Gene sequences

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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_11s0016g00330.t01
CDS Infomation	cds chromosome:12X:11:336911:338970:1 gene:VIT_11s0016g00330 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase [Source:UniProtKB/TrEMBL;Acc:F6HGZ4]
Sequence	ATGGGAAAAATAGTAGGGTGGACCCGTTTATGGCTTTTGGGGTTTGCACTTGCAGGTGCC TCCATGTCATGGGCTGCCATGGATGATGCCTATGAAAAGCGTGTCCAATCAGAGTGTGGC TTTACCACATATCCAAAGCTCTGTGTCCAGACCCTGTTGGGGTTGGGTCACTCCAAGGTT GATATTCCCTTTGTCCTTGTTAACAAGATTCTATCTGAGACCAGGCTGCCCACTTCGAAC ATTGCCAAATTCAGCTACCAGTTGGCAACCCCAGAAGCCCACTCTGCTCATCTTGTCAGA GATTCTTGTGACATGCTTATGAGCATGTCTCTGAAGCAGCTAAACCAATCACTGTTGGCT CTCAAAGAATCTGCAAGGAAAAACAAGCATGACATCCAGACATGGCTGAGTGCTGCCTTA ACTTTTCAGCAGACTTGTAAAGACTTGGCCGTGGAGATGACTCGCTACTTTGGCACCTCA ATGGTTCAGATTTCCAGCAAGATGGATCATCTATCTCAGTTGACCAACAATGCATTGGCT GTCATCAACAGAATTACCCCCGGGCCAAAGAAAACCACAAGTGGACGTGGTCTCTCTGAG GAACAAGTTTTCCCCAGCTGGGTATCACCCAGAGATCGGAAACTTCTCCAAACCACTACC ATAAAAGCAAATGCCATAGTTGCACAAGATGGAACAGGCAACTATGAGACCATTTCTGAT GCCATCCAGGCTGCCACTGGGAAACGTTTTGTGATCTATGTCAAGTCAGGAGTTTACAAG GAGAAAATTCACACCAACAAAGATGGCATCACCTTGATAGGAGACGGCAAATATTCCACT AGAATTGTTGGTGATGACAGCGTTGGTGGAGGAGCTTCCTTGCTTAGCACCGCTACGTTT ACAATCACAGGTGATGGATTCATCGCAAAGGATATAGGATTTGAAAACGCTGCAGGCCCC AAAGGAGAACAGGCTGTGGCTTTGATGGTGTCTTCAGATCATTCTGTTCTCTACAAGTGC AGCATTGCAGGCTACCAAGATACTCTGTATGCTCAGGCACTCCGGCAATTCTACAGAGAA TGCGACATTTATGGAACCATAGACTTCATTTTTGGAAATGCAGCTGCTGTTTTCCAGAAC TGCTATTTGATTCTGCGTCGCCCACTTGGTGACTCTTTCAATGTGATTTTGGCTAATGGA AGGTCCAGTCCCGGACAGAACACTGGCTTCTCTATTCAAAAATGTACAATCATACCCAGC TCTGATTTCTCTGCAGTCAAACATTCCTACAAATCCTATCTGGGGAGACCCTGGAAAGAG TATTCAAGAGCAGTTGTGATGGAATCAAGCATAGATGATGCCATTGAAGGAAGAGGGTGG ATTGAGTGGCCAGGATATGGGAGTTCAGTCCTTAAGTCTCTTTATTTTGCTGAATACTCC AACATAGGCCGTGGGGCTGCAACTTCCAGGAGAGTACAGTGGCCTGGGTTTCATCTTATT GGCACTGAAGAGGCCACTAAGTTCACTGTTGCAAACTTCATTGCTGGAACATCTTGGCTG CCCTCCACTGGAGTCATTTTCATCTCCGGCCTCCAGTAG

Peptide Sequence

PEP ID	VIT_11s0016g00330.t01
PEP Infomation	pep chromosome:12X:11:336911:338970:1 gene:VIT_11s0016g00330 transcript:VIT_11s0016g00330.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase [Source:UniProtKB/TrEMBL;Acc:F6HGZ4]
Sequence	MGKIVGWTRLWLLGFALAGASMSWAAMDDAYEKRVQSECGFTTYPKLCVQTLLGLGHSKV DIPFVLVNKILSETRLPTSNIAKFSYQLATPEAHSAHLVRDSCDMLMSMSLKQLNQSLLA LKESARKNKHDIQTWLSAALTFQQTCKDLAVEMTRYFGTSMVQISSKMDHLSQLTNNALA VINRITPGPKKTTSGRGLSEEQVFPSWVSPRDRKLLQTTTIKANAIVAQDGTGNYETISD AIQAATGKRFVIYVKSGVYKEKIHTNKDGITLIGDGKYSTRIVGDDSVGGGASLLSTATF TITGDGFIAKDIGFENAAGPKGEQAVALMVSSDHSVLYKCSIAGYQDTLYAQALRQFYRE CDIYGTIDFIFGNAAAVFQNCYLILRRPLGDSFNVILANGRSSPGQNTGFSIQKCTIIPS SDFSAVKHSYKSYLGRPWKEYSRAVVMESSIDDAIEGRGWIEWPGYGSSVLKSLYFAEYS NIGRGAATSRRVQWPGFHLIGTEEATKFTVANFIAGTSWLPSTGVIFISGLQ

Transcript Sequence

Transcript ID	VIT_11s0016g00330.t01
Transcript Infomation	cdna chromosome:12X:11:336911:338970:1 gene:VIT_11s0016g00330 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase [Source:UniProtKB/TrEMBL;Acc:F6HGZ4]
Sequence	AAGGGAGTTTGCTTCTCTGCTAAGCTATTTTTTCTAAGTTGTGAGTGCACGCAATTCTTT GATATGGGAAAAATAGTAGGGTGGACCCGTTTATGGCTTTTGGGGTTTGCACTTGCAGGT GCCTCCATGTCATGGGCTGCCATGGATGATGCCTATGAAAAGCGTGTCCAATCAGAGTGT GGCTTTACCACATATCCAAAGCTCTGTGTCCAGACCCTGTTGGGGTTGGGTCACTCCAAG GTTGATATTCCCTTTGTCCTTGTTAACAAGATTCTATCTGAGACCAGGCTGCCCACTTCG AACATTGCCAAATTCAGCTACCAGTTGGCAACCCCAGAAGCCCACTCTGCTCATCTTGTC AGAGATTCTTGTGACATGCTTATGAGCATGTCTCTGAAGCAGCTAAACCAATCACTGTTG GCTCTCAAAGAATCTGCAAGGAAAAACAAGCATGACATCCAGACATGGCTGAGTGCTGCC TTAACTTTTCAGCAGACTTGTAAAGACTTGGCCGTGGAGATGACTCGCTACTTTGGCACC TCAATGGTTCAGATTTCCAGCAAGATGGATCATCTATCTCAGTTGACCAACAATGCATTG GCTGTCATCAACAGAATTACCCCCGGGCCAAAGAAAACCACAAGTGGACGTGGTCTCTCT GAGGAACAAGTTTTCCCCAGCTGGGTATCACCCAGAGATCGGAAACTTCTCCAAACCACT ACCATAAAAGCAAATGCCATAGTTGCACAAGATGGAACAGGCAACTATGAGACCATTTCT GATGCCATCCAGGCTGCCACTGGGAAACGTTTTGTGATCTATGTCAAGTCAGGAGTTTAC AAGGAGAAAATTCACACCAACAAAGATGGCATCACCTTGATAGGAGACGGCAAATATTCC ACTAGAATTGTTGGTGATGACAGCGTTGGTGGAGGAGCTTCCTTGCTTAGCACCGCTACG TTTACAATCACAGGTGATGGATTCATCGCAAAGGATATAGGATTTGAAAACGCTGCAGGC CCCAAAGGAGAACAGGCTGTGGCTTTGATGGTGTCTTCAGATCATTCTGTTCTCTACAAG TGCAGCATTGCAGGCTACCAAGATACTCTGTATGCTCAGGCACTCCGGCAATTCTACAGA GAATGCGACATTTATGGAACCATAGACTTCATTTTTGGAAATGCAGCTGCTGTTTTCCAG AACTGCTATTTGATTCTGCGTCGCCCACTTGGTGACTCTTTCAATGTGATTTTGGCTAAT GGAAGGTCCAGTCCCGGACAGAACACTGGCTTCTCTATTCAAAAATGTACAATCATACCC AGCTCTGATTTCTCTGCAGTCAAACATTCCTACAAATCCTATCTGGGGAGACCCTGGAAA GAGTATTCAAGAGCAGTTGTGATGGAATCAAGCATAGATGATGCCATTGAAGGAAGAGGG TGGATTGAGTGGCCAGGATATGGGAGTTCAGTCCTTAAGTCTCTTTATTTTGCTGAATAC TCCAACATAGGCCGTGGGGCTGCAACTTCCAGGAGAGTACAGTGGCCTGGGTTTCATCTT ATTGGCACTGAAGAGGCCACTAAGTTCACTGTTGCAAACTTCATTGCTGGAACATCTTGG CTGCCCTCCACTGGAGTCATTTTCATCTCCGGCCTCCAGTAGTC