Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_11s0016g00290.t01
CDS Infomation	cds chromosome:12X:11:308018:311920:1 gene:VIT_11s0016g00290 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase [Source:UniProtKB/TrEMBL;Acc:F6HGZ1]
Sequence	ATGGTGAAGATTGGGGAAACATTTGGGGAGTCCGGCAAGAAGAAGAGTAGGAGGGTCTTG TTAGGAGTTAGTGCTTCTCTTGTATTCCTTCTAGTACTGGTGGTGACTGTGGCGAGAGTC TCTGTGTCTCCACACAATTCCCAACATCAAAACTGGGCAGCTCACCCCATCGTCAAATCC TCCTGCAGTGCCACTTTGTACCCAGAGCTATGCTTCTCCGCAGTGTCATCGAGGGAAGGG GAGGAAGCCAAAATCACGAAGCCAAAGGATGTGATTGAGGCGGTGTTGAACTTCACCATA ACAACAGTCCAGCACAACTACTTCACGTTGCAGCACATCATCAAAACCCGCTTAGGCCTT TCCCCGCGGGAGAAGGCTGCCCTCCACGATTGTCTGGAAATGGTGGACGACACCCTCGAC GAGCTTCACAAGTCTGCTCTTGATCTCCAGGACTATTCTCTCAACAAGTCCATATCCCAA CAAGCCGACGACCTCATCACACTGTTGAGTGCCGCCATGACCAACCAAGAAACATGCATT GATGGATTCTCCCACGATGGGGCCGACAAGAAGATTCGGAAAGGGTTGATGGATGGCCAA ATGCAGGCCTTCCGGTTGTGCAGCAACGTGCTGGCCATGATCAAGAACCTCACCGACACT GACATGGCCGCCGCAGCCTCTGCTGCTGGGCGGCAGCTTCGGGAGGAGGAGGAGGAAGCG ACTGCAACAGCAATAGAGTGGCCCGAGTGGTTGTCCGCCGGAGATCGGAGACTGTTGCAA GCGTCCACTGTGACGGCGGATGTGACGGTGGCTGCGGATGGCAGTGGAAACTATAAGACA GTGGGGGAGGCGGTGGCGTCGGCGCCGGAGAGGAGTAGTAAAAGGTACATAATAAGGATA AAAGCAGGAGTATACAAGGAAAACGTGGAGGTGCCGAAGAAGAAGACAAACATAATGTTC GTGGGAGATGGGAGGACCAATACCATCATCACCGCCAGTCGGAATGTGGTTGATGGCAGC ACAACCTTCCACTCTGCCACTGTTGCGGTGGTGGGAGACGGGTTCCTAGCGAGGGACATA ACTTTCCAGAACACAGCAGGGCCATCAAAGCACCAAGCAGTGGCACTTCGTGTGGGATCA GATCTATCGGCATTCTACAGGTGTGACGTGCTTGCATATCAGGACACCCTCTATGTTCAC TCCCTCCGCCAGTTCTTCGTCGGCTGTCTCGTTGCTGGCACTGTTGACTTCATCTTCGGA AATGCTGCTGCTGTCTTGCAGGACTGTGACATCCACGCCCGTCGCCCAAACTCAGGTCAG AGGAACATGGTCACCGCTCAAGGCCGAGATGACCCTAACCAAAACACTGGCATTGTCATC CAGAAGTGCAGGATCGGTGCAACCTCGGATCTAAAGCCCGTCCAGAGCAGCTTCCCTACT TATCTGGGGAGGCCATGGAAGGAGTACTCCAGGACCGTTGTCATGCAGACAAGTATCAGT GATGTGATCAACCCAGCTGGGTGGTACCCTTGGAATGGCAATTTTGCTCTGGACACCCTC TTCTATGCCGAGTATCAGAACACAGGGGCAGGTGCAGACACCTCCAAGAGGGTGAACTGG AAGGGCTTCAAGGTGATCACCAGTGCAAGTGAGGCCCAGGCTTTTACTGCCGGCAGTTTT ATTGGGGGAAGTAGTTGGTTGCCTTCCACCGGCTTTCCCTTCTCTCTGGGTCTCTAA

Peptide Sequence

PEP ID	VIT_11s0016g00290.t01
PEP Infomation	pep chromosome:12X:11:308018:311920:1 gene:VIT_11s0016g00290 transcript:VIT_11s0016g00290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase [Source:UniProtKB/TrEMBL;Acc:F6HGZ1]
Sequence	MVKIGETFGESGKKKSRRVLLGVSASLVFLLVLVVTVARVSVSPHNSQHQNWAAHPIVKS SCSATLYPELCFSAVSSREGEEAKITKPKDVIEAVLNFTITTVQHNYFTLQHIIKTRLGL SPREKAALHDCLEMVDDTLDELHKSALDLQDYSLNKSISQQADDLITLLSAAMTNQETCI DGFSHDGADKKIRKGLMDGQMQAFRLCSNVLAMIKNLTDTDMAAAASAAGRQLREEEEEA TATAIEWPEWLSAGDRRLLQASTVTADVTVAADGSGNYKTVGEAVASAPERSSKRYIIRI KAGVYKENVEVPKKKTNIMFVGDGRTNTIITASRNVVDGSTTFHSATVAVVGDGFLARDI TFQNTAGPSKHQAVALRVGSDLSAFYRCDVLAYQDTLYVHSLRQFFVGCLVAGTVDFIFG NAAAVLQDCDIHARRPNSGQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLKPVQSSFPT YLGRPWKEYSRTVVMQTSISDVINPAGWYPWNGNFALDTLFYAEYQNTGAGADTSKRVNW KGFKVITSASEAQAFTAGSFIGGSSWLPSTGFPFSLGL

Transcript Sequence

Transcript ID	VIT_11s0016g00290.t01
Transcript Infomation	cdna chromosome:12X:11:308018:311920:1 gene:VIT_11s0016g00290 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase [Source:UniProtKB/TrEMBL;Acc:F6HGZ1]
Sequence	TGGGTGTCCACTTTTCTTGGGGAGTTGAGTGGATAGTGATAATGGTGAAGATTGGGGAAA CATTTGGGGAGTCCGGCAAGAAGAAGAGTAGGAGGGTCTTGTTAGGAGTTAGTGCTTCTC TTGTATTCCTTCTAGTACTGGTGGTGACTGTGGCGAGAGTCTCTGTGTCTCCACACAATT CCCAACATCAAAACTGGGCAGCTCACCCCATCGTCAAATCCTCCTGCAGTGCCACTTTGT ACCCAGAGCTATGCTTCTCCGCAGTGTCATCGAGGGAAGGGGAGGAAGCCAAAATCACGA AGCCAAAGGATGTGATTGAGGCGGTGTTGAACTTCACCATAACAACAGTCCAGCACAACT ACTTCACGTTGCAGCACATCATCAAAACCCGCTTAGGCCTTTCCCCGCGGGAGAAGGCTG CCCTCCACGATTGTCTGGAAATGGTGGACGACACCCTCGACGAGCTTCACAAGTCTGCTC TTGATCTCCAGGACTATTCTCTCAACAAGTCCATATCCCAACAAGCCGACGACCTCATCA CACTGTTGAGTGCCGCCATGACCAACCAAGAAACATGCATTGATGGATTCTCCCACGATG GGGCCGACAAGAAGATTCGGAAAGGGTTGATGGATGGCCAAATGCAGGCCTTCCGGTTGT GCAGCAACGTGCTGGCCATGATCAAGAACCTCACCGACACTGACATGGCCGCCGCAGCCT CTGCTGCTGGGCGGCAGCTTCGGGAGGAGGAGGAGGAAGCGACTGCAACAGCAATAGAGT GGCCCGAGTGGTTGTCCGCCGGAGATCGGAGACTGTTGCAAGCGTCCACTGTGACGGCGG ATGTGACGGTGGCTGCGGATGGCAGTGGAAACTATAAGACAGTGGGGGAGGCGGTGGCGT CGGCGCCGGAGAGGAGTAGTAAAAGGTACATAATAAGGATAAAAGCAGGAGTATACAAGG AAAACGTGGAGGTGCCGAAGAAGAAGACAAACATAATGTTCGTGGGAGATGGGAGGACCA ATACCATCATCACCGCCAGTCGGAATGTGGTTGATGGCAGCACAACCTTCCACTCTGCCA CTGTTGCGGTGGTGGGAGACGGGTTCCTAGCGAGGGACATAACTTTCCAGAACACAGCAG GGCCATCAAAGCACCAAGCAGTGGCACTTCGTGTGGGATCAGATCTATCGGCATTCTACA GGTGTGACGTGCTTGCATATCAGGACACCCTCTATGTTCACTCCCTCCGCCAGTTCTTCG TCGGCTGTCTCGTTGCTGGCACTGTTGACTTCATCTTCGGAAATGCTGCTGCTGTCTTGC AGGACTGTGACATCCACGCCCGTCGCCCAAACTCAGGTCAGAGGAACATGGTCACCGCTC AAGGCCGAGATGACCCTAACCAAAACACTGGCATTGTCATCCAGAAGTGCAGGATCGGTG CAACCTCGGATCTAAAGCCCGTCCAGAGCAGCTTCCCTACTTATCTGGGGAGGCCATGGA AGGAGTACTCCAGGACCGTTGTCATGCAGACAAGTATCAGTGATGTGATCAACCCAGCTG GGTGGTACCCTTGGAATGGCAATTTTGCTCTGGACACCCTCTTCTATGCCGAGTATCAGA ACACAGGGGCAGGTGCAGACACCTCCAAGAGGGTGAACTGGAAGGGCTTCAAGGTGATCA CCAGTGCAAGTGAGGCCCAGGCTTTTACTGCCGGCAGTTTTATTGGGGGAAGTAGTTGGT TGCCTTCCACCGGCTTTCCCTTCTCTCTGGGTCTCTAATTCTGTTTCACTGCCATTATTT GACTAGACTCCTCCCTGTATCTCCATCTCCCAAGTATCTCCACATGCATGTATGCATGAT TTGCATCAATTTTCAGTTTCATAATAATAAAACCGCATTT