Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g00030.t01
CDS Infomation

cds chromosome:12X:11:12199:16059:-1 gene:VIT_11s0016g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATAGCAAACAACATATTGCGATATTTACTACTGCAAGTCTTCCATGGATGACTGGA
ACCGCTGTCAACCCTCTCTTCCGTGTGGCCTATCTTACAAAGGGCAGGGAGTTCAAGGTT
ACCTTGGTGATTCCCTGGCTGTCCCCGAAAGATCAAGAATTAGTATATCCCAACAAGATT
ATACTCAAGTCACCTTCAGAGCAGGAGGCATATGTCCGTCAGTGGCTCGGGGAGAGGACT
GGGTTTGTATGTGATTTCAGTATAAAATTTTATCCTGGAAAGTTTTCCAGAGATAAAAGG
AGCATTCTTGTGGTTGGGGATATTACAGAAATCATCCCTGATGAAGAGGCTGATATTGCA
GTCCTCGAGGAGCCTGAGCATCTTACATGGTATCATCATGGAAATAGATGGAAAACTAAA
TTCCGTTTGGTTGTAGGAATTGTTCATACCAATTATTTGGAATATGTTAGAAGAGAAAAG
AATGGACGGTTGCAGGCATTTCTTCTGAAATACATAAATAATTGGGTTATTGATATCTAT
TGCCACAAGGTGATTAGATTATCTGCTGCCATCCAGGACCTTCCGAGATCCATCATCTGC
AATGTTCATGGAGTCAATCCCAAGTTCCTTGAAATTGGCAAAAGAAAGAATGAGCATCAA
CAAAATGGTGACCAAGCCTTCAGTAAAGGCGCCTACTATATTGGGAAAATGGCGTGGAGC
AAAGGCTACAAGGAGCTACTCAAACTTCTTCATGATCACCAAAAGGAACTAACTGGACTT
GAGGTTGATTTATATGGCAATGGGGAGGATTCGGATCAAGTTCAGGAAGCTGCCAAAAAA
TTGGAACTAGACGTCAGAGTTCACCCTGGGCATGATCATGCTGATCCATTATTTCATGAG
TAA

Peptide Sequence

PEP ID

VIT_11s0016g00030.t01
PEP Infomation

pep chromosome:12X:11:12199:16059:-1 gene:VIT_11s0016g00030 transcript:VIT_11s0016g00030.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDSKQHIAIFTTASLPWMTGTAVNPLFRVAYLTKGREFKVTLVIPWLSPKDQELVYPNKI
ILKSPSEQEAYVRQWLGERTGFVCDFSIKFYPGKFSRDKRSILVVGDITEIIPDEEADIA
VLEEPEHLTWYHHGNRWKTKFRLVVGIVHTNYLEYVRREKNGRLQAFLLKYINNWVIDIY
CHKVIRLSAAIQDLPRSIICNVHGVNPKFLEIGKRKNEHQQNGDQAFSKGAYYIGKMAWS
KGYKELLKLLHDHQKELTGLEVDLYGNGEDSDQVQEAAKKLELDVRVHPGHDHADPLFHE

Transcript Sequence

Transcript ID

VIT_11s0016g00030.t01
Transcript Infomation

cdna chromosome:12X:11:12199:16059:-1 gene:VIT_11s0016g00030 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAAAAAACCGCCACCCTCCCCTTTTCTTTTCTTCCTTCCCAAAGCAGCCACCCGAAAGC
TACTCTCTCACCATAGGAAGCTTCCACTCTCGAGTTTTTGCCCCAATCTCCCACCTTCTT
TCATAGTTCTATTTCTTATATTCTCCGTGCATCCGTTATCAACCACAATTGTAAGGGCCA
GGATAACCTGAATTGCGATAGGGTGGAGTTGAACCTAATGAATGAATGGATAGCAAACAA
CATATTGCGATATTTACTACTGCAAGTCTTCCATGGATGACTGGAACCGCTGTCAACCCT
CTCTTCCGTGTGGCCTATCTTACAAAGGGCAGGGAGTTCAAGGTTACCTTGGTGATTCCC
TGGCTGTCCCCGAAAGATCAAGAATTAGTATATCCCAACAAGATTATACTCAAGTCACCT
TCAGAGCAGGAGGCATATGTCCGTCAGTGGCTCGGGGAGAGGACTGGGTTTGTATGTGAT
TTCAGTATAAAATTTTATCCTGGAAAGTTTTCCAGAGATAAAAGGAGCATTCTTGTGGTT
GGGGATATTACAGAAATCATCCCTGATGAAGAGGCTGATATTGCAGTCCTCGAGGAGCCT
GAGCATCTTACATGGTATCATCATGGAAATAGATGGAAAACTAAATTCCGTTTGGTTGTA
GGAATTGTTCATACCAATTATTTGGAATATGTTAGAAGAGAAAAGAATGGACGGTTGCAG
GCATTTCTTCTGAAATACATAAATAATTGGGTTATTGATATCTATTGCCACAAGGTGATT
AGATTATCTGCTGCCATCCAGGACCTTCCGAGATCCATCATCTGCAATGTTCATGGAGTC
AATCCCAAGTTCCTTGAAATTGGCAAAAGAAAGAATGAGCATCAACAAAATGGTGACCAA
GCCTTCAGTAAAGGCGCCTACTATATTGGGAAAATGGCGTGGAGCAAAGGCTACAAGGAG
CTACTCAAACTTCTTCATGATCACCAAAAGGAACTAACTGGACTTGAGGTTGATTTATAT
GGCAATGGGGAGGATTCGGATCAAGTTCAGGAAGCTGCCAAAAAATTGGAACTAGACGTC
AGAGTTCACCCTGGGCATGATCATGCTGATCCATTATTTCATGAGTAAGCTCCCTATGAT
TTATTGACATCCAGACATCAATTTAATCATTAGTTTTTTCTCTGATGGAAATAAAGAAAG
TGAAATTGCATTTGCCTTGTAATGCAATGCATCGGGCAGAAGTTGAGGGTGCTGATAACC
TTAGTTGTTGCATATTGTGCACTTTTGACTAACACTATGGTTCCCGGTACACCTAAGCTT
GGGTCTATTTGGACTCTTGGTCAATTTATTTTTCTAGCACCCAAAAGAATGCAAACATGT
GGAAATATCATCTGTTTCAATCAACCACACAAGTGTTTGTACTGAATTGATCCTGGCAGA
AAATGTTGTGCCAGTATGAATTCAGCCATGGTGAATTGCATCTTCTGACTAATGATAGCC
AGGATGATTCATAGTAACCCATTCAGGGTACATATTCTCTGGAACTACTGTTTCTTGTTT
CTCAATGTTTTCCATTTTTGCAGTTATTAACAACATTGCATACAACATTGCTATGTACTC
TATAACAGAAAAACTC