGTCGGTCACTAAGCTAGTTGTGGATCCCATGCTTTCA
TTTGTTACTAAGGTAACAGCTGTCAAAGTTGCATTATCATCGGGCAGTCAGAATCAAAAG
CTAGACTCAGTTATGGCAAAACCACTCAAGGATCAAGCTTTTGCTACTCCTGATAAGGTG
GCCGAACTTGTTCAGAAGGTAAGTGCTTCCTTACAGCAAGAGTTGCCGAAGGTGATGGAA
AAAATGAAGCTTTATCTGCAGAACCCATCAACAAGAACAATTCTTTTCAAGCCAATAAAG
ACAAATATTGTGGAAGCCCATATTCAAGTACAATCCCTGCTGAAATCAGAATATACCCCT
GAAGAGGTACAGAGCACCATCAATATGGTGTCAATCCAAGATCTGCAAGCACAACTCGAC
CACCTCCTGTAG

Peptide Sequence

PEP ID

VIT_11s0016g00350.t01
PEP Infomation

pep chromosome:12X:11:348742:372949:1 gene:VIT_11s0016g00350 transcript:VIT_11s0016g00350.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATKPASATLPKSAAISKGYNFASTWEQNAPLTEQQQAAIATLSHAVAERPFPANLSHEH
ISGRENGLSVNTKDNTWEDSGAIETVLVNTNQFYKWFTDLESAMKSETEEKYRHYVNTLT
ERIQTCDDILHQVDATLDLFNELQLQHQAVATKTKTLHDACDRLLVEKQRLIEFAEALRS
KLNYFDELENVATSFYSPNMNVGNENFLPLLKRLDECISYVESNPQYAESSVYLVKFRQL
QSRALGMIRSHVVSVLKSASSQVQAAIRSSGGSKAAVSESVEASVIYVRFKAAASELKPL
LEDIESRSSRKEYVQILSECHRLYCEQRFSLIRGIVHQRISEFAKKEALPSLTRSGCAYL
MQVCQLEHQLFDHFFPSSSEDISNLAPLIDPLCTYLYDTLRPKLIHETNLDFLCELIDIL
KVEVLGEQISRRGESLAGLRPTLHRILADVHERLTFRARTHIRDEIANYLPSEDDLDYPA
KLEQSAESKSGTTSADENPDVFKTWYPPLEKTLSCLSKLYRCLEPAVFTGLAQEAVEVCS
LSIQKASKLVVKRSSPMDGQLFLIKHLLILREQIAPFDIEFSVTHKELDFSHLLEHLRRI
LRGQASLFDWSRSTSLARTLSPRVLESQIDAKKELEKSLKATCEEFIMSVTKLVVDPMLS
FVTKVTAVKVALSSGSQNQKLDSVMAKPLKDQAFATPDKVAELVQKVSASLQQELPKVME
KMKLYLQNPSTRTILFKPIKTNIVEAHIQVQSLLKSEYTPEEVQSTINMVSIQDLQAQLD
HLL

Transcript Sequence

Transcript ID

VIT_11s0016g00350.t01
Transcript Infomation

cdna chromosome:12X:11:348742:372949:1 gene:VIT_11s0016g00350 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTGAGGCGGTGGTGATTCTCTCCTGGTTCCTCATGGCCACCAAGCCTGCTTCTGCTACTC
TCCCTAAGTCTGCTGCAATTTCCAAAGGCTACAATTTCGCTTCTACTTGGGAACAGAATG
CTCCATTGACTGAGCAGCAACAAGCAGCTATAGCAACATTATCTCATGCGGTTGCTGAGC
GACCTTTTCCAGCCAATTTGTCCCATGAGCATATCTCAGGGCGGGAGAATGGTTTGTCCG
TTAACACTAAGGATAACACTTGGGAAGATTCTGGAGCTATAGAGACAGTTTTAGTCAACA
CAAATCAGTTCTATAAGTGGTTTACTGATCTTGAATCAGCCATGAAGTCAGAGACAGAGG
AGAAGTACCGCCACTACGTAAACACATTAACAGAGCGCATACAAACATGTGATGATATAC
TTCATCAGGTGGATGCTACCCTTGACTTATTTAATGAACTACAACTGCAGCACCAAGCAG
TAGCAACAAAGACTAAAACTCTTCATGATGCTTGTGACCGATTGCTAGTAGAGAAACAAA
GACTGATTGAGTTTGCAGAAGCACTTCGCAGCAAACTCAACTACTTTGACGAGTTGGAGA
ATGTTGCTACCAGTTTTTATTCTCCAAACATGAATGTTGGCAATGAGAACTTTCTACCTC
TGCTTAAACGGCTTGATGAGTGCATATCGTATGTTGAGAGCAATCCACAGTATGCAGAAT
CAAGTGTTTACTTGGTCAAGTTCAGACAACTCCAGTCTCGAGCTTTGGGTATGATTCGCT
CTCATGTAGTTTCTGTTCTCAAAAGTGCTTCTTCTCAGGTACAGGCAGCAATTCGGAGCA
GTGGAGGCAGCAAAGCAGCTGTTTCCGAGAGTGTAGAGGCATCTGTCATTTATGTCCGCT
TCAAGGCAGCAGCAAGTGAGCTAAAGCCGTTGTTGGAAGACATCGAAAGCAGATCATCAA
GGAAAGAATATGTTCAGATTCTTTCAGAATGCCACAGACTGTATTGTGAACAGCGGTTTT
CCTTGATAAGAGGCATCGTGCATCAACGGATCTCTGAGTTTGCCAAGAAAGAGGCCTTGC
CATCATTGACTAGATCTGGATGTGCATACCTAATGCAGGTCTGTCAACTTGAGCACCAGC
TCTTTGATCATTTTTTCCCTTCTTCTTCCGAGGATATTTCAAATTTAGCTCCATTAATAG
ATCCTCTGTGTACTTATTTGTATGATACACTTCGCCCAAAACTTATTCATGAAACAAATC
TTGATTTTCTTTGCGAACTCATTGATATCCTTAAAGTTGAAGTTTTAGGAGAACAGATCA
GTAGACGGGGTGAATCATTAGCTGGATTACGCCCCACATTGCATAGAATTCTAGCCGATG
TTCATGAGCGATTGACTTTTCGTGCTCGAACACATATTCGTGATGAGATTGCAAATTATC
TTCCTTCTGAAGACGACTTGGATTACCCTGCAAAGCTGGAGCAATCTGCTGAGTCAAAAT
CAGGAACTACTTCTGCTGATGAAAACCCAGATGTATTTAAAACTTGGTACCCCCCACTGG
AGAAAACCTTGTCTTGCCTGTCGAAGTTGTATCGTTGTCTGGAACCAGCAGTTTTCACTG
GTTTAGCCCAGGAGGCAGTGGAAGTTTGCTCGCTATCTATCCAAAAAGCAAGCAAACTCG
TTGTAAAGAGATCATCACCAATGGATGGACAGCTTTTCCTTATAAAGCATCTTCTTATTT
TAAGGGAGCAGATTGCTCCATTTGATATAGAATTTTCAGTCACACACAAAGAACTTGATT
TCTCTCATTTACTGGAGCATCTAAGACGCATACTTAGGGGTCAAGCCTCACTATTCGACT
GGTCAAGATCAACCTCATTGGCAAGGACCTTATCACCTCGAGTTTTGGAAAGTCAAATAG
ATGCCAAGAAGGAACTGGAGAAAAGCCTCAAAGCCACTTGTGAGGAGTTTATTATGTCGG
TCACTAAGCTAGTTGTGGATCCCATGCTTTCATTTGTTACTAAGGTAACAGCTGTCAAAG
TTGCATTATCATCGGGCAGTCAGAATCAAAAGCTAGACTCAGTTATGGCAAAACCACTCA
AGGATCAAGCTTTTGCTACTCCTGATAAGGTGGCCGAACTTGTTCAGAAGGTAAGTGCTT
CCTTACAGCAAGAGTTGCCGAAGGTGATGGAAAAAATGAAGCTTTATCTGCAGAACCCAT
CAACAAGAACAATTCTTTTCAAGCCAATAAAGACAAATATTGTGGAAGCCCATATTCAAG
TACAATCCCTGCTGAAATCAGAATATACCCCTGAAGAGGTACAGAGCACCATCAATATGG
TGTCAATCCAAGATCTGCAAGCACAACTCGACCACCTCCTGTAGGGTTCTTGTGAAGCCT
TTAATCTCCAAAAATTTCCTCCTTGCCAATCACCTTGGCCATGCCGAACGGGTGGATTAA
GTTTCTTCACCAGAATTGAAAATCCTTGGGCTTTGCAAAGTGGATACTGAAAAAACAGTA
ATTTGAATCTATAG