Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_10s0116g01920.t01
CDS Infomation

cds chromosome:12X:10:1173991:1176511:-1 gene:VIT_10s0116g01920 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCTCTACTGGCCAACGGCCTTCCACGGTTCTCTCCTTCCGAAACCCCGAAATTC
CCAAAAGGGTTTTGCCCTAAGCTCGAATCCCTAAAATCCCTTAACCCCAAAACCCCCAAA
AATCCTACCTCCAGTGTCTTCAAGGTTCGGGCTGATGTCGGGTTCGAATCCAAAACCATC
GATTCCGATTCTCCAACTGCTTCCCCAGGTAAGCACGCCACTTCTAGCACCGATGATAAG
CTTCAGAAAATCCTTAACCGCGATTACAAGTGGGGTTGGTTTGAAAACATCGACTCGGAT
GCGATTCCGAAAGGGCTTTCCGAGAAAACGATTCGGATGATTTCCGAGAGGAAAAATGAG
CCCGACTGGATGCTTGAATTCAGATTGAAGTCTTATGAAAAATTCCTCAAAATGAAAGAG
CCCAAGTGGTCGGACAATAGGTACCCTCCAATTGATTTTCAGGATATGTGCTATTACTCG
GAACCCAAGAAGAAGCCGAGTCTGAATAGTCTCGATGAAGCTGATCCAGAGCTTCTTAGG
TACTTTGATAAATTGGGGGTTCCTTTGAATGAGCAGAATCGATTGGCTAATGTTGCCGTT
GATGCGGTTCTTGATAGTGTATCGATAGCCACCACGCATAGAAAGACCTTAGAGAAGGCT
GGGGTGATATTCTGTTCAATATCTGAGGCAATTCGGGAGTACCCGGATTTGGTTAGGAAA
TATTTGGGAAGGGTTGTTCCCTCTGACGATAACTACTATGCAGCTCTGAACTCTGCGGTG
TTCAGTGATGGGTCATTTTGTTATGTACCAAAGGATACAAAGTGTCCTATGCAGATCTCT
ACATATTTTCGGATAAATGCACTGGAGACAGGCCAATTCGAGAGGACTTTGATAGTTGCA
GATGACAGGAGTTTTGTGGAGTACTTGGAAGGGTGTACAGCCCCTTCTTATGACAGGAAC
CAACTTCATGCAGCAGTGGTTGAACTGTATTGTGCAGAGGGTGCGGAGATTAAGTACTCC
ACAGTGCAGAATTGGTATGCTGGAGATGAGGAAGGGAGGGGAGGGATCTATAATTTTGTA
ACGAAACGGGGTCTATGCAGTGGGGCTAGATCAAAGATATCATGGACCCAGGTGGAAACA
GGGTCTGCCATAACTTGGAAGTACCCAAGTGTTGTGTTAGAGGGTGATGATACGGTTGGT
GAGTTTTATTCTGTTGCTTTGACTAATAATTATCAGCAGGCGGATACTGGGACAAAGATG
ATACACAAGGGAAAGAACACAAGAAGTAGGATTATCTCAAAGGGTATTTCGGCAGGGAAT
TCGAGGAACTGTTATAGGGGACTTGTTCAGGTTCAGTCGAAGGCCAAGAATGCTCGAAAC
TCCTCACAATGTGATTCGATGCTTATTGGTGATAATGCGGCTGCCAACACCTACCCATAC
ATTCAGGTGCAATGGACCTTTACATCAACCAAGGAGTATCTTTCAACTACTTACACACTG
GTCCTCTCTAGTACAAAAGGGAATAAATGA

Peptide Sequence

PEP ID

VIT_10s0116g01920.t01
PEP Infomation

pep chromosome:12X:10:1173991:1176511:-1 gene:VIT_10s0116g01920 transcript:VIT_10s0116g01920.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASLLANGLPRFSPSETPKFPKGFCPKLESLKSLNPKTPKNPTSSVFKVRADVGFESKTI
DSDSPTASPGKHATSSTDDKLQKILNRDYKWGWFENIDSDAIPKGLSEKTIRMISERKNE
PDWMLEFRLKSYEKFLKMKEPKWSDNRYPPIDFQDMCYYSEPKKKPSLNSLDEADPELLR
YFDKLGVPLNEQNRLANVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIREYPDLVRK
YLGRVVPSDDNYYAALNSAVFSDGSFCYVPKDTKCPMQISTYFRINALETGQFERTLIVA
DDRSFVEYLEGCTAPSYDRNQLHAAVVELYCAEGAEIKYSTVQNWYAGDEEGRGGIYNFV
TKRGLCSGARSKISWTQVETGSAITWKYPSVVLEGDDTVGEFYSVALTNNYQQADTGTKM
IHKGKNTRSRIISKGISAGNSRNCYRGLVQVQSKAKNARNSSQCDSMLIGDNAAANTYPY
IQVQWTFTSTKEYLSTTYTLVLSSTKGNK

Transcript Sequence

Transcript ID

VIT_10s0116g01920.t01
Transcript Infomation

cdna chromosome:12X:10:1173991:1176511:-1 gene:VIT_10s0116g01920 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGGAGATTCAGAAAGTGTCTCCTTGAACCTCATCCATGGCTTCTCTACTGGCCAACGGCC
TTCCACGGTTCTCTCCTTCCGAAACCCCGAAATTCCCAAAAGGGTTTTGCCCTAAGCTCG
AATCCCTAAAATCCCTTAACCCCAAAACCCCCAAAAATCCTACCTCCAGTGTCTTCAAGG
TTCGGGCTGATGTCGGGTTCGAATCCAAAACCATCGATTCCGATTCTCCAACTGCTTCCC
CAGGTAAGCACGCCACTTCTAGCACCGATGATAAGCTTCAGAAAATCCTTAACCGCGATT
ACAAGTGGGGTTGGTTTGAAAACATCGACTCGGATGCGATTCCGAAAGGGCTTTCCGAGA
AAACGATTCGGATGATTTCCGAGAGGAAAAATGAGCCCGACTGGATGCTTGAATTCAGAT
TGAAGTCTTATGAAAAATTCCTCAAAATGAAAGAGCCCAAGTGGTCGGACAATAGGTACC
CTCCAATTGATTTTCAGGATATGTGCTATTACTCGGAACCCAAGAAGAAGCCGAGTCTGA
ATAGTCTCGATGAAGCTGATCCAGAGCTTCTTAGGTACTTTGATAAATTGGGGGTTCCTT
TGAATGAGCAGAATCGATTGGCTAATGTTGCCGTTGATGCGGTTCTTGATAGTGTATCGA
TAGCCACCACGCATAGAAAGACCTTAGAGAAGGCTGGGGTGATATTCTGTTCAATATCTG
AGGCAATTCGGGAGTACCCGGATTTGGTTAGGAAATATTTGGGAAGGGTTGTTCCCTCTG
ACGATAACTACTATGCAGCTCTGAACTCTGCGGTGTTCAGTGATGGGTCATTTTGTTATG
TACCAAAGGATACAAAGTGTCCTATGCAGATCTCTACATATTTTCGGATAAATGCACTGG
AGACAGGCCAATTCGAGAGGACTTTGATAGTTGCAGATGACAGGAGTTTTGTGGAGTACT
TGGAAGGGTGTACAGCCCCTTCTTATGACAGGAACCAACTTCATGCAGCAGTGGTTGAAC
TGTATTGTGCAGAGGGTGCGGAGATTAAGTACTCCACAGTGCAGAATTGGTATGCTGGAG
ATGAGGAAGGGAGGGGAGGGATCTATAATTTTGTAACGAAACGGGGTCTATGCAGTGGGG
CTAGATCAAAGATATCATGGACCCAGGTGGAAACAGGGTCTGCCATAACTTGGAAGTACC
CAAGTGTTGTGTTAGAGGGTGATGATACGGTTGGTGAGTTTTATTCTGTTGCTTTGACTA
ATAATTATCAGCAGGCGGATACTGGGACAAAGATGATACACAAGGGAAAGAACACAAGAA
GTAGGATTATCTCAAAGGGTATTTCGGCAGGGAATTCGAGGAACTGTTATAGGGGACTTG
TTCAGGTTCAGTCGAAGGCCAAGAATGCTCGAAACTCCTCACAATGTGATTCGATGCTTA
TTGGTGATAATGCGGCTGCCAACACCTACCCATACATTCAGGTGCAATGGACCTTTACAT
CAACCAAGGAGTATCTTTCAACTACTTACACACTGGTCCTCTCTAGTACAAAAGGGAATA
AATGA