Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g00200.t01
CDS Infomation

cds chromosome:12X:11_random:230595:232286:-1 gene:VIT_11s0016g00200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A5C5K7]
Sequence

ATGGCGGATTCGGGTAAAGATTCGTGCCCGTCTTTGCTTCACGGTAAATACGAGCTGGGA
CGGCTTCTGGGTCACGGCACCTTCGCCAAGGTGTATCATGCCCGGAACTTGCAGACAGGG
AAGAGTGTAGCGATGAAAGTGGTGGGTAAGGATAAGGTGATAAAAGTGGGGATGACGGAG
CAGGTGAAGAGGGAGATATCAGTTATGAAGATGGTACAGCATCCCAATATTGTTGAGCTT
CACGAAGTCATGGCCAGCAAGTCCAAGATCTACTTCGCCATGGAGCTCGTCCGCGGCGGC
GAGCTTTTCTCCAAGATCTCCAAAGGGCGGTTGAGGGAGGACGTTGCTAGAGTGTACTTC
CAGCAGCTGATCTCGGCGGTGGACTTTTGCCACAGCCGCGGAGTCTACCACCGGGATCTG
AAGCCGGAGAATCTACTCCTCGACGAGTCTGGCAACTTGAAAGTCACCGATTTTGGGCTG
AGCGCGCTGTCAGAGCACTTGAAGCAAGATGGGCTTTTGCACACGACATGTGGGACTCCA
GCCTACGTCGCGCCCGAGGTGATTGGAAAGAATGGGTATGATGGGGCAAAGGCCGATCTG
TGGTCGTGCGGTGTGATTCTGTACGTTCTTCTCGCCGGATTCTTGCCGTTTCAGGACGAC
AACATTGTGGCCATGTATAGGAAGATCTACAGAGGAGACTTTAAGTGTCCGCCTTGGTTT
TCACCCGAATCTCGCAGACTCGTCACGAAACTCCTCGATCCAACCCCCAACACTCGAATC
ACCATAGCCAAGATCGTGGAATCCTCCTGGTTCAAAAAGTCGGTGCCCAAAACGATACTA
ACCAAAGAGGAACAAGAATTCGAGTCATTCAATTGCGGAAAAGCAAAGCAGCCGGAGACC
CTGAACGCGTTCCACATCATCTCCCTATCGGAGGGGTTCGATCTGTCACCTTTGTTCGAA
GAGAAGAAGAGAGAGCAAAAGGAGGAACTGAGGTTCGCGACGACGCAGCCAGCGAGCAGC
GTGATATCGAAACTGGAGGAGGTAGCGAAGGCAGGGAAATTCAGCGTGAAGAAGAGCGAA
ACGATAGTGAGGCTGCAGGGGCAGGAAAGAGGAAGAAAAGGGAAATTAGCGATAGGAGCG
GAGATATTCGCAGTGGCGCCGTCTTTCCTGGTGGTGGAGGTGAAGAAGCACCATGGTGAT
AGCCTGGAGTACGACCAGTTCTGCAACAAGGAGCTCCGGCCGGCTCTCAAGGACATAGTT
TGGACGTCCACCCCAGCCTGA

Peptide Sequence

PEP ID

VIT_11s0016g00200.t01
PEP Infomation

pep chromosome:12X:11_random:230595:232286:-1 gene:VIT_11s0016g00200 transcript:VIT_11s0016g00200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A5C5K7]
Sequence

MADSGKDSCPSLLHGKYELGRLLGHGTFAKVYHARNLQTGKSVAMKVVGKDKVIKVGMTE
QVKREISVMKMVQHPNIVELHEVMASKSKIYFAMELVRGGELFSKISKGRLREDVARVYF
QQLISAVDFCHSRGVYHRDLKPENLLLDESGNLKVTDFGLSALSEHLKQDGLLHTTCGTP
AYVAPEVIGKNGYDGAKADLWSCGVILYVLLAGFLPFQDDNIVAMYRKIYRGDFKCPPWF
SPESRRLVTKLLDPTPNTRITIAKIVESSWFKKSVPKTILTKEEQEFESFNCGKAKQPET
LNAFHIISLSEGFDLSPLFEEKKREQKEELRFATTQPASSVISKLEEVAKAGKFSVKKSE
TIVRLQGQERGRKGKLAIGAEIFAVAPSFLVVEVKKHHGDSLEYDQFCNKELRPALKDIV
WTSTPA

Transcript Sequence

Transcript ID

VIT_11s0016g00200.t01
Transcript Infomation

cdna chromosome:12X:11_random:230595:232286:-1 gene:VIT_11s0016g00200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A5C5K7]
Sequence

TTGCATCGCTCCGGCTAGAGTCGATAGTATTGTAATATTGTCAATTTCATTTTGTTTGAT
TTAGTTGTTTCTTGTGTATAAACAATGGCGGATTCGGGTAAAGATTCGTGCCCGTCTTTG
CTTCACGGTAAATACGAGCTGGGACGGCTTCTGGGTCACGGCACCTTCGCCAAGGTGTAT
CATGCCCGGAACTTGCAGACAGGGAAGAGTGTAGCGATGAAAGTGGTGGGTAAGGATAAG
GTGATAAAAGTGGGGATGACGGAGCAGGTGAAGAGGGAGATATCAGTTATGAAGATGGTA
CAGCATCCCAATATTGTTGAGCTTCACGAAGTCATGGCCAGCAAGTCCAAGATCTACTTC
GCCATGGAGCTCGTCCGCGGCGGCGAGCTTTTCTCCAAGATCTCCAAAGGGCGGTTGAGG
GAGGACGTTGCTAGAGTGTACTTCCAGCAGCTGATCTCGGCGGTGGACTTTTGCCACAGC
CGCGGAGTCTACCACCGGGATCTGAAGCCGGAGAATCTACTCCTCGACGAGTCTGGCAAC
TTGAAAGTCACCGATTTTGGGCTGAGCGCGCTGTCAGAGCACTTGAAGCAAGATGGGCTT
TTGCACACGACATGTGGGACTCCAGCCTACGTCGCGCCCGAGGTGATTGGAAAGAATGGG
TATGATGGGGCAAAGGCCGATCTGTGGTCGTGCGGTGTGATTCTGTACGTTCTTCTCGCC
GGATTCTTGCCGTTTCAGGACGACAACATTGTGGCCATGTATAGGAAGATCTACAGAGGA
GACTTTAAGTGTCCGCCTTGGTTTTCACCCGAATCTCGCAGACTCGTCACGAAACTCCTC
GATCCAACCCCCAACACTCGAATCACCATAGCCAAGATCGTGGAATCCTCCTGGTTCAAA
AAGTCGGTGCCCAAAACGATACTAACCAAAGAGGAACAAGAATTCGAGTCATTCAATTGC
GGAAAAGCAAAGCAGCCGGAGACCCTGAACGCGTTCCACATCATCTCCCTATCGGAGGGG
TTCGATCTGTCACCTTTGTTCGAAGAGAAGAAGAGAGAGCAAAAGGAGGAACTGAGGTTC
GCGACGACGCAGCCAGCGAGCAGCGTGATATCGAAACTGGAGGAGGTAGCGAAGGCAGGG
AAATTCAGCGTGAAGAAGAGCGAAACGATAGTGAGGCTGCAGGGGCAGGAAAGAGGAAGA
AAAGGGAAATTAGCGATAGGAGCGGAGATATTCGCAGTGGCGCCGTCTTTCCTGGTGGTG
GAGGTGAAGAAGCACCATGGTGATAGCCTGGAGTACGACCAGTTCTGCAACAAGGAGCTC
CGGCCGGCTCTCAAGGACATAGTTTGGACGTCCACCCCAGCCTGAACCATTCAACCAAAT
GACATGAAGGGTGGGTAGTGTTTGTGTCAATCCTTAAATATTAATCATTCCTCTTCATTT
CCCATCGATCCTTTGTTGTTTATTTGAATTTAGAGTATGGAGAAACTCTTTTTGGGGTCT
GCCTTTTAGTCATATTCCATGCCCATGGGGTGATGCTGTGAATAATTTTGATTGTGTGTG
GTTCTATGAATCATGGTGTGTGCTGAGTGATTCAGGAACAGTTTCAAGACATCACTGTTT
CAATGTTAAATGTGCATAATGTTTTTTTATGTAATTTGCAAATGGATTGAATGGGGAAAC
TATGTTTGTTTG